RNA–Protein interactions for RNA: ENST00000349893.8

COPE-202, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-202ENST00000349893 C1orf216Q8TAB5 229 aa16.68■□□□□ 0.26
COPE-202ENST00000349893 FBXO32Q969P5 355 aa16.68■□□□□ 0.26
COPE-202ENST00000349893 MRPL45Q9BRJ2 306 aaKnown RBP16.68■□□□□ 0.26
COPE-202ENST00000349893 SLC6A17Q9H1V8 727 aa16.68■□□□□ 0.26
COPE-202ENST00000349893 GAREM1Q9H706 876 aa16.68■□□□□ 0.26
COPE-202ENST00000349893 TM7SF3Q9NS93 570 aa16.68■□□□□ 0.26
COPE-202ENST00000349893 DNAJC17Q9NVM6 304 aaKnown RBP16.68■□□□□ 0.26
COPE-202ENST00000349893 FNDC3AQ9Y2H6 1198 aaKnown RBP16.68■□□□□ 0.26
COPE-202ENST00000349893 KIF3AQ9Y496 699 aa16.68■□□□□ 0.26
COPE-202ENST00000349893 PCDHB13Q9Y5F0 798 aa16.68■□□□□ 0.26
COPE-202ENST00000349893 ZNF462Q96JM2 2506 aa16.68■□□□□ 0.26
COPE-202ENST00000349893 KNL1Q8NG31 2342 aa16.67■□□□□ 0.26
COPE-202ENST00000349893 TRABD2BA6NFA1 517 aa16.67■□□□□ 0.26
COPE-202ENST00000349893 E9PAM4 449 aa16.67■□□□□ 0.26
COPE-202ENST00000349893 C1QL1O75973 258 aa16.67■□□□□ 0.26
COPE-202ENST00000349893 BMP15O95972 392 aa16.67■□□□□ 0.26
COPE-202ENST00000349893 IGLV3-19P01714 112 aa16.67■□□□□ 0.26
COPE-202ENST00000349893 ATXN1LP0C7T5 689 aaKnown RBP16.67■□□□□ 0.26
COPE-202ENST00000349893 MATKP42679 507 aa16.67■□□□□ 0.26
COPE-202ENST00000349893 CYP4F3Q08477 520 aa16.67■□□□□ 0.26
COPE-202ENST00000349893 ALCAMQ13740 583 aa16.67■□□□□ 0.26
COPE-202ENST00000349893 ENPP2Q13822 863 aa16.67■□□□□ 0.26
COPE-202ENST00000349893 SURF1Q15526 300 aa16.67■□□□□ 0.26
COPE-202ENST00000349893 DUOXA2Q1HG44 320 aa16.67■□□□□ 0.26
COPE-202ENST00000349893 HS2ST1Q7LGA3 356 aa16.67■□□□□ 0.26
COPE-202ENST00000349893 DYMQ7RTS9 669 aa16.67■□□□□ 0.26
COPE-202ENST00000349893 GPD1LQ8N335 351 aa16.67■□□□□ 0.26
COPE-202ENST00000349893 SETD7Q8WTS6 366 aaKnown RBP16.67■□□□□ 0.26
COPE-202ENST00000349893 TOE1Q96GM8 510 aaKnown RBP16.67■□□□□ 0.26
COPE-202ENST00000349893 CRELD1Q96HD1 420 aa16.67■□□□□ 0.26
COPE-202ENST00000349893 B3GNT5Q9BYG0 378 aa16.67■□□□□ 0.26
COPE-202ENST00000349893 CCSER2Q9H7U1 834 aa16.67■□□□□ 0.26
COPE-202ENST00000349893 ITM2CQ9NQX7 267 aa16.67■□□□□ 0.26
COPE-202ENST00000349893 STK17AQ9UEE5 414 aa16.67■□□□□ 0.26
COPE-202ENST00000349893 R3HCC1Q9Y3T6 440 aaKnown RBP16.67■□□□□ 0.26
COPE-202ENST00000349893 RAD54BQ9Y620 910 aa16.67■□□□□ 0.26
COPE-202ENST00000349893 FRMD3A2A2Y4 597 aa16.66■□□□□ 0.26
COPE-202ENST00000349893 MEI4A8MW99 385 aa16.66■□□□□ 0.26
COPE-202ENST00000349893 GCNT3O95395 438 aa16.66■□□□□ 0.26
COPE-202ENST00000349893 TNNC2P02585 160 aa16.66■□□□□ 0.26
COPE-202ENST00000349893 CISD3P0C7P0 127 aa16.66■□□□□ 0.26
COPE-202ENST00000349893 NCAM1P13591 858 aa16.66■□□□□ 0.26
COPE-202ENST00000349893 TYRP14679 529 aa16.66■□□□□ 0.26
COPE-202ENST00000349893 ZNF132P52740 706 aa16.66■□□□□ 0.26
COPE-202ENST00000349893 ATMQ13315 3056 aa16.66■□□□□ 0.26
COPE-202ENST00000349893 SMAD1Q15797 465 aaKnown RBP16.66■□□□□ 0.26
COPE-202ENST00000349893 PTPRNQ16849 979 aa16.66■□□□□ 0.26
COPE-202ENST00000349893 HLA-BQ31612 363 aa16.66■□□□□ 0.26
COPE-202ENST00000349893 WDR49Q8IV35 697 aa16.66■□□□□ 0.26
COPE-202ENST00000349893 ZCCHC9Q8N567 271 aaKnown RBP16.66■□□□□ 0.26
COPE-202ENST00000349893 PDCD7Q8N8D1 485 aaKnown RBP16.66■□□□□ 0.26
COPE-202ENST00000349893 RASSF8Q8NHQ8 419 aa16.66■□□□□ 0.26
COPE-202ENST00000349893 SCFD1Q8WVM8 642 aa16.66■□□□□ 0.26
COPE-202ENST00000349893 XPO6Q96QU8 1125 aaKnown RBP16.66■□□□□ 0.26
COPE-202ENST00000349893 MMS19Q96T76 1030 aa16.66■□□□□ 0.26
COPE-202ENST00000349893 SNX25Q9H3E2 840 aa16.66■□□□□ 0.26
COPE-202ENST00000349893 DPEP3Q9H4B8 488 aa16.66■□□□□ 0.26
COPE-202ENST00000349893 COMMD8Q9NX08 183 aa16.66■□□□□ 0.26
COPE-202ENST00000349893 WDR35Q9P2L0 1181 aa16.66■□□□□ 0.26
COPE-202ENST00000349893 CHORDC1Q9UHD1 332 aaPredicted RBP16.66■□□□□ 0.26
COPE-202ENST00000349893 FBXO10Q9UK96 956 aa16.66■□□□□ 0.26
COPE-202ENST00000349893 SHROOM3Q8TF72 1996 aa16.66■□□□□ 0.26
COPE-202ENST00000349893 METTL12A8MUP2 240 aa16.65■□□□□ 0.26
COPE-202ENST00000349893 BCAT2O15382 392 aaPredicted RBP16.65■□□□□ 0.26
COPE-202ENST00000349893 IFRD2Q12894 506 aaPredicted RBP16.65■□□□□ 0.26
COPE-202ENST00000349893 FUT11Q495W5 492 aa16.65■□□□□ 0.26
COPE-202ENST00000349893 SYCP3Q8IZU3 236 aa16.65■□□□□ 0.26
COPE-202ENST00000349893 B3GALNT2Q8NCR0 500 aa16.65■□□□□ 0.26
COPE-202ENST00000349893 LSM14AQ8ND56 463 aaKnown RBP16.65■□□□□ 0.26
COPE-202ENST00000349893 SCAMP5Q8TAC9 235 aa16.65■□□□□ 0.26
COPE-202ENST00000349893 KCNK16Q96T55 309 aa16.65■□□□□ 0.26
COPE-202ENST00000349893 KIF2CQ99661 725 aa16.65■□□□□ 0.26
COPE-202ENST00000349893 BBS2Q9BXC9 721 aa16.65■□□□□ 0.26
COPE-202ENST00000349893 FGFBP2Q9BYJ0 223 aa16.65■□□□□ 0.26
COPE-202ENST00000349893 MKRN2Q9H000 416 aaKnown RBP16.65■□□□□ 0.26
COPE-202ENST00000349893 PCIF1Q9H4Z3 704 aa16.65■□□□□ 0.26
COPE-202ENST00000349893 TBC1D7Q9P0N9 293 aa16.65■□□□□ 0.26
COPE-202ENST00000349893 MGAQ8IWI9 3026 aa16.64■□□□□ 0.26
COPE-202ENST00000349893 PTPRQQ9UMZ3 2332 aa16.64■□□□□ 0.25
COPE-202ENST00000349893 KNTC1P50748 2209 aa16.64■□□□□ 0.25
COPE-202ENST00000349893 ZNF233A6NK53 670 aa16.64■□□□□ 0.25
COPE-202ENST00000349893 KCNJ18B7U540 433 aa16.64■□□□□ 0.25
COPE-202ENST00000349893 NEDD8-MDP1E9PL57 170 aa16.64■□□□□ 0.25
COPE-202ENST00000349893 CLDN5O00501 218 aa16.64■□□□□ 0.25
COPE-202ENST00000349893 NPC1O15118 1278 aa16.64■□□□□ 0.25
COPE-202ENST00000349893 ATXN7O15265 892 aaPredicted RBP16.64■□□□□ 0.25
COPE-202ENST00000349893 STAU1O95793 577 aaKnown RBP16.64■□□□□ 0.25
COPE-202ENST00000349893 TPMTP51580 245 aa16.64■□□□□ 0.25
COPE-202ENST00000349893 SLC5A3P53794 718 aa16.64■□□□□ 0.25
COPE-202ENST00000349893 DCAF12L1Q5VU92 463 aa16.64■□□□□ 0.25
COPE-202ENST00000349893 KIAA1324Q6UXG2 1013 aaKnown RBP16.64■□□□□ 0.25
COPE-202ENST00000349893 TRAPPC11Q7Z392 1133 aa16.64■□□□□ 0.25
COPE-202ENST00000349893 MARCH9Q86YJ5 346 aa16.64■□□□□ 0.25
COPE-202ENST00000349893 OR6B3Q8NGW1 331 aa16.64■□□□□ 0.25
COPE-202ENST00000349893 RHBDD1Q8TEB9 315 aa16.64■□□□□ 0.25
COPE-202ENST00000349893 GPR174Q9BXC1 333 aa16.64■□□□□ 0.25
COPE-202ENST00000349893 KLF16Q9BXK1 252 aaPredicted RBP16.64■□□□□ 0.25
COPE-202ENST00000349893 TRIM9Q9C026 710 aa16.64■□□□□ 0.25
COPE-202ENST00000349893 PCED1AQ9H1Q7 454 aa16.64■□□□□ 0.25
COPE-202ENST00000349893 PRDM16Q9HAZ2 1276 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms