RNA–Protein interactions for RNA: ENST00000336128.11

ZNF548-201, Transcript of zinc finger protein 548, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZNF548, Length 2,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-201ENST00000336128 HMGB1P1B2RPK0 211 aaPredicted RBP12.97□□□□□ -0.33
ZNF548-201ENST00000336128 HHLA1C9JL84 531 aa12.97□□□□□ -0.33
ZNF548-201ENST00000336128 NRP1O14786 923 aa12.97□□□□□ -0.33
ZNF548-201ENST00000336128 RIPK2O43353 540 aa12.97□□□□□ -0.33
ZNF548-201ENST00000336128 NBNO60934 754 aa12.97□□□□□ -0.33
ZNF548-201ENST00000336128 DDHD2O94830 711 aa12.97□□□□□ -0.33
ZNF548-201ENST00000336128 IFNB1P01574 187 aa12.97□□□□□ -0.33
ZNF548-201ENST00000336128 SHBGP04278 402 aa12.97□□□□□ -0.33
ZNF548-201ENST00000336128 GDF10P55107 478 aa12.97□□□□□ -0.33
ZNF548-201ENST00000336128 DAOAP59103 153 aa12.97□□□□□ -0.33
ZNF548-201ENST00000336128 DSC1Q08554 894 aa12.97□□□□□ -0.33
ZNF548-201ENST00000336128 SLC25A52Q3SY17 297 aa12.97□□□□□ -0.33
ZNF548-201ENST00000336128 RAB41Q5JT25 222 aa12.97□□□□□ -0.33
ZNF548-201ENST00000336128 C1orf228Q6PIY5 440 aa12.97□□□□□ -0.33
ZNF548-201ENST00000336128 HFE2Q6ZVN8 426 aa12.97□□□□□ -0.33
ZNF548-201ENST00000336128 TRMT10CQ7L0Y3 403 aaKnown RBP12.97□□□□□ -0.33
ZNF548-201ENST00000336128 CCDC185Q8N715 623 aa12.97□□□□□ -0.33
ZNF548-201ENST00000336128 PQLC3Q8N755 202 aa12.97□□□□□ -0.33
ZNF548-201ENST00000336128 FAF2Q96CS3 445 aa12.97□□□□□ -0.33
ZNF548-201ENST00000336128 PWWP2AQ96N64 755 aa12.97□□□□□ -0.33
ZNF548-201ENST00000336128 TMEM209Q96SK2 561 aa12.97□□□□□ -0.33
ZNF548-201ENST00000336128 ZNF670Q9BS34 389 aa12.97□□□□□ -0.33
ZNF548-201ENST00000336128 TSPYL1Q9H0U9 437 aa12.97□□□□□ -0.33
ZNF548-201ENST00000336128 ADAM7Q9H2U9 754 aa12.97□□□□□ -0.33
ZNF548-201ENST00000336128 CDC42EP4Q9H3Q1 356 aaKnown RBP12.97□□□□□ -0.33
ZNF548-201ENST00000336128 DHX35Q9H5Z1 703 aaKnown RBP12.97□□□□□ -0.33
ZNF548-201ENST00000336128 LRRC4CQ9HCJ2 640 aa12.97□□□□□ -0.33
ZNF548-201ENST00000336128 TMLHEQ9NVH6 421 aa12.97□□□□□ -0.33
ZNF548-201ENST00000336128 DNAJC17Q9NVM6 304 aaKnown RBP12.97□□□□□ -0.33
ZNF548-201ENST00000336128 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.97□□□□□ -0.33
ZNF548-201ENST00000336128 CALCOCO1Q9P1Z2 691 aa12.97□□□□□ -0.33
ZNF548-201ENST00000336128 AP4E1Q9UPM8 1137 aa12.97□□□□□ -0.33
ZNF548-201ENST00000336128 ZNF487B1APH4 448 aa12.97□□□□□ -0.33
ZNF548-201ENST00000336128 APOL1O14791 398 aa12.97□□□□□ -0.33
ZNF548-201ENST00000336128 MYCP01106 439 aaPredicted RBP12.97□□□□□ -0.33
ZNF548-201ENST00000336128 L1CAMP32004 1257 aa12.97□□□□□ -0.33
ZNF548-201ENST00000336128 NOS2P35228 1153 aa12.97□□□□□ -0.33
ZNF548-201ENST00000336128 PITX1P78337 314 aaPredicted RBP12.97□□□□□ -0.33
ZNF548-201ENST00000336128 SLC29A2Q14542 456 aa12.97□□□□□ -0.33
ZNF548-201ENST00000336128 DPYSL2Q16555 572 aa12.97□□□□□ -0.33
ZNF548-201ENST00000336128 KRT71Q3SY84 523 aa12.97□□□□□ -0.33
ZNF548-201ENST00000336128 DCAF6Q58WW2 860 aa12.97□□□□□ -0.33
ZNF548-201ENST00000336128 PPP6R3Q5H9R7 873 aaPredicted RBP12.97□□□□□ -0.33
ZNF548-201ENST00000336128 COLGALT2Q8IYK4 626 aa12.97□□□□□ -0.33
ZNF548-201ENST00000336128 THEM5Q8N1Q8 247 aa12.97□□□□□ -0.33
ZNF548-201ENST00000336128 PCDH19Q8TAB3 1148 aa12.97□□□□□ -0.33
ZNF548-201ENST00000336128 RSAD2Q8WXG1 361 aa12.97□□□□□ -0.33
ZNF548-201ENST00000336128 P3H4Q92791 437 aa12.97□□□□□ -0.33
ZNF548-201ENST00000336128 KCTD15Q96SI1 283 aaPredicted RBP12.97□□□□□ -0.33
ZNF548-201ENST00000336128 NPY6RQ99463 290 aa12.97□□□□□ -0.33
ZNF548-201ENST00000336128 CENPHQ9H3R5 247 aa12.97□□□□□ -0.33
ZNF548-201ENST00000336128 CNGB3Q9NQW8 809 aa12.97□□□□□ -0.33
ZNF548-201ENST00000336128 TBC1D13Q9NVG8 400 aa12.97□□□□□ -0.33
ZNF548-201ENST00000336128 TPX2Q9ULW0 747 aaKnown RBP12.97□□□□□ -0.33
ZNF548-201ENST00000336128 STAP1Q9ULZ2 295 aa12.97□□□□□ -0.33
ZNF548-201ENST00000336128 RBP3P10745 1247 aa12.96□□□□□ -0.33
ZNF548-201ENST00000336128 TGM2P21980 687 aa12.96□□□□□ -0.33
ZNF548-201ENST00000336128 LMAN1P49257 510 aa12.96□□□□□ -0.33
ZNF548-201ENST00000336128 ROR1Q01973 937 aa12.96□□□□□ -0.33
ZNF548-201ENST00000336128 GPNMBQ14956 572 aa12.96□□□□□ -0.33
ZNF548-201ENST00000336128 AGBL2Q5U5Z8 902 aa12.96□□□□□ -0.33
ZNF548-201ENST00000336128 SLC9A4Q6AI14 798 aa12.96□□□□□ -0.33
ZNF548-201ENST00000336128 UNC45BQ8IWX7 931 aa12.96□□□□□ -0.33
ZNF548-201ENST00000336128 ZCCHC9Q8N567 271 aaKnown RBP12.96□□□□□ -0.33
ZNF548-201ENST00000336128 PLD5Q8N7P1 536 aa12.96□□□□□ -0.33
ZNF548-201ENST00000336128 FOXP3Q9BZS1 431 aa12.96□□□□□ -0.33
ZNF548-201ENST00000336128 POPDC2Q9HBU9 364 aa12.96□□□□□ -0.33
ZNF548-201ENST00000336128 CSNK1G1Q9HCP0 422 aa12.96□□□□□ -0.33
ZNF548-201ENST00000336128 PAK6Q9NQU5 681 aaPredicted RBP12.96□□□□□ -0.33
ZNF548-201ENST00000336128 TMEM161AQ9NX61 479 aa12.96□□□□□ -0.33
ZNF548-201ENST00000336128 YJEFN3A6XGL0 299 aa12.95□□□□□ -0.34
ZNF548-201ENST00000336128 E7ENQ6 273 aa12.95□□□□□ -0.34
ZNF548-201ENST00000336128 TMEM189-UBE2V1I3L0A0 370 aa12.95□□□□□ -0.34
ZNF548-201ENST00000336128 NDC80O14777 642 aa12.95□□□□□ -0.34
ZNF548-201ENST00000336128 COL6A1P12109 1028 aa12.95□□□□□ -0.34
ZNF548-201ENST00000336128 BDNFP23560 247 aa12.95□□□□□ -0.34
ZNF548-201ENST00000336128 CYP2F1P24903 491 aa12.95□□□□□ -0.34
ZNF548-201ENST00000336128 RDXP35241 583 aaKnown RBP12.95□□□□□ -0.34
ZNF548-201ENST00000336128 TSPY1Q01534 308 aa12.95□□□□□ -0.34
ZNF548-201ENST00000336128 RNASEH2BQ5TBB1 312 aaKnown RBP12.95□□□□□ -0.34
ZNF548-201ENST00000336128 SYPL2Q5VXT5 272 aa12.95□□□□□ -0.34
ZNF548-201ENST00000336128 DARS2Q6PI48 645 aaKnown RBP12.95□□□□□ -0.34
ZNF548-201ENST00000336128 BNIPLQ7Z465 357 aa12.95□□□□□ -0.34
ZNF548-201ENST00000336128 LRRTM3Q86VH5 581 aa12.95□□□□□ -0.34
ZNF548-201ENST00000336128 HOOK3Q86VS8 718 aa12.95□□□□□ -0.34
ZNF548-201ENST00000336128 FAM131BQ86XD5 332 aa12.95□□□□□ -0.34
ZNF548-201ENST00000336128 UHMK1Q8TAS1 419 aaKnown RBP12.95□□□□□ -0.34
ZNF548-201ENST00000336128 NT5C3BQ969T7 300 aa12.95□□□□□ -0.34
ZNF548-201ENST00000336128 DEFB118Q96PH6 123 aa12.95□□□□□ -0.34
ZNF548-201ENST00000336128 MAGEB5Q9BZ81 275 aa12.95□□□□□ -0.34
ZNF548-201ENST00000336128 MTMR10Q9NXD2 777 aa12.95□□□□□ -0.34
ZNF548-201ENST00000336128 KANSL3Q9P2N6 904 aa12.95□□□□□ -0.34
ZNF548-201ENST00000336128 FZD10Q9ULW2 581 aa12.95□□□□□ -0.34
ZNF548-201ENST00000336128 NAALADL1Q9UQQ1 740 aa12.95□□□□□ -0.34
ZNF548-201ENST00000336128 SYNJ2BP-COX16A0A087WUM0 186 aa12.95□□□□□ -0.34
ZNF548-201ENST00000336128 H7C0C1 242 aa12.95□□□□□ -0.34
ZNF548-201ENST00000336128 M0QYT0 321 aa12.95□□□□□ -0.34
ZNF548-201ENST00000336128 ENPP3O14638 875 aa12.95□□□□□ -0.34
ZNF548-201ENST00000336128 FYNP06241 537 aa12.95□□□□□ -0.34
ZNF548-201ENST00000336128 USP17L7P0C7H9 530 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms