RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 CCL16O15467 120 aa16.58■□□□□ 0.24
TMEM53-204ENST00000372243 GRAP2O75791 330 aa16.58■□□□□ 0.24
TMEM53-204ENST00000372243 FGF19O95750 216 aa16.58■□□□□ 0.24
TMEM53-204ENST00000372243 GLP2RO95838 553 aa16.58■□□□□ 0.24
TMEM53-204ENST00000372243 F11P03951 625 aa16.58■□□□□ 0.24
TMEM53-204ENST00000372243 PDGFRAP16234 1089 aa16.58■□□□□ 0.24
TMEM53-204ENST00000372243 GPD1P21695 349 aa16.58■□□□□ 0.24
TMEM53-204ENST00000372243 PTPN9P43378 593 aa16.58■□□□□ 0.24
TMEM53-204ENST00000372243 ZNF143P52747 638 aaPredicted RBP16.58■□□□□ 0.24
TMEM53-204ENST00000372243 NAP1L1P55209 391 aaKnown RBP16.58■□□□□ 0.24
TMEM53-204ENST00000372243 ADAM15Q13444 863 aa16.58■□□□□ 0.24
TMEM53-204ENST00000372243 PIGHQ14442 188 aaPredicted RBP16.58■□□□□ 0.24
TMEM53-204ENST00000372243 ACAP1Q15027 740 aa16.58■□□□□ 0.24
TMEM53-204ENST00000372243 TMC8Q8IU68 726 aa16.58■□□□□ 0.24
TMEM53-204ENST00000372243 DEFB106AQ8N104 65 aa16.58■□□□□ 0.24
TMEM53-204ENST00000372243 EMC1Q8N766 993 aa16.58■□□□□ 0.24
TMEM53-204ENST00000372243 NIPA2Q8N8Q9 360 aa16.58■□□□□ 0.24
TMEM53-204ENST00000372243 TRIM58Q8NG06 486 aa16.58■□□□□ 0.24
TMEM53-204ENST00000372243 UBE2Q2Q8WVN8 375 aa16.58■□□□□ 0.24
TMEM53-204ENST00000372243 RXFP2Q8WXD0 754 aa16.58■□□□□ 0.24
TMEM53-204ENST00000372243 NT5C3BQ969T7 300 aa16.58■□□□□ 0.24
TMEM53-204ENST00000372243 ZNF707Q96C28 371 aaPredicted RBP16.58■□□□□ 0.24
TMEM53-204ENST00000372243 IL21Q9HBE4 155 aa16.58■□□□□ 0.24
TMEM53-204ENST00000372243 TRPM5Q9NZQ8 1165 aa16.58■□□□□ 0.24
TMEM53-204ENST00000372243 PAXBP1Q9Y5B6 917 aa16.58■□□□□ 0.24
TMEM53-204ENST00000372243 CAPN9O14815 690 aa16.57■□□□□ 0.24
TMEM53-204ENST00000372243 MOCS3O95396 460 aa16.57■□□□□ 0.24
TMEM53-204ENST00000372243 NCAM1P13591 858 aa16.57■□□□□ 0.24
TMEM53-204ENST00000372243 SDC4P31431 198 aa16.57■□□□□ 0.24
TMEM53-204ENST00000372243 TUBP50607 506 aa16.57■□□□□ 0.24
TMEM53-204ENST00000372243 RBM10P98175 930 aaKnown RBP16.57■□□□□ 0.24
TMEM53-204ENST00000372243 OGDHQ02218 1023 aa16.57■□□□□ 0.24
TMEM53-204ENST00000372243 COL19A1Q14993 1142 aa16.57■□□□□ 0.24
TMEM53-204ENST00000372243 TRNP1Q6NT89 227 aa16.57■□□□□ 0.24
TMEM53-204ENST00000372243 C11orf63Q6NUN7 778 aa16.57■□□□□ 0.24
TMEM53-204ENST00000372243 C17orf53Q8N3J3 647 aaPredicted RBP16.57■□□□□ 0.24
TMEM53-204ENST00000372243 CDK5RAP1Q96SZ6 601 aaKnown RBP16.57■□□□□ 0.24
TMEM53-204ENST00000372243 CNPY3Q9BT09 278 aa16.57■□□□□ 0.24
TMEM53-204ENST00000372243 TRIM7Q9C029 511 aa16.57■□□□□ 0.24
TMEM53-204ENST00000372243 ZNF334Q9HCZ1 680 aaPredicted RBP16.57■□□□□ 0.24
TMEM53-204ENST00000372243 ASAH2Q9NR71 780 aa16.57■□□□□ 0.24
TMEM53-204ENST00000372243 OLA1Q9NTK5 396 aaKnown RBP16.57■□□□□ 0.24
TMEM53-204ENST00000372243 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.57■□□□□ 0.24
TMEM53-204ENST00000372243 OSER1Q9NX31 292 aa16.57■□□□□ 0.24
TMEM53-204ENST00000372243 STAP1Q9ULZ2 295 aa16.57■□□□□ 0.24
TMEM53-204ENST00000372243 ZNF840PA6NDX5 716 aa16.56■□□□□ 0.24
TMEM53-204ENST00000372243 KIF5CO60282 957 aa16.56■□□□□ 0.24
TMEM53-204ENST00000372243 BUB1BO60566 1050 aaPredicted RBP16.56■□□□□ 0.24
TMEM53-204ENST00000372243 PROSCO94903 275 aa16.56■□□□□ 0.24
TMEM53-204ENST00000372243 RALAP11233 206 aa16.56■□□□□ 0.24
TMEM53-204ENST00000372243 HOXB8P17481 243 aaPredicted RBP16.56■□□□□ 0.24
TMEM53-204ENST00000372243 DESP17661 470 aa16.56■□□□□ 0.24
TMEM53-204ENST00000372243 CDC25CP30307 473 aa16.56■□□□□ 0.24
TMEM53-204ENST00000372243 MAN1A1P33908 653 aa16.56■□□□□ 0.24
TMEM53-204ENST00000372243 SLC1A1P43005 524 aa16.56■□□□□ 0.24
TMEM53-204ENST00000372243 PGFP49763 221 aa16.56■□□□□ 0.24
TMEM53-204ENST00000372243 ZNF252P-AS1Q0IIN9 211 aa16.56■□□□□ 0.24
TMEM53-204ENST00000372243 CTC1Q2NKJ3 1217 aa16.56■□□□□ 0.24
TMEM53-204ENST00000372243 SLC25A52Q3SY17 297 aa16.56■□□□□ 0.24
TMEM53-204ENST00000372243 CCDC14Q49A88 953 aa16.56■□□□□ 0.24
TMEM53-204ENST00000372243 DCAF6Q58WW2 860 aa16.56■□□□□ 0.24
TMEM53-204ENST00000372243 HABP4Q5JVS0 413 aaKnown RBP16.56■□□□□ 0.24
TMEM53-204ENST00000372243 SYPL2Q5VXT5 272 aa16.56■□□□□ 0.24
TMEM53-204ENST00000372243 ANKRD54Q6NXT1 300 aa16.56■□□□□ 0.24
TMEM53-204ENST00000372243 SLFN11Q7Z7L1 901 aa16.56■□□□□ 0.24
TMEM53-204ENST00000372243 TMEM150AQ86TG1 271 aa16.56■□□□□ 0.24
TMEM53-204ENST00000372243 SYCE1Q8N0S2 351 aa16.56■□□□□ 0.24
TMEM53-204ENST00000372243 LRRC57Q8N9N7 239 aa16.56■□□□□ 0.24
TMEM53-204ENST00000372243 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.56■□□□□ 0.24
TMEM53-204ENST00000372243 ALS2CR12Q96Q35 445 aa16.56■□□□□ 0.24
TMEM53-204ENST00000372243 NPY6RQ99463 290 aa16.56■□□□□ 0.24
TMEM53-204ENST00000372243 NCAPGQ9BPX3 1015 aa16.56■□□□□ 0.24
TMEM53-204ENST00000372243 CORO1BQ9BR76 489 aa16.56■□□□□ 0.24
TMEM53-204ENST00000372243 TMEM51Q9NW97 253 aa16.56■□□□□ 0.24
TMEM53-204ENST00000372243 DNMT3BQ9UBC3 853 aaKnown RBP16.56■□□□□ 0.24
TMEM53-204ENST00000372243 NAALADL1Q9UQQ1 740 aa16.56■□□□□ 0.24
TMEM53-204ENST00000372243 CAPN6Q9Y6Q1 641 aa16.56■□□□□ 0.24
TMEM53-204ENST00000372243 GRID2IPA4D2P6 1211 aa16.55■□□□□ 0.24
TMEM53-204ENST00000372243 TADA3O75528 432 aa16.55■□□□□ 0.24
TMEM53-204ENST00000372243 ENDOD1O94919 500 aa16.55■□□□□ 0.24
TMEM53-204ENST00000372243 RARGP13631 454 aa16.55■□□□□ 0.24
TMEM53-204ENST00000372243 IGFBP4P22692 258 aa16.55■□□□□ 0.24
TMEM53-204ENST00000372243 PSMA2P25787 234 aa16.55■□□□□ 0.24
TMEM53-204ENST00000372243 GABRR2P28476 465 aa16.55■□□□□ 0.24
TMEM53-204ENST00000372243 MESDQ14696 234 aa16.55■□□□□ 0.24
TMEM53-204ENST00000372243 MSANTD2Q6P1R3 559 aa16.55■□□□□ 0.24
TMEM53-204ENST00000372243 STRADAQ7RTN6 431 aa16.55■□□□□ 0.24
TMEM53-204ENST00000372243 BNIPLQ7Z465 357 aa16.55■□□□□ 0.24
TMEM53-204ENST00000372243 TADA2BQ86TJ2 420 aa16.55■□□□□ 0.24
TMEM53-204ENST00000372243 HS6ST3Q8IZP7 471 aa16.55■□□□□ 0.24
TMEM53-204ENST00000372243 EDEM1Q92611 657 aa16.55■□□□□ 0.24
TMEM53-204ENST00000372243 CENPIQ92674 756 aaPredicted RBP16.55■□□□□ 0.24
TMEM53-204ENST00000372243 PGAP3Q96FM1 320 aaPredicted RBP16.55■□□□□ 0.24
TMEM53-204ENST00000372243 BTBD6Q96KE9 485 aa16.55■□□□□ 0.24
TMEM53-204ENST00000372243 CFAP57Q96MR6 1250 aa16.55■□□□□ 0.24
TMEM53-204ENST00000372243 FAM161BQ96MY7 647 aa16.55■□□□□ 0.24
TMEM53-204ENST00000372243 IRX2Q9BZI1 471 aaPredicted RBP16.55■□□□□ 0.24
TMEM53-204ENST00000372243 OBSL1O75147 1896 aa16.55■□□□□ 0.24
TMEM53-204ENST00000372243 PRRC2BQ5JSZ5 2229 aaKnown RBP16.55■□□□□ 0.24
TMEM53-204ENST00000372243 SOBPA7XYQ1 873 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms