RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 SREBF2Q12772 1141 aa11.06□□□□□ -0.64
CAPN3-205ENST00000357568 CYLC2Q14093 348 aaPredicted RBP11.06□□□□□ -0.64
CAPN3-205ENST00000357568 PSMD6Q15008 389 aa11.06□□□□□ -0.64
CAPN3-205ENST00000357568 ZACNQ401N2 412 aa11.06□□□□□ -0.64
CAPN3-205ENST00000357568 MMEL1Q495T6 779 aa11.06□□□□□ -0.64
CAPN3-205ENST00000357568 SFT2D3Q587I9 215 aa11.06□□□□□ -0.64
CAPN3-205ENST00000357568 CAPN12Q6ZSI9 719 aa11.06□□□□□ -0.64
CAPN3-205ENST00000357568 SAMD3Q8N6K7 520 aa11.06□□□□□ -0.64
CAPN3-205ENST00000357568 ACER1Q8TDN7 264 aa11.06□□□□□ -0.64
CAPN3-205ENST00000357568 DIS3LQ8TF46 1054 aaKnown RBP11.06□□□□□ -0.64
CAPN3-205ENST00000357568 CCDC127Q96BQ5 260 aa11.06□□□□□ -0.64
CAPN3-205ENST00000357568 MPP4Q96JB8 637 aa11.06□□□□□ -0.64
CAPN3-205ENST00000357568 MS4A4AQ96JQ5 239 aa11.06□□□□□ -0.64
CAPN3-205ENST00000357568 CAPNS2Q96L46 248 aa11.06□□□□□ -0.64
CAPN3-205ENST00000357568 RBM38Q9H0Z9 239 aaKnown RBP11.06□□□□□ -0.64
CAPN3-205ENST00000357568 TBCCD1Q9NVR7 557 aa11.06□□□□□ -0.64
CAPN3-205ENST00000357568 USTQ9Y2C2 406 aa11.06□□□□□ -0.64
CAPN3-205ENST00000357568 MAD1L1Q9Y6D9 718 aa11.06□□□□□ -0.64
CAPN3-205ENST00000357568 TEX264Q9Y6I9 313 aa11.06□□□□□ -0.64
CAPN3-205ENST00000357568 TCRBV9S1A1TA0A576 114 aa11.05□□□□□ -0.64
CAPN3-205ENST00000357568 GOLGA8IPA6NC78 632 aa11.05□□□□□ -0.64
CAPN3-205ENST00000357568 C3orf70A6NLC5 250 aaPredicted RBP11.05□□□□□ -0.64
CAPN3-205ENST00000357568 GOLGA8JA6NMD2 632 aa11.05□□□□□ -0.64
CAPN3-205ENST00000357568 E5RJQ4 531 aa11.05□□□□□ -0.64
CAPN3-205ENST00000357568 H0YCG3 227 aa11.05□□□□□ -0.64
CAPN3-205ENST00000357568 WDR46O15213 610 aaKnown RBP11.05□□□□□ -0.64
CAPN3-205ENST00000357568 SLC16A4O15374 487 aa11.05□□□□□ -0.64
CAPN3-205ENST00000357568 RPL22P35268 128 aaKnown RBP11.05□□□□□ -0.64
CAPN3-205ENST00000357568 HSPA13P48723 471 aa11.05□□□□□ -0.64
CAPN3-205ENST00000357568 IKQ13123 557 aaPredicted RBP11.05□□□□□ -0.64
CAPN3-205ENST00000357568 BRDTQ58F21 947 aaPredicted RBP11.05□□□□□ -0.64
CAPN3-205ENST00000357568 ANKRD22Q5VYY1 191 aa11.05□□□□□ -0.64
CAPN3-205ENST00000357568 KAZNQ674X7 775 aa11.05□□□□□ -0.64
CAPN3-205ENST00000357568 ANO5Q75V66 913 aa11.05□□□□□ -0.64
CAPN3-205ENST00000357568 ICA1LQ8NDH6 482 aa11.05□□□□□ -0.64
CAPN3-205ENST00000357568 GDPD5Q8WTR4 605 aa11.05□□□□□ -0.64
CAPN3-205ENST00000357568 TMEM121Q9BTD3 319 aa11.05□□□□□ -0.64
CAPN3-205ENST00000357568 NRDE2Q9H7Z3 1164 aa11.05□□□□□ -0.64
CAPN3-205ENST00000357568 THAP1Q9NVV9 213 aa11.05□□□□□ -0.64
CAPN3-205ENST00000357568 IVNS1ABPQ9Y6Y0 642 aa11.05□□□□□ -0.64
CAPN3-205ENST00000357568 SF3B1O75533 1304 aaKnown RBP eCLIP11.05□□□□□ -0.64
CAPN3-205ENST00000357568 C15orf38-AP3S2A0A0A6YYH1 394 aa11.05□□□□□ -0.64
CAPN3-205ENST00000357568 GOLGA8RI6L899 631 aa11.05□□□□□ -0.64
CAPN3-205ENST00000357568 CHADO15335 359 aa11.05□□□□□ -0.64
CAPN3-205ENST00000357568 C1QAP02745 245 aa11.05□□□□□ -0.64
CAPN3-205ENST00000357568 KRT7P08729 469 aa11.05□□□□□ -0.64
CAPN3-205ENST00000357568 PRKCHP24723 683 aa11.05□□□□□ -0.64
CAPN3-205ENST00000357568 GNA15P30679 374 aa11.05□□□□□ -0.64
CAPN3-205ENST00000357568 L1CAMP32004 1257 aa11.05□□□□□ -0.64
CAPN3-205ENST00000357568 CPA2P48052 419 aa11.05□□□□□ -0.64
CAPN3-205ENST00000357568 PEX3P56589 373 aa11.05□□□□□ -0.64
CAPN3-205ENST00000357568 TMPRSS15P98073 1019 aa11.05□□□□□ -0.64
CAPN3-205ENST00000357568 PLCB3Q01970 1234 aa11.05□□□□□ -0.64
CAPN3-205ENST00000357568 TBL3Q12788 808 aaKnown RBP11.05□□□□□ -0.64
CAPN3-205ENST00000357568 MTMR2Q13614 643 aa11.05□□□□□ -0.64
CAPN3-205ENST00000357568 CUL2Q13617 745 aa11.05□□□□□ -0.64
CAPN3-205ENST00000357568 CCNIQ14094 377 aa11.05□□□□□ -0.64
CAPN3-205ENST00000357568 RABGAP1LQ5R372 815 aa11.05□□□□□ -0.64
CAPN3-205ENST00000357568 HP1BP3Q5SSJ5 553 aaPredicted RBP11.05□□□□□ -0.64
CAPN3-205ENST00000357568 TIFABQ6ZNK6 161 aa11.05□□□□□ -0.64
CAPN3-205ENST00000357568 ARPINQ7Z6K5 226 aa11.05□□□□□ -0.64
CAPN3-205ENST00000357568 FBXO27Q8NI29 283 aa11.05□□□□□ -0.64
CAPN3-205ENST00000357568 HAUS1Q96CS2 278 aa11.05□□□□□ -0.64
CAPN3-205ENST00000357568 MRRFQ96E11 262 aaKnown RBP11.05□□□□□ -0.64
CAPN3-205ENST00000357568 XPO7Q9UIA9 1087 aaKnown RBP11.05□□□□□ -0.64
CAPN3-205ENST00000357568 G3BP2Q9UN86 482 aaKnown RBP11.05□□□□□ -0.64
CAPN3-205ENST00000357568 PI4K2BG5E9Z4 385 aa11.04□□□□□ -0.64
CAPN3-205ENST00000357568 VILLO15195 856 aa11.04□□□□□ -0.64
CAPN3-205ENST00000357568 TMEM63AO94886 807 aa11.04□□□□□ -0.64
CAPN3-205ENST00000357568 CRHR1P34998 444 aa11.04□□□□□ -0.64
CAPN3-205ENST00000357568 TM4SF4P48230 202 aa11.04□□□□□ -0.64
CAPN3-205ENST00000357568 STAT2P52630 851 aa11.04□□□□□ -0.64
CAPN3-205ENST00000357568 ZNF132P52740 706 aa11.04□□□□□ -0.64
CAPN3-205ENST00000357568 AQP5P55064 265 aa11.04□□□□□ -0.64
CAPN3-205ENST00000357568 RAB15P59190 212 aa11.04□□□□□ -0.64
CAPN3-205ENST00000357568 GHRHRQ02643 423 aa11.04□□□□□ -0.64
CAPN3-205ENST00000357568 ZNF252P-AS1Q0IIN9 211 aa11.04□□□□□ -0.64
CAPN3-205ENST00000357568 DMP1Q13316 513 aaPredicted RBP11.04□□□□□ -0.64
CAPN3-205ENST00000357568 BBS9Q3SYG4 887 aa11.04□□□□□ -0.64
CAPN3-205ENST00000357568 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.04□□□□□ -0.64
CAPN3-205ENST00000357568 C1orf228Q6PIY5 440 aa11.04□□□□□ -0.64
CAPN3-205ENST00000357568 ARID3BQ8IVW6 561 aaPredicted RBP11.04□□□□□ -0.64
CAPN3-205ENST00000357568 FNIP1Q8TF40 1166 aa11.04□□□□□ -0.64
CAPN3-205ENST00000357568 RSAD2Q8WXG1 361 aa11.04□□□□□ -0.64
CAPN3-205ENST00000357568 LRRC39Q96DD0 335 aa11.04□□□□□ -0.64
CAPN3-205ENST00000357568 ACAP3Q96P50 834 aa11.04□□□□□ -0.64
CAPN3-205ENST00000357568 TOPORSQ9NS56 1045 aaPredicted RBP11.04□□□□□ -0.64
CAPN3-205ENST00000357568 ETNK2Q9NVF9 386 aa11.04□□□□□ -0.64
CAPN3-205ENST00000357568 A0A0B4J269 797 aa11.04□□□□□ -0.64
CAPN3-205ENST00000357568 A6NJR5 290 aa11.04□□□□□ -0.64
CAPN3-205ENST00000357568 DHX15O43143 795 aaKnown RBP11.04□□□□□ -0.64
CAPN3-205ENST00000357568 USP1O94782 785 aa11.04□□□□□ -0.64
CAPN3-205ENST00000357568 CFBP00751 764 aa11.04□□□□□ -0.64
CAPN3-205ENST00000357568 IFNB1P01574 187 aa11.04□□□□□ -0.64
CAPN3-205ENST00000357568 BPGMP07738 259 aa11.04□□□□□ -0.64
CAPN3-205ENST00000357568 ALOX15P16050 662 aaPredicted RBP11.04□□□□□ -0.64
CAPN3-205ENST00000357568 CNTFP26441 200 aa11.04□□□□□ -0.64
CAPN3-205ENST00000357568 YWHABP31946 246 aaKnown RBP11.04□□□□□ -0.64
CAPN3-205ENST00000357568 CDH5P33151 784 aaPredicted RBP11.04□□□□□ -0.64
CAPN3-205ENST00000357568 FDFT1P37268 417 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms