RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 CYP2F1P24903 491 aa15.48■□□□□ 0.07
VIPAS39-202ENST00000343765 ZNF200P98182 395 aaPredicted RBP15.48■□□□□ 0.07
VIPAS39-202ENST00000343765 GBE1Q04446 702 aa15.48■□□□□ 0.07
VIPAS39-202ENST00000343765 OVGP1Q12889 678 aa15.48■□□□□ 0.07
VIPAS39-202ENST00000343765 MZB1Q8WU39 189 aa15.48■□□□□ 0.07
VIPAS39-202ENST00000343765 TRIM56Q9BRZ2 755 aaKnown RBP15.48■□□□□ 0.07
VIPAS39-202ENST00000343765 SPON1Q9HCB6 807 aa15.48■□□□□ 0.07
VIPAS39-202ENST00000343765 NPHS2Q9NP85 383 aa15.48■□□□□ 0.07
VIPAS39-202ENST00000343765 PAK5Q9P286 719 aa15.48■□□□□ 0.07
VIPAS39-202ENST00000343765 TEX264Q9Y6I9 313 aa15.48■□□□□ 0.07
VIPAS39-202ENST00000343765 PLXNB2O15031 1838 aa15.48■□□□□ 0.07
VIPAS39-202ENST00000343765 A8MUI8 341 aa15.48■□□□□ 0.07
VIPAS39-202ENST00000343765 ZWINTO95229 277 aa15.48■□□□□ 0.07
VIPAS39-202ENST00000343765 KRT16P08779 473 aa15.48■□□□□ 0.07
VIPAS39-202ENST00000343765 C9orf57Q5W0N0 161 aa15.48■□□□□ 0.07
VIPAS39-202ENST00000343765 NOTUMQ6P988 496 aa15.48■□□□□ 0.07
VIPAS39-202ENST00000343765 OTOAQ7RTW8 1153 aa15.48■□□□□ 0.07
VIPAS39-202ENST00000343765 TMEM110Q86TL2 294 aa15.48■□□□□ 0.07
VIPAS39-202ENST00000343765 VSIG1Q86XK7 387 aa15.48■□□□□ 0.07
VIPAS39-202ENST00000343765 NETO2Q8NC67 525 aa15.48■□□□□ 0.07
VIPAS39-202ENST00000343765 NPLOC4Q8TAT6 608 aa15.48■□□□□ 0.07
VIPAS39-202ENST00000343765 NDRG1Q92597 394 aaKnown RBP15.48■□□□□ 0.07
VIPAS39-202ENST00000343765 MS4A4AQ96JQ5 239 aa15.48■□□□□ 0.07
VIPAS39-202ENST00000343765 SERAC1Q96JX3 654 aa15.48■□□□□ 0.07
VIPAS39-202ENST00000343765 TINF2Q9BSI4 451 aa15.48■□□□□ 0.07
VIPAS39-202ENST00000343765 PHACTR1Q9C0D0 580 aa15.48■□□□□ 0.07
VIPAS39-202ENST00000343765 NOD2Q9HC29 1040 aa15.48■□□□□ 0.07
VIPAS39-202ENST00000343765 PIN4Q9Y237 131 aaKnown RBP15.48■□□□□ 0.07
VIPAS39-202ENST00000343765 DPYSL4O14531 572 aa15.47■□□□□ 0.07
VIPAS39-202ENST00000343765 GPR32O75388 356 aa15.47■□□□□ 0.07
VIPAS39-202ENST00000343765 SMIM10L2AP0DMW4 78 aa15.47■□□□□ 0.07
VIPAS39-202ENST00000343765 SMIM10L2BP0DMW5 78 aa15.47■□□□□ 0.07
VIPAS39-202ENST00000343765 DESP17661 470 aa15.47■□□□□ 0.07
VIPAS39-202ENST00000343765 SLC18A1P54219 525 aa15.47■□□□□ 0.07
VIPAS39-202ENST00000343765 YWHAZP63104 245 aaKnown RBP15.47■□□□□ 0.07
VIPAS39-202ENST00000343765 RASA2Q15283 850 aa15.47■□□□□ 0.07
VIPAS39-202ENST00000343765 PPM1NQ8N819 430 aa15.47■□□□□ 0.07
VIPAS39-202ENST00000343765 ETNK1Q9HBU6 452 aa15.47■□□□□ 0.07
VIPAS39-202ENST00000343765 CHKBQ9Y259 395 aa15.47■□□□□ 0.07
VIPAS39-202ENST00000343765 SYNJ2BP-COX16A0A087WUM0 186 aa15.47■□□□□ 0.07
VIPAS39-202ENST00000343765 SPTLC1O15269 473 aa15.47■□□□□ 0.07
VIPAS39-202ENST00000343765 CHADO15335 359 aa15.47■□□□□ 0.07
VIPAS39-202ENST00000343765 STRNO43815 780 aa15.47■□□□□ 0.07
VIPAS39-202ENST00000343765 LPXNO60711 386 aa15.47■□□□□ 0.07
VIPAS39-202ENST00000343765 CYP2C9P11712 490 aa15.47■□□□□ 0.07
VIPAS39-202ENST00000343765 TGM2P21980 687 aa15.47■□□□□ 0.07
VIPAS39-202ENST00000343765 SETDB1Q15047 1291 aa15.47■□□□□ 0.07
VIPAS39-202ENST00000343765 BANPQ8N9N5 519 aa15.47■□□□□ 0.07
VIPAS39-202ENST00000343765 GTF3C2Q8WUA4 911 aaPredicted RBP15.47■□□□□ 0.07
VIPAS39-202ENST00000343765 DNAJB3Q8WWF6 145 aa15.47■□□□□ 0.07
VIPAS39-202ENST00000343765 RNF39Q9H2S5 420 aa15.47■□□□□ 0.07
VIPAS39-202ENST00000343765 NRDE2Q9H7Z3 1164 aa15.47■□□□□ 0.07
VIPAS39-202ENST00000343765 PLEKHA5Q9HAU0 1116 aa15.47■□□□□ 0.07
VIPAS39-202ENST00000343765 ETNK2Q9NVF9 386 aa15.47■□□□□ 0.07
VIPAS39-202ENST00000343765 COX16Q9P0S2 106 aa15.47■□□□□ 0.07
VIPAS39-202ENST00000343765 DCTN4Q9UJW0 460 aa15.47■□□□□ 0.07
VIPAS39-202ENST00000343765 MFHAS1Q9Y4C4 1052 aa15.47■□□□□ 0.07
VIPAS39-202ENST00000343765 HTTP42858 3142 aa15.47■□□□□ 0.07
VIPAS39-202ENST00000343765 A6NJR5 290 aa15.47■□□□□ 0.07
VIPAS39-202ENST00000343765 SMAPO00193 183 aa15.47■□□□□ 0.07
VIPAS39-202ENST00000343765 PYGBP11216 843 aa15.47■□□□□ 0.07
VIPAS39-202ENST00000343765 NEFHP12036 1026 aa15.47■□□□□ 0.07
VIPAS39-202ENST00000343765 TARSP26639 723 aaKnown RBP15.47■□□□□ 0.07
VIPAS39-202ENST00000343765 CCDC185Q8N715 623 aa15.47■□□□□ 0.07
VIPAS39-202ENST00000343765 TMEM40Q8WWA1 233 aa15.47■□□□□ 0.07
VIPAS39-202ENST00000343765 TMEM237Q96Q45 408 aa15.47■□□□□ 0.07
VIPAS39-202ENST00000343765 LRRC37BQ96QE4 947 aa15.47■□□□□ 0.07
VIPAS39-202ENST00000343765 KLC2Q9H0B6 622 aa15.47■□□□□ 0.07
VIPAS39-202ENST00000343765 FETUBQ9UGM5 382 aa15.47■□□□□ 0.07
VIPAS39-202ENST00000343765 ZC3H7BQ9UGR2 993 aaKnown RBP15.47■□□□□ 0.07
VIPAS39-202ENST00000343765 MAD1L1Q9Y6D9 718 aa15.47■□□□□ 0.07
VIPAS39-202ENST00000343765 USH1CQ9Y6N9 552 aa15.47■□□□□ 0.07
VIPAS39-202ENST00000343765 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.46■□□□□ 0.07
VIPAS39-202ENST00000343765 GNL1P36915 607 aaPredicted RBP15.46■□□□□ 0.07
VIPAS39-202ENST00000343765 SLC10A2Q12908 348 aaPredicted RBP15.46■□□□□ 0.07
VIPAS39-202ENST00000343765 ZBTB6Q15916 424 aa15.46■□□□□ 0.07
VIPAS39-202ENST00000343765 FBXO47Q5MNV8 452 aa15.46■□□□□ 0.07
VIPAS39-202ENST00000343765 SLC9A4Q6AI14 798 aa15.46■□□□□ 0.07
VIPAS39-202ENST00000343765 SMYD5Q6GMV2 418 aa15.46■□□□□ 0.07
VIPAS39-202ENST00000343765 ZNF449Q6P9G9 518 aa15.46■□□□□ 0.07
VIPAS39-202ENST00000343765 PYROXD2Q8N2H3 581 aa15.46■□□□□ 0.07
VIPAS39-202ENST00000343765 SLC2A14Q8TDB8 520 aa15.46■□□□□ 0.07
VIPAS39-202ENST00000343765 KBTBD7Q8WVZ9 684 aa15.46■□□□□ 0.07
VIPAS39-202ENST00000343765 TEKT4Q8WW24 435 aa15.46■□□□□ 0.07
VIPAS39-202ENST00000343765 PTPRN2Q92932 1015 aa15.46■□□□□ 0.07
VIPAS39-202ENST00000343765 TTC17Q96AE7 1141 aa15.46■□□□□ 0.07
VIPAS39-202ENST00000343765 FAM111AQ96PZ2 611 aa15.46■□□□□ 0.07
VIPAS39-202ENST00000343765 ABHD16BQ9H3Z7 469 aa15.46■□□□□ 0.07
VIPAS39-202ENST00000343765 AP4E1Q9UPM8 1137 aa15.46■□□□□ 0.07
VIPAS39-202ENST00000343765 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.46■□□□□ 0.07
VIPAS39-202ENST00000343765 IQANK1A0A1B0GTG1 560 aa15.46■□□□□ 0.06
VIPAS39-202ENST00000343765 CXorf49A8MYA2 514 aaPredicted RBP15.46■□□□□ 0.06
VIPAS39-202ENST00000343765 GRB14Q14449 540 aa15.46■□□□□ 0.06
VIPAS39-202ENST00000343765 HIC1Q14526 733 aa15.46■□□□□ 0.06
VIPAS39-202ENST00000343765 RGS9BPQ6ZS82 235 aa15.46■□□□□ 0.06
VIPAS39-202ENST00000343765 ZNF467Q7Z7K2 595 aaPredicted RBP15.46■□□□□ 0.06
VIPAS39-202ENST00000343765 CAND1Q86VP6 1230 aaKnown RBP15.46■□□□□ 0.06
VIPAS39-202ENST00000343765 SLC44A1Q8WWI5 657 aa15.46■□□□□ 0.06
VIPAS39-202ENST00000343765 L3MBTL3Q96JM7 780 aaPredicted RBP15.46■□□□□ 0.06
VIPAS39-202ENST00000343765 ZNF670Q9BS34 389 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms