RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 CNR2P34972 360 aa14.03□□□□□ -0.16
SIRPB3P-201ENST00000340424 SATB1Q01826 763 aa14.03□□□□□ -0.16
SIRPB3P-201ENST00000340424 BST2Q10589 180 aaKnown RBP14.03□□□□□ -0.16
SIRPB3P-201ENST00000340424 DHCR24Q15392 516 aa14.03□□□□□ -0.16
SIRPB3P-201ENST00000340424 GOLGA7BQ2TAP0 167 aa14.03□□□□□ -0.16
SIRPB3P-201ENST00000340424 CT47A1Q5JQC4 288 aaPredicted RBP14.03□□□□□ -0.16
SIRPB3P-201ENST00000340424 TMEM270Q6UE05 265 aa14.03□□□□□ -0.16
SIRPB3P-201ENST00000340424 ENOSF1Q7L5Y1 443 aa14.03□□□□□ -0.16
SIRPB3P-201ENST00000340424 PIGZQ86VD9 579 aa14.03□□□□□ -0.16
SIRPB3P-201ENST00000340424 EHBP1Q8NDI1 1231 aa14.03□□□□□ -0.16
SIRPB3P-201ENST00000340424 ACDQ96AP0 544 aa14.03□□□□□ -0.16
SIRPB3P-201ENST00000340424 NUP62CLQ9H1M0 184 aa14.03□□□□□ -0.16
SIRPB3P-201ENST00000340424 EPC1Q9H2F5 836 aa14.03□□□□□ -0.16
SIRPB3P-201ENST00000340424 NAGPAQ9UK23 515 aa14.03□□□□□ -0.16
SIRPB3P-201ENST00000340424 FRYLO94915 3013 aa14.03□□□□□ -0.16
SIRPB3P-201ENST00000340424 CCDC163A0A0D9SF12 145 aa14.02□□□□□ -0.17
SIRPB3P-201ENST00000340424 A0A1W2PQH9 124 aa14.02□□□□□ -0.17
SIRPB3P-201ENST00000340424 O00370 1275 aa14.02□□□□□ -0.17
SIRPB3P-201ENST00000340424 RNF40O75150 1001 aa14.02□□□□□ -0.17
SIRPB3P-201ENST00000340424 EGFP01133 1207 aa14.02□□□□□ -0.17
SIRPB3P-201ENST00000340424 ADH5P11766 374 aa14.02□□□□□ -0.17
SIRPB3P-201ENST00000340424 RARGP13631 454 aa14.02□□□□□ -0.17
SIRPB3P-201ENST00000340424 ERCC5P28715 1186 aaPredicted RBP14.02□□□□□ -0.17
SIRPB3P-201ENST00000340424 PLA2G4AP47712 749 aa14.02□□□□□ -0.17
SIRPB3P-201ENST00000340424 GAD2Q05329 585 aa14.02□□□□□ -0.17
SIRPB3P-201ENST00000340424 LRMPQ12912 555 aa14.02□□□□□ -0.17
SIRPB3P-201ENST00000340424 TSSK4Q6SA08 328 aa14.02□□□□□ -0.17
SIRPB3P-201ENST00000340424 LCLAT1Q6UWP7 414 aa14.02□□□□□ -0.17
SIRPB3P-201ENST00000340424 HTR3DQ70Z44 454 aa14.02□□□□□ -0.17
SIRPB3P-201ENST00000340424 LONP2Q86WA8 852 aa14.02□□□□□ -0.17
SIRPB3P-201ENST00000340424 TTC30AQ86WT1 665 aa14.02□□□□□ -0.17
SIRPB3P-201ENST00000340424 FAM114A1Q8IWE2 563 aa14.02□□□□□ -0.17
SIRPB3P-201ENST00000340424 KCTD13Q8WZ19 329 aa14.02□□□□□ -0.17
SIRPB3P-201ENST00000340424 SECISBP2LQ93073 1101 aaKnown RBP14.02□□□□□ -0.17
SIRPB3P-201ENST00000340424 CNOT6LQ96LI5 555 aaKnown RBP14.02□□□□□ -0.17
SIRPB3P-201ENST00000340424 KLF16Q9BXK1 252 aaPredicted RBP14.02□□□□□ -0.17
SIRPB3P-201ENST00000340424 THAP9Q9H5L6 903 aa14.02□□□□□ -0.17
SIRPB3P-201ENST00000340424 ZNF510Q9Y2H8 683 aa14.02□□□□□ -0.17
SIRPB3P-201ENST00000340424 PCDHB4Q9Y5E5 795 aa14.02□□□□□ -0.17
SIRPB3P-201ENST00000340424 GTPBP10A4D1E9 387 aaKnown RBP14.01□□□□□ -0.17
SIRPB3P-201ENST00000340424 GOLGA6L22H0YM25 854 aa14.01□□□□□ -0.17
SIRPB3P-201ENST00000340424 K7ESF4 209 aa14.01□□□□□ -0.17
SIRPB3P-201ENST00000340424 HOXC11O43248 304 aaPredicted RBP14.01□□□□□ -0.17
SIRPB3P-201ENST00000340424 ZBED1O96006 694 aa14.01□□□□□ -0.17
SIRPB3P-201ENST00000340424 OPRD1P41143 372 aa14.01□□□□□ -0.17
SIRPB3P-201ENST00000340424 PGFP49763 221 aa14.01□□□□□ -0.17
SIRPB3P-201ENST00000340424 COG7P83436 770 aa14.01□□□□□ -0.17
SIRPB3P-201ENST00000340424 PDE4CQ08493 712 aa14.01□□□□□ -0.17
SIRPB3P-201ENST00000340424 CNGA2Q16280 664 aa14.01□□□□□ -0.17
SIRPB3P-201ENST00000340424 MEA1Q16626 185 aa14.01□□□□□ -0.17
SIRPB3P-201ENST00000340424 TPD52L1Q16890 204 aaPredicted RBP14.01□□□□□ -0.17
SIRPB3P-201ENST00000340424 HSF5Q4G112 596 aaPredicted RBP14.01□□□□□ -0.17
SIRPB3P-201ENST00000340424 C10orf120Q5SQS8 335 aa14.01□□□□□ -0.17
SIRPB3P-201ENST00000340424 BTBD8Q5XKL5 378 aa14.01□□□□□ -0.17
SIRPB3P-201ENST00000340424 PM20D1Q6GTS8 502 aa14.01□□□□□ -0.17
SIRPB3P-201ENST00000340424 RHBDF2Q6PJF5 856 aa14.01□□□□□ -0.17
SIRPB3P-201ENST00000340424 NUDT18Q6ZVK8 323 aa14.01□□□□□ -0.17
SIRPB3P-201ENST00000340424 SCML4Q8N228 414 aa14.01□□□□□ -0.17
SIRPB3P-201ENST00000340424 CAMKK1Q8N5S9 505 aa14.01□□□□□ -0.17
SIRPB3P-201ENST00000340424 SUMF1Q8NBK3 374 aa14.01□□□□□ -0.17
SIRPB3P-201ENST00000340424 RUBCNQ92622 972 aa14.01□□□□□ -0.17
SIRPB3P-201ENST00000340424 PNKPQ96T60 521 aa14.01□□□□□ -0.17
SIRPB3P-201ENST00000340424 INTS2Q9H0H0 1204 aaKnown RBP14.01□□□□□ -0.17
SIRPB3P-201ENST00000340424 NMUR1Q9HB89 426 aa14.01□□□□□ -0.17
SIRPB3P-201ENST00000340424 LRRC4Q9HBW1 653 aa14.01□□□□□ -0.17
SIRPB3P-201ENST00000340424 OLA1Q9NTK5 396 aaKnown RBP14.01□□□□□ -0.17
SIRPB3P-201ENST00000340424 OSER1Q9NX31 292 aa14.01□□□□□ -0.17
SIRPB3P-201ENST00000340424 SLC8A2Q9UPR5 921 aa14.01□□□□□ -0.17
SIRPB3P-201ENST00000340424 CNTN6Q9UQ52 1028 aa14.01□□□□□ -0.17
SIRPB3P-201ENST00000340424 RIF1Q5UIP0 2472 aaKnown RBP14□□□□□ -0.17
SIRPB3P-201ENST00000340424 FAM186AA6NE01 2351 aa14□□□□□ -0.17
SIRPB3P-201ENST00000340424 WDR87Q6ZQQ6 2873 aa14□□□□□ -0.17
SIRPB3P-201ENST00000340424 A0A0A0MRY4 1105 aa14□□□□□ -0.17
SIRPB3P-201ENST00000340424 TBX18O95935 607 aa14□□□□□ -0.17
SIRPB3P-201ENST00000340424 TKTL1P51854 596 aa14□□□□□ -0.17
SIRPB3P-201ENST00000340424 ZNF132P52740 706 aa14□□□□□ -0.17
SIRPB3P-201ENST00000340424 GAB4Q2WGN9 574 aa14□□□□□ -0.17
SIRPB3P-201ENST00000340424 PKDCCQ504Y2 493 aa14□□□□□ -0.17
SIRPB3P-201ENST00000340424 SYT13Q7L8C5 426 aa14□□□□□ -0.17
SIRPB3P-201ENST00000340424 SCD5Q86SK9 330 aa14□□□□□ -0.17
SIRPB3P-201ENST00000340424 BBS7Q8IWZ6 715 aa14□□□□□ -0.17
SIRPB3P-201ENST00000340424 SIX6OS1Q8N1H7 587 aa14□□□□□ -0.17
SIRPB3P-201ENST00000340424 RBBP8NLQ8NC74 664 aaPredicted RBP14□□□□□ -0.17
SIRPB3P-201ENST00000340424 DCLK3Q9C098 648 aa14□□□□□ -0.17
SIRPB3P-201ENST00000340424 FBRSL1Q9HCM7 1045 aaKnown RBP14□□□□□ -0.17
SIRPB3P-201ENST00000340424 CNGB3Q9NQW8 809 aa14□□□□□ -0.17
SIRPB3P-201ENST00000340424 SPHK2Q9NRA0 654 aa14□□□□□ -0.17
SIRPB3P-201ENST00000340424 LMBRD1Q9NUN5 540 aa14□□□□□ -0.17
SIRPB3P-201ENST00000340424 WDR35Q9P2L0 1181 aa14□□□□□ -0.17
SIRPB3P-201ENST00000340424 RAB23Q9ULC3 237 aa14□□□□□ -0.17
SIRPB3P-201ENST00000340424 STRIP2Q9ULQ0 834 aa14□□□□□ -0.17
SIRPB3P-201ENST00000340424 WDR3Q9UNX4 943 aaKnown RBP eCLIP14□□□□□ -0.17
SIRPB3P-201ENST00000340424 GREM1O60565 184 aa13.99□□□□□ -0.17
SIRPB3P-201ENST00000340424 APODP05090 189 aa13.99□□□□□ -0.17
SIRPB3P-201ENST00000340424 IRF1P10914 325 aa13.99□□□□□ -0.17
SIRPB3P-201ENST00000340424 GRIA2P42262 883 aa13.99□□□□□ -0.17
SIRPB3P-201ENST00000340424 MFAP3P55082 362 aa13.99□□□□□ -0.17
SIRPB3P-201ENST00000340424 YWHAGP61981 247 aaKnown RBP eCLIP13.99□□□□□ -0.17
SIRPB3P-201ENST00000340424 MRPS21P82921 87 aaKnown RBP13.99□□□□□ -0.17
SIRPB3P-201ENST00000340424 LY6G5CQ5SRR4 150 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms