RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 CARD9Q9H257 536 aa10.5□□□□□ -0.73
CHD3-201ENST00000330494 GIMAP4Q9NUV9 329 aa10.5□□□□□ -0.73
CHD3-201ENST00000330494 TRPM5Q9NZQ8 1165 aa10.5□□□□□ -0.73
CHD3-201ENST00000330494 BARX2Q9UMQ3 279 aaPredicted RBP10.5□□□□□ -0.73
CHD3-201ENST00000330494 GUCA1CO95843 209 aa10.5□□□□□ -0.73
CHD3-201ENST00000330494 TEDDM1Q5T9Z0 273 aa10.5□□□□□ -0.73
CHD3-201ENST00000330494 LRRN4CLQ8ND94 238 aa10.5□□□□□ -0.73
CHD3-201ENST00000330494 TMC2Q8TDI7 906 aa10.5□□□□□ -0.73
CHD3-201ENST00000330494 MROH1Q8NDA8 1641 aa10.5□□□□□ -0.73
CHD3-201ENST00000330494 FAM83EQ2M2I3 478 aa10.5□□□□□ -0.73
CHD3-201ENST00000330494 TMEM119Q4V9L6 283 aa10.5□□□□□ -0.73
CHD3-201ENST00000330494 ERMARDQ5T6L9 678 aa10.5□□□□□ -0.73
CHD3-201ENST00000330494 MTMR8Q96EF0 704 aa10.5□□□□□ -0.73
CHD3-201ENST00000330494 CNPY3Q9BT09 278 aa10.5□□□□□ -0.73
CHD3-201ENST00000330494 OSGEPL1Q9H4B0 414 aa10.5□□□□□ -0.73
CHD3-201ENST00000330494 A0A0U1RQJ8 604 aa10.5□□□□□ -0.73
CHD3-201ENST00000330494 MLH1P40692 756 aa10.5□□□□□ -0.73
CHD3-201ENST00000330494 ABCE1P61221 599 aaKnown RBP10.5□□□□□ -0.73
CHD3-201ENST00000330494 TMEM132BQ14DG7 1078 aa10.5□□□□□ -0.73
CHD3-201ENST00000330494 LRRC34Q8IZ02 419 aa10.5□□□□□ -0.73
CHD3-201ENST00000330494 FLCNQ8NFG4 579 aa10.5□□□□□ -0.73
CHD3-201ENST00000330494 ITGA11Q9UKX5 1188 aa10.5□□□□□ -0.73
CHD3-201ENST00000330494 SNCAIPQ9Y6H5 919 aa10.5□□□□□ -0.73
CHD3-201ENST00000330494 O00370 1275 aa10.5□□□□□ -0.73
CHD3-201ENST00000330494 SLC2A3P11169 496 aa10.5□□□□□ -0.73
CHD3-201ENST00000330494 NUDT2P50583 147 aa10.5□□□□□ -0.73
CHD3-201ENST00000330494 TBC1D19Q8N5T2 526 aa10.5□□□□□ -0.73
CHD3-201ENST00000330494 SAE1Q9UBE0 346 aaPredicted RBP10.5□□□□□ -0.73
CHD3-201ENST00000330494 DCCP43146 1447 aa10.5□□□□□ -0.73
CHD3-201ENST00000330494 CFAP73A6NFT4 308 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 TPST1O60507 370 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 PEX10O60683 326 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 CENPAP49450 140 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 UBE3AQ05086 875 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 CCDC15Q0P6D6 951 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 PLD1Q13393 1074 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 TRADDQ15628 312 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 DAB2IPQ5VWQ8 1189 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 RINLQ6ZS11 566 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 PALB2Q86YC2 1186 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 UNC45BQ8IWX7 931 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 CD302Q8IX05 232 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 KCTD17Q8N5Z5 321 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 KAT5Q92993 513 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 CDC42EP4Q9H3Q1 356 aaKnown RBP10.49□□□□□ -0.73
CHD3-201ENST00000330494 GTPBP10A4D1E9 387 aaKnown RBP10.49□□□□□ -0.73
CHD3-201ENST00000330494 CFAP99D6REC4 459 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 FOXP2O15409 715 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 PCNAP12004 261 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 INPP5AQ14642 412 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 CDKAL1Q5VV42 579 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 ARMC6Q6NXE6 501 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 MCOLN2Q8IZK6 566 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 JADE3Q92613 823 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 LPPQ93052 612 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 ZBTB10Q96DT7 871 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 GAD1Q99259 594 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 TLR8Q9NR97 1041 aaKnown RBP10.49□□□□□ -0.73
CHD3-201ENST00000330494 NSMCE4AQ9NXX6 385 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 UTP6Q9NYH9 597 aaKnown RBP10.49□□□□□ -0.73
CHD3-201ENST00000330494 PCDHB12Q9Y5F1 795 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 SDR42E2A6NKP2 422 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 CLASP2O75122 1294 aaKnown RBP10.49□□□□□ -0.73
CHD3-201ENST00000330494 RECQL4O94761 1208 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 PYGMP11217 842 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 SLC26A2P50443 739 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 RHOAP61586 193 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 LAMB3Q13751 1172 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 PGS1Q32NB8 556 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 ABRAQ8N0Z2 381 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 HES6Q96HZ4 224 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 VPS50Q96JG6 964 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 ADAM2Q99965 735 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 BLOC1S4Q9NUP1 217 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 AAR2Q9Y312 384 aaKnown RBP10.49□□□□□ -0.73
CHD3-201ENST00000330494 LGALS2P05162 132 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 PDK2Q15119 407 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 IL17AQ16552 155 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 ZNF280DQ6N043 979 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 TMEM154Q6P9G4 183 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 WDR18Q9BV38 432 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 ABHD16BQ9H3Z7 469 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 RBM22Q9NW64 420 aaKnown RBP eCLIP10.49□□□□□ -0.731e-5■■■■□ 22.7
CHD3-201ENST00000330494 FAM32AQ9Y421 112 aaKnown RBP10.49□□□□□ -0.73
CHD3-201ENST00000330494 ERI2A8K979 691 aaKnown RBP10.49□□□□□ -0.73
CHD3-201ENST00000330494 CXCL11O14625 94 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 GLI1P08151 1106 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 TRPC1P48995 793 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 FNTAP49354 379 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 PLOD1Q02809 727 aaPredicted RBP10.49□□□□□ -0.73
CHD3-201ENST00000330494 BTG3Q14201 252 aaPredicted RBP10.49□□□□□ -0.73
CHD3-201ENST00000330494 CSHL1Q14406 222 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 FBXO25Q8TCJ0 367 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 RNF208Q9H0X6 261 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 VIPAS39Q9H9C1 493 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 PKD2L2Q9NZM6 624 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 RIC1Q4ADV7 1423 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 PROSCO94903 275 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 PCDH8O95206 1070 aa10.49□□□□□ -0.73
CHD3-201ENST00000330494 TFE3P19532 575 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms