RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 ADAM23O75077 832 aa20.33■□□□□ 0.85
TRAPPC3-204ENST00000373166 OAS1P00973 400 aaKnown RBP20.33■□□□□ 0.85
TRAPPC3-204ENST00000373166 CHRM1P11229 460 aaPredicted RBP20.33■□□□□ 0.85
TRAPPC3-204ENST00000373166 KRT13P13646 458 aa20.33■□□□□ 0.85
TRAPPC3-204ENST00000373166 ITPKAP23677 461 aa20.33■□□□□ 0.85
TRAPPC3-204ENST00000373166 MYL6P60660 151 aa20.33■□□□□ 0.85
TRAPPC3-204ENST00000373166 GFPT1Q06210 699 aaPredicted RBP20.33■□□□□ 0.85
TRAPPC3-204ENST00000373166 RING1Q06587 406 aa20.33■□□□□ 0.85
TRAPPC3-204ENST00000373166 ADAM9Q13443 819 aa20.33■□□□□ 0.85
TRAPPC3-204ENST00000373166 NCOA4Q13772 614 aa20.33■□□□□ 0.85
TRAPPC3-204ENST00000373166 DUOXA1Q1HG43 343 aa20.33■□□□□ 0.85
TRAPPC3-204ENST00000373166 ZNF699Q32M78 642 aa20.33■□□□□ 0.85
TRAPPC3-204ENST00000373166 WDR72Q3MJ13 1102 aa20.33■□□□□ 0.85
TRAPPC3-204ENST00000373166 ZCWPW2Q504Y3 356 aa20.33■□□□□ 0.85
TRAPPC3-204ENST00000373166 PEAR1Q5VY43 1037 aaPredicted RBP20.33■□□□□ 0.85
TRAPPC3-204ENST00000373166 INTS8Q75QN2 995 aaKnown RBP20.33■□□□□ 0.85
TRAPPC3-204ENST00000373166 C12orf40Q86WS4 652 aa20.33■□□□□ 0.85
TRAPPC3-204ENST00000373166 ELOA2Q8IYF1 753 aaPredicted RBP20.33■□□□□ 0.85
TRAPPC3-204ENST00000373166 FAM186BQ8IYM0 893 aa20.33■□□□□ 0.85
TRAPPC3-204ENST00000373166 SPATA20Q8TB22 786 aa20.33■□□□□ 0.85
TRAPPC3-204ENST00000373166 ERCC4Q92889 916 aaPredicted RBP20.33■□□□□ 0.85
TRAPPC3-204ENST00000373166 SLITRK1Q96PX8 696 aa20.33■□□□□ 0.85
TRAPPC3-204ENST00000373166 TSG101Q99816 390 aa20.33■□□□□ 0.85
TRAPPC3-204ENST00000373166 GTPBP2Q9BX10 602 aaKnown RBP20.33■□□□□ 0.85
TRAPPC3-204ENST00000373166 SNX25Q9H3E2 840 aa20.33■□□□□ 0.85
TRAPPC3-204ENST00000373166 KLK13Q9UKR3 277 aa20.33■□□□□ 0.85
TRAPPC3-204ENST00000373166 LHX6Q9UPM6 363 aa20.33■□□□□ 0.85
TRAPPC3-204ENST00000373166 ATXN2Q99700 1313 aaKnown RBP20.32■□□□□ 0.84
TRAPPC3-204ENST00000373166 THADAQ6YHU6 1953 aa20.32■□□□□ 0.84
TRAPPC3-204ENST00000373166 GADD45BO75293 160 aaPredicted RBP20.32■□□□□ 0.84
TRAPPC3-204ENST00000373166 MBL2P11226 248 aaPredicted RBP20.32■□□□□ 0.84
TRAPPC3-204ENST00000373166 PSMC2P35998 433 aaKnown RBP20.32■□□□□ 0.84
TRAPPC3-204ENST00000373166 VAMP7P51809 220 aa20.32■□□□□ 0.84
TRAPPC3-204ENST00000373166 DLG4P78352 724 aa20.32■□□□□ 0.84
TRAPPC3-204ENST00000373166 KDSRQ06136 332 aa20.32■□□□□ 0.84
TRAPPC3-204ENST00000373166 TAF10Q12962 218 aa20.32■□□□□ 0.84
TRAPPC3-204ENST00000373166 PREPLQ4J6C6 727 aaPredicted RBP20.32■□□□□ 0.84
TRAPPC3-204ENST00000373166 COBLL1Q53SF7 1204 aa20.32■□□□□ 0.84
TRAPPC3-204ENST00000373166 MDH1BQ5I0G3 518 aa20.32■□□□□ 0.84
TRAPPC3-204ENST00000373166 SLC36A4Q6YBV0 504 aa20.32■□□□□ 0.84
TRAPPC3-204ENST00000373166 TRMT11Q7Z4G4 463 aaKnown RBP20.32■□□□□ 0.84
TRAPPC3-204ENST00000373166 RABEPKQ7Z6M1 372 aa20.32■□□□□ 0.84
TRAPPC3-204ENST00000373166 KCNV2Q8TDN2 545 aa20.32■□□□□ 0.84
TRAPPC3-204ENST00000373166 ZDHHC4Q9NPG8 344 aa20.32■□□□□ 0.84
TRAPPC3-204ENST00000373166 NXF1Q9UBU9 619 aaKnown RBP20.32■□□□□ 0.84
TRAPPC3-204ENST00000373166 NUP205Q92621 2012 aa20.32■□□□□ 0.84
TRAPPC3-204ENST00000373166 KIAA1549LQ6ZVL6 1849 aa20.32■□□□□ 0.84
TRAPPC3-204ENST00000373166 DMXL2Q8TDJ6 3036 aa20.32■□□□□ 0.84
TRAPPC3-204ENST00000373166 E2F8A0AVK6 867 aa20.31■□□□□ 0.84
TRAPPC3-204ENST00000373166 TBC1D3BA6NDS4 549 aa20.31■□□□□ 0.84
TRAPPC3-204ENST00000373166 IKBKBO14920 756 aa20.31■□□□□ 0.84
TRAPPC3-204ENST00000373166 OPHN1O60890 802 aa20.31■□□□□ 0.84
TRAPPC3-204ENST00000373166 TACC1O75410 805 aa20.31■□□□□ 0.84
TRAPPC3-204ENST00000373166 C4BPAP04003 597 aaKnown RBP20.31■□□□□ 0.84
TRAPPC3-204ENST00000373166 SERPINF2P08697 491 aa20.31■□□□□ 0.84
TRAPPC3-204ENST00000373166 GNL1P36915 607 aaPredicted RBP20.31■□□□□ 0.84
TRAPPC3-204ENST00000373166 PRCPP42785 496 aa20.31■□□□□ 0.84
TRAPPC3-204ENST00000373166 RPL6Q02878 288 aaKnown RBP20.31■□□□□ 0.84
TRAPPC3-204ENST00000373166 GAD2Q05329 585 aa20.31■□□□□ 0.84
TRAPPC3-204ENST00000373166 STIM1Q13586 685 aa20.31■□□□□ 0.84
TRAPPC3-204ENST00000373166 ZACNQ401N2 412 aa20.31■□□□□ 0.84
TRAPPC3-204ENST00000373166 ZNF667Q5HYK9 610 aa20.31■□□□□ 0.84
TRAPPC3-204ENST00000373166 LY6G5CQ5SRR4 150 aa20.31■□□□□ 0.84
TRAPPC3-204ENST00000373166 BTBD8Q5XKL5 378 aa20.31■□□□□ 0.84
TRAPPC3-204ENST00000373166 NUDT18Q6ZVK8 323 aa20.31■□□□□ 0.84
TRAPPC3-204ENST00000373166 OR6B3Q8NGW1 331 aa20.31■□□□□ 0.84
TRAPPC3-204ENST00000373166 OTUB2Q96DC9 234 aa20.31■□□□□ 0.84
TRAPPC3-204ENST00000373166 XYLT2Q9H1B5 865 aa20.31■□□□□ 0.84
TRAPPC3-204ENST00000373166 MYO16Q9Y6X6 1858 aa20.3■□□□□ 0.84
TRAPPC3-204ENST00000373166 PKD1L2Q7Z442 2459 aa20.3■□□□□ 0.84
TRAPPC3-204ENST00000373166 CETN3O15182 167 aa20.3■□□□□ 0.84
TRAPPC3-204ENST00000373166 FAM163BP0C2L3 166 aa20.3■□□□□ 0.84
TRAPPC3-204ENST00000373166 PIK3CAP42336 1068 aa20.3■□□□□ 0.84
TRAPPC3-204ENST00000373166 UBE2HP62256 183 aa20.3■□□□□ 0.84
TRAPPC3-204ENST00000373166 ENPEPQ07075 957 aa20.3■□□□□ 0.84
TRAPPC3-204ENST00000373166 MRPL45Q9BRJ2 306 aaKnown RBP20.3■□□□□ 0.84
TRAPPC3-204ENST00000373166 ELOVL4Q9GZR5 314 aa20.3■□□□□ 0.84
TRAPPC3-204ENST00000373166 VRTNQ9H8Y1 702 aa20.3■□□□□ 0.84
TRAPPC3-204ENST00000373166 FSCN3Q9NQT6 498 aa20.3■□□□□ 0.84
TRAPPC3-204ENST00000373166 DEC1Q9P2X7 70 aa20.3■□□□□ 0.84
TRAPPC3-204ENST00000373166 DSPP15924 2871 aaKnown RBP20.29■□□□□ 0.84
TRAPPC3-204ENST00000373166 FAM221BA6H8Z2 402 aa20.29■□□□□ 0.84
TRAPPC3-204ENST00000373166 PSMA7O14818 248 aa20.29■□□□□ 0.84
TRAPPC3-204ENST00000373166 ZBTB24O43167 697 aaPredicted RBP20.29■□□□□ 0.84
TRAPPC3-204ENST00000373166 VNN1O95497 513 aa20.29■□□□□ 0.84
TRAPPC3-204ENST00000373166 TRIM49P0CI25 452 aa20.29■□□□□ 0.84
TRAPPC3-204ENST00000373166 TRIM49CP0CI26 452 aa20.29■□□□□ 0.84
TRAPPC3-204ENST00000373166 EPB41P11171 864 aaKnown RBP20.29■□□□□ 0.84
TRAPPC3-204ENST00000373166 P4HA1P13674 534 aa20.29■□□□□ 0.84
TRAPPC3-204ENST00000373166 YWHAQP27348 245 aa20.29■□□□□ 0.84
TRAPPC3-204ENST00000373166 PPP1R2P41236 205 aa20.29■□□□□ 0.84
TRAPPC3-204ENST00000373166 IFRD2Q12894 506 aaPredicted RBP20.29■□□□□ 0.84
TRAPPC3-204ENST00000373166 HNRNPDQ14103 355 aaKnown RBP20.29■□□□□ 0.84
TRAPPC3-204ENST00000373166 SV2AQ7L0J3 742 aa20.29■□□□□ 0.84
TRAPPC3-204ENST00000373166 PHTF2Q8N3S3 785 aa20.29■□□□□ 0.84
TRAPPC3-204ENST00000373166 DEFB119Q8N690 84 aa20.29■□□□□ 0.84
TRAPPC3-204ENST00000373166 ZNF513Q8N8E2 541 aaPredicted RBP20.29■□□□□ 0.84
TRAPPC3-204ENST00000373166 NAT16Q8N8M0 369 aa20.29■□□□□ 0.84
TRAPPC3-204ENST00000373166 PDZD8Q8NEN9 1154 aa20.29■□□□□ 0.84
TRAPPC3-204ENST00000373166 TAF4BQ92750 862 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms