RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 CDC25CP30307 473 aa18.33■□□□□ 0.53
CHGA-202ENST00000334654 YWHAZP63104 245 aaKnown RBP18.33■□□□□ 0.53
CHGA-202ENST00000334654 SKIV2LQ15477 1246 aaKnown RBP18.33■□□□□ 0.53
CHGA-202ENST00000334654 SPA17Q15506 151 aa18.33■□□□□ 0.53
CHGA-202ENST00000334654 ATAT1Q5SQI0 421 aa18.33■□□□□ 0.53
CHGA-202ENST00000334654 STXBP5Q5T5C0 1151 aa18.33■□□□□ 0.53
CHGA-202ENST00000334654 FAM102AQ5T9C2 384 aaPredicted RBP18.33■□□□□ 0.53
CHGA-202ENST00000334654 CES5AQ6NT32 575 aa18.33■□□□□ 0.53
CHGA-202ENST00000334654 ARCQ7LC44 396 aa18.33■□□□□ 0.53
CHGA-202ENST00000334654 MAFAQ8NHW3 353 aaPredicted RBP18.33■□□□□ 0.53
CHGA-202ENST00000334654 ATRIPQ8WXE1 791 aa18.33■□□□□ 0.53
CHGA-202ENST00000334654 HLA-CQ95604 372 aa18.33■□□□□ 0.53
CHGA-202ENST00000334654 TRIM11Q96F44 468 aa18.33■□□□□ 0.53
CHGA-202ENST00000334654 SLC2A13Q96QE2 648 aa18.33■□□□□ 0.53
CHGA-202ENST00000334654 METTL5Q9NRN9 209 aaKnown RBP18.33■□□□□ 0.53
CHGA-202ENST00000334654 COL6A3P12111 3177 aa18.33■□□□□ 0.52
CHGA-202ENST00000334654 C2orf78A6NCI8 922 aa18.33■□□□□ 0.52
CHGA-202ENST00000334654 FGF19O95750 216 aa18.33■□□□□ 0.52
CHGA-202ENST00000334654 OAS1P00973 400 aaKnown RBP18.33■□□□□ 0.52
CHGA-202ENST00000334654 FLT3P36888 993 aa18.33■□□□□ 0.52
CHGA-202ENST00000334654 PSEN1P49768 467 aa18.33■□□□□ 0.52
CHGA-202ENST00000334654 RPL7AP62424 266 aaKnown RBP18.33■□□□□ 0.52
CHGA-202ENST00000334654 HS1BP3Q53T59 392 aa18.33■□□□□ 0.52
CHGA-202ENST00000334654 SYPL2Q5VXT5 272 aa18.33■□□□□ 0.52
CHGA-202ENST00000334654 TXNDC8Q6A555 127 aa18.33■□□□□ 0.52
CHGA-202ENST00000334654 BEND5Q7L4P6 421 aa18.33■□□□□ 0.52
CHGA-202ENST00000334654 ARHGAP18Q8N392 663 aa18.33■□□□□ 0.52
CHGA-202ENST00000334654 EDEM1Q92611 657 aa18.33■□□□□ 0.52
CHGA-202ENST00000334654 FAM149B1Q96BN6 582 aa18.33■□□□□ 0.52
CHGA-202ENST00000334654 LACRTQ9GZZ8 138 aa18.33■□□□□ 0.52
CHGA-202ENST00000334654 RNF38Q9H0F5 515 aa18.33■□□□□ 0.52
CHGA-202ENST00000334654 ATXN3LQ9H3M9 355 aa18.33■□□□□ 0.52
CHGA-202ENST00000334654 CCSER2Q9H7U1 834 aa18.33■□□□□ 0.52
CHGA-202ENST00000334654 POPDC2Q9HBU9 364 aa18.33■□□□□ 0.52
CHGA-202ENST00000334654 ABCC13Q9NSE7 274 aa18.33■□□□□ 0.52
CHGA-202ENST00000334654 MYO1AQ9UBC5 1043 aa18.33■□□□□ 0.52
CHGA-202ENST00000334654 NUDT5Q9UKK9 219 aa18.33■□□□□ 0.52
CHGA-202ENST00000334654 NAALADL1Q9UQQ1 740 aa18.33■□□□□ 0.52
CHGA-202ENST00000334654 USP15Q9Y4E8 981 aaPredicted RBP18.33■□□□□ 0.52
CHGA-202ENST00000334654 CLUHO75153 1309 aa18.32■□□□□ 0.52
CHGA-202ENST00000334654 ZNF197O14709 1029 aa18.32■□□□□ 0.52
CHGA-202ENST00000334654 PJA2O43164 708 aa18.32■□□□□ 0.52
CHGA-202ENST00000334654 HSF2BPO75031 334 aa18.32■□□□□ 0.52
CHGA-202ENST00000334654 TBX18O95935 607 aa18.32■□□□□ 0.52
CHGA-202ENST00000334654 KRT3P12035 628 aa18.32■□□□□ 0.52
CHGA-202ENST00000334654 RARGP13631 454 aa18.32■□□□□ 0.52
CHGA-202ENST00000334654 CEBPBP17676 345 aa18.32■□□□□ 0.52
CHGA-202ENST00000334654 RFC1P35251 1148 aaPredicted RBP18.32■□□□□ 0.52
CHGA-202ENST00000334654 MTHFRP42898 656 aa18.32■□□□□ 0.52
CHGA-202ENST00000334654 PITX1P78337 314 aaPredicted RBP18.32■□□□□ 0.52
CHGA-202ENST00000334654 KRT83P78385 493 aa18.32■□□□□ 0.52
CHGA-202ENST00000334654 TEAD2Q15562 447 aa18.32■□□□□ 0.52
CHGA-202ENST00000334654 DNAJC24Q6P3W2 148 aa18.32■□□□□ 0.52
CHGA-202ENST00000334654 DEFB106AQ8N104 65 aa18.32■□□□□ 0.52
CHGA-202ENST00000334654 EMC1Q8N766 993 aa18.32■□□□□ 0.52
CHGA-202ENST00000334654 RIPOR3Q96MK2 946 aa18.32■□□□□ 0.52
CHGA-202ENST00000334654 SLC22A12Q96S37 553 aa18.32■□□□□ 0.52
CHGA-202ENST00000334654 SLC46A2Q9BY10 475 aa18.32■□□□□ 0.52
CHGA-202ENST00000334654 ADAM33Q9BZ11 813 aa18.32■□□□□ 0.52
CHGA-202ENST00000334654 TRIM7Q9C029 511 aa18.32■□□□□ 0.52
CHGA-202ENST00000334654 POMKQ9H5K3 350 aa18.32■□□□□ 0.52
CHGA-202ENST00000334654 PRDM6Q9NQX0 595 aa18.32■□□□□ 0.52
CHGA-202ENST00000334654 PARVAQ9NVD7 372 aa18.32■□□□□ 0.52
CHGA-202ENST00000334654 COG5Q9UP83 839 aa18.32■□□□□ 0.52
CHGA-202ENST00000334654 MRPS23Q9Y3D9 190 aaKnown RBP18.32■□□□□ 0.52
CHGA-202ENST00000334654 TMEM191CA6NGB0 347 aa18.31■□□□□ 0.52
CHGA-202ENST00000334654 C2CD4BA6NLJ0 364 aa18.31■□□□□ 0.52
CHGA-202ENST00000334654 MBTPS2O43462 519 aa18.31■□□□□ 0.52
CHGA-202ENST00000334654 DAB1O75553 588 aa18.31■□□□□ 0.52
CHGA-202ENST00000334654 OLFM2O95897 454 aa18.31■□□□□ 0.52
CHGA-202ENST00000334654 ABL1P00519 1130 aa18.31■□□□□ 0.52
CHGA-202ENST00000334654 FSHRP23945 695 aa18.31■□□□□ 0.52
CHGA-202ENST00000334654 TUBP50607 506 aa18.31■□□□□ 0.52
CHGA-202ENST00000334654 VAV2P52735 878 aa18.31■□□□□ 0.52
CHGA-202ENST00000334654 RNASE9P60153 205 aaKnown RBP18.31■□□□□ 0.52
CHGA-202ENST00000334654 OGDHQ02218 1023 aa18.31■□□□□ 0.52
CHGA-202ENST00000334654 TCEAL1Q15170 157 aa18.31■□□□□ 0.52
CHGA-202ENST00000334654 BTBD8Q5XKL5 378 aa18.31■□□□□ 0.52
CHGA-202ENST00000334654 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.31■□□□□ 0.52
CHGA-202ENST00000334654 CTNNBL1Q8WYA6 563 aaPredicted RBP18.31■□□□□ 0.52
CHGA-202ENST00000334654 ING5Q8WYH8 240 aa18.31■□□□□ 0.52
CHGA-202ENST00000334654 MRPS31Q92665 395 aaKnown RBP18.31■□□□□ 0.52
CHGA-202ENST00000334654 NT5C3BQ969T7 300 aa18.31■□□□□ 0.52
CHGA-202ENST00000334654 ZSWIM3Q96MP5 696 aa18.31■□□□□ 0.52
CHGA-202ENST00000334654 CYP2S1Q96SQ9 504 aa18.31■□□□□ 0.52
CHGA-202ENST00000334654 DDX23Q9BUQ8 820 aaKnown RBP18.31■□□□□ 0.52
CHGA-202ENST00000334654 SELENOOQ9BVL4 669 aa18.31■□□□□ 0.52
CHGA-202ENST00000334654 SALL4Q9UJQ4 1053 aa18.31■□□□□ 0.52
CHGA-202ENST00000334654 DUSP10Q9Y6W6 482 aa18.31■□□□□ 0.52
CHGA-202ENST00000334654 COCHO43405 550 aa18.3■□□□□ 0.52
CHGA-202ENST00000334654 NRDCO43847 1150 aa18.3■□□□□ 0.52
CHGA-202ENST00000334654 TLR5O60602 858 aa18.3■□□□□ 0.52
CHGA-202ENST00000334654 TFE3P19532 575 aaPredicted RBP18.3■□□□□ 0.52
CHGA-202ENST00000334654 MATKP42679 507 aa18.3■□□□□ 0.52
CHGA-202ENST00000334654 ZNF252P-AS1Q0IIN9 211 aa18.3■□□□□ 0.52
CHGA-202ENST00000334654 EIF4EBP2Q13542 120 aaPredicted RBP18.3■□□□□ 0.52
CHGA-202ENST00000334654 CBX2Q14781 532 aaPredicted RBP18.3■□□□□ 0.52
CHGA-202ENST00000334654 LEXMQ3ZCV2 418 aa18.3■□□□□ 0.52
CHGA-202ENST00000334654 HECTD3Q5T447 861 aa18.3■□□□□ 0.52
CHGA-202ENST00000334654 OTUD1Q5VV17 481 aaPredicted RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms