RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 DCAKDQ8WVC6 231 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 USP13Q92995 863 aaPredicted RBP6.81□□□□□ -1.32
CSDE1-203ENST00000358528 TMA16Q96EY4 203 aaKnown RBP6.81□□□□□ -1.32
CSDE1-203ENST00000358528 TUBGCP5Q96RT8 1024 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 PPM1HQ9ULR3 514 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 MRPL42Q9Y6G3 142 aaKnown RBP6.81□□□□□ -1.32
CSDE1-203ENST00000358528 SNCAIPQ9Y6H5 919 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 DCAF8L1A6NGE4 600 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 LIN7AO14910 233 aaPredicted RBP6.81□□□□□ -1.32
CSDE1-203ENST00000358528 DNAJC6O75061 913 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 USP12O75317 370 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 LYNP07948 512 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 GSTA2P09210 222 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 ACO1P21399 889 aaKnown RBP6.81□□□□□ -1.32
CSDE1-203ENST00000358528 SOX11P35716 441 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 NUDT2P50583 147 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 CLCN3P51790 818 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 GTF2A2P52657 109 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 ART3Q13508 389 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 OASLQ15646 514 aaKnown RBP6.81□□□□□ -1.32
CSDE1-203ENST00000358528 CDCA2Q69YH5 1023 aaPredicted RBP6.81□□□□□ -1.32
CSDE1-203ENST00000358528 CWF19L1Q69YN2 538 aaKnown RBP6.81□□□□□ -1.32
CSDE1-203ENST00000358528 BBS12Q6ZW61 710 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 STKLD1Q8NE28 680 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 RNF217Q8TC41 542 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 FAM172AQ8WUF8 416 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 NRG4Q8WWG1 115 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 NKD2Q969F2 451 aaPredicted RBP6.81□□□□□ -1.32
CSDE1-203ENST00000358528 ECSITQ9BQ95 431 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 APOL2Q9BQE5 337 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 RNPEPQ9H4A4 650 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 STX18Q9P2W9 335 aaKnown RBP6.81□□□□□ -1.32
CSDE1-203ENST00000358528 SOX13Q9UN79 622 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 ATRNL1Q5VV63 1379 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 WDR27A2RRH5 827 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 TTLL13PA6NNM8 815 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 GOLGA8TH3BQL2 631 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 APOC4-APOC2K7ER74 178 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 OGTO15294 1046 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 MAP3K13O43283 966 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 APOC2P02655 101 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 PDGFRBP09619 1106 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 RAG1P15918 1043 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 GMPRP36959 345 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 ARL4AP40617 200 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 NAMPTP43490 491 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 PTP4A2Q12974 167 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 DYNC1I2Q13409 638 aaKnown RBP6.81□□□□□ -1.32
CSDE1-203ENST00000358528 CCDC14Q49A88 953 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 SH2D4BQ5SQS7 431 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 VSIG10LQ86VR7 867 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 MFN1Q8IWA4 741 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 SCUBE3Q8IX30 993 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 SLC44A1Q8WWI5 657 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 LPAR1Q92633 364 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 HIC2Q96JB3 615 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 ACAD9Q9H845 621 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 PNPOQ9NVS9 261 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 ADA2Q9NZK5 511 aa6.81□□□□□ -1.32
CSDE1-203ENST00000358528 MYO18AQ92614 2054 aaKnown RBP6.8□□□□□ -1.32
CSDE1-203ENST00000358528 A0A1B0GVG6 124 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 MAGEB2O15479 319 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 GARSP41250 739 aaKnown RBP6.8□□□□□ -1.32
CSDE1-203ENST00000358528 PHKA2P46019 1235 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 GLRBP48167 497 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 SLC1A6P48664 564 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 PTPN11Q06124 597 aaPredicted RBP6.8□□□□□ -1.32
CSDE1-203ENST00000358528 ZNF252P-AS1Q0IIN9 211 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 IFRD2Q12894 506 aaPredicted RBP6.8□□□□□ -1.32
CSDE1-203ENST00000358528 TNFAIP1Q13829 316 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 TCEAL1Q15170 157 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 RAB6CQ53S08 254 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 ATF7IP2Q5U623 682 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 GADL1Q6ZQY3 521 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 NIPA1Q7RTP0 329 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 TAS1R3Q7RTX0 852 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 PID1Q7Z2X4 250 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 KDELC2Q7Z4H8 507 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 ZNF354CQ86Y25 554 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 TNS4Q8IZW8 715 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 ZNF398Q8TD17 642 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 SNRNP27Q8WVK2 155 aaKnown RBP6.8□□□□□ -1.32
CSDE1-203ENST00000358528 GPRASP2Q96D09 838 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 RAB6CQ9H0N0 254 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 ST6GALNAC4Q9H4F1 302 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 EBF3Q9H4W6 596 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 KLHL8Q9P2G9 620 aaPredicted RBP6.8□□□□□ -1.32
CSDE1-203ENST00000358528 SLC7A8Q9UHI5 535 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 TRPC5Q9UL62 973 aaPredicted RBP6.8□□□□□ -1.32
CSDE1-203ENST00000358528 SNX9Q9Y5X1 595 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 ZNF536O15090 1300 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 A6NHS1 94 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 A8MXQ7 604 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 VWA5AO00534 786 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 B4GALT5O43286 388 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 MICAL2O94851 1124 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 LYPLA2O95372 231 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 ASS1P00966 412 aaKnown RBP6.8□□□□□ -1.32
CSDE1-203ENST00000358528 APOEP02649 317 aa6.8□□□□□ -1.32
CSDE1-203ENST00000358528 ERBB2P04626 1255 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms