RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 CHCHD3Q9NX63 227 aaKnown RBP14.21□□□□□ -0.13
SPAST-201ENST00000315285 CTNNAL1Q9UBT7 734 aa14.21□□□□□ -0.13
SPAST-201ENST00000315285 SOAT2O75908 522 aa14.21□□□□□ -0.13
SPAST-201ENST00000315285 MICAL2O94851 1124 aa14.21□□□□□ -0.13
SPAST-201ENST00000315285 CYP1A2P05177 515 aa14.21□□□□□ -0.13
SPAST-201ENST00000315285 CDH2P19022 906 aaPredicted RBP14.21□□□□□ -0.13
SPAST-201ENST00000315285 MIPP30301 263 aa14.21□□□□□ -0.13
SPAST-201ENST00000315285 PRELID2Q8N945 189 aa14.21□□□□□ -0.13
SPAST-201ENST00000315285 HES6Q96HZ4 224 aa14.21□□□□□ -0.13
SPAST-201ENST00000315285 L3MBTL3Q96JM7 780 aaPredicted RBP14.21□□□□□ -0.13
SPAST-201ENST00000315285 GPR63Q9BZJ6 419 aa14.21□□□□□ -0.13
SPAST-201ENST00000315285 XPO1O14980 1071 aaKnown RBP14.21□□□□□ -0.14
SPAST-201ENST00000315285 CLASP2O75122 1294 aaKnown RBP14.21□□□□□ -0.14
SPAST-201ENST00000315285 HARS2P49590 506 aaKnown RBP14.21□□□□□ -0.14
SPAST-201ENST00000315285 MAP3K7CLP57077 242 aa14.21□□□□□ -0.14
SPAST-201ENST00000315285 POU4F1Q01851 419 aa14.21□□□□□ -0.14
SPAST-201ENST00000315285 PLOD1Q02809 727 aaPredicted RBP14.21□□□□□ -0.14
SPAST-201ENST00000315285 BTKQ06187 659 aa14.21□□□□□ -0.14
SPAST-201ENST00000315285 STKLD1Q8NE28 680 aa14.21□□□□□ -0.14
SPAST-201ENST00000315285 CENPTQ96BT3 561 aa14.21□□□□□ -0.14
SPAST-201ENST00000315285 TUBGCP3Q96CW5 907 aa14.21□□□□□ -0.14
SPAST-201ENST00000315285 SRPK1Q96SB4 655 aaKnown RBP14.21□□□□□ -0.14
SPAST-201ENST00000315285 FER1L4A9Z1Z3 1794 aa14.2□□□□□ -0.14
SPAST-201ENST00000315285 APOC4-APOC2K7ER74 178 aa14.2□□□□□ -0.14
SPAST-201ENST00000315285 FCHO1O14526 889 aa14.2□□□□□ -0.14
SPAST-201ENST00000315285 TPST1O60507 370 aa14.2□□□□□ -0.14
SPAST-201ENST00000315285 APOC2P02655 101 aa14.2□□□□□ -0.14
SPAST-201ENST00000315285 SPATA31C1P0DKV0 1188 aa14.2□□□□□ -0.14
SPAST-201ENST00000315285 MARCKSL1P49006 195 aa14.2□□□□□ -0.14
SPAST-201ENST00000315285 TRMT5Q32P41 509 aaKnown RBP14.2□□□□□ -0.14
SPAST-201ENST00000315285 TEKT4Q8WW24 435 aa14.2□□□□□ -0.14
SPAST-201ENST00000315285 PRDM4Q9UKN5 801 aa14.2□□□□□ -0.14
SPAST-201ENST00000315285 VANGL2Q9ULK5 521 aa14.2□□□□□ -0.14
SPAST-201ENST00000315285 TFE3P19532 575 aaPredicted RBP14.2□□□□□ -0.14
SPAST-201ENST00000315285 RANBP1P43487 201 aa14.2□□□□□ -0.14
SPAST-201ENST00000315285 ECM1Q16610 540 aa14.2□□□□□ -0.14
SPAST-201ENST00000315285 FKBP1CQ5VVH2 108 aa14.2□□□□□ -0.14
SPAST-201ENST00000315285 TIGD7Q6NT04 549 aaPredicted RBP14.2□□□□□ -0.14
SPAST-201ENST00000315285 SHC3Q92529 594 aa14.2□□□□□ -0.14
SPAST-201ENST00000315285 ZNF75CPQ92670 426 aaPredicted RBP14.2□□□□□ -0.14
SPAST-201ENST00000315285 OSMRQ99650 979 aa14.2□□□□□ -0.14
SPAST-201ENST00000315285 HSD17B14Q9BPX1 270 aa14.2□□□□□ -0.14
SPAST-201ENST00000315285 TEX12Q9BXU0 123 aa14.2□□□□□ -0.14
SPAST-201ENST00000315285 IRAK4Q9NWZ3 460 aa14.2□□□□□ -0.14
SPAST-201ENST00000315285 VPS9D1Q9Y2B5 631 aa14.2□□□□□ -0.14
SPAST-201ENST00000315285 STX7O15400 261 aaKnown RBP14.2□□□□□ -0.14
SPAST-201ENST00000315285 TBC1D4O60343 1298 aa14.2□□□□□ -0.14
SPAST-201ENST00000315285 ZSCAN5DPP0CG00 497 aa14.2□□□□□ -0.14
SPAST-201ENST00000315285 ADRA1DP25100 572 aa14.2□□□□□ -0.14
SPAST-201ENST00000315285 ALDH5A1P51649 535 aaPredicted RBP14.2□□□□□ -0.14
SPAST-201ENST00000315285 ZNF157P51786 506 aaPredicted RBP14.2□□□□□ -0.14
SPAST-201ENST00000315285 TKTL1P51854 596 aa14.2□□□□□ -0.14
SPAST-201ENST00000315285 AUHQ13825 339 aaKnown RBP14.2□□□□□ -0.14
SPAST-201ENST00000315285 CYLC2Q14093 348 aaPredicted RBP14.2□□□□□ -0.14
SPAST-201ENST00000315285 BMT2Q1RMZ1 405 aa14.2□□□□□ -0.14
SPAST-201ENST00000315285 ZCWPW2Q504Y3 356 aa14.2□□□□□ -0.14
SPAST-201ENST00000315285 N4BP2L1Q5TBK1 243 aaPredicted RBP14.2□□□□□ -0.14
SPAST-201ENST00000315285 TMEM237Q96Q45 408 aa14.2□□□□□ -0.14
SPAST-201ENST00000315285 A1CFQ9NQ94 594 aaKnown RBP14.2□□□□□ -0.14
SPAST-201ENST00000315285 V9GYQ6 96 aa14.2□□□□□ -0.14
SPAST-201ENST00000315285 NCAM2O15394 837 aa14.2□□□□□ -0.14
SPAST-201ENST00000315285 IRF1P10914 325 aa14.2□□□□□ -0.14
SPAST-201ENST00000315285 YY1P25490 414 aa14.2□□□□□ -0.14
SPAST-201ENST00000315285 DRG2P55039 364 aaKnown RBP14.2□□□□□ -0.14
SPAST-201ENST00000315285 WASHC2DQ5SRD0 308 aa14.2□□□□□ -0.14
SPAST-201ENST00000315285 PDPK2PQ6A1A2 396 aa14.2□□□□□ -0.14
SPAST-201ENST00000315285 CCDC60Q8IWA6 550 aaPredicted RBP14.2□□□□□ -0.14
SPAST-201ENST00000315285 FUKQ8N0W3 1084 aa14.2□□□□□ -0.14
SPAST-201ENST00000315285 REPS2Q8NFH8 660 aa14.2□□□□□ -0.14
SPAST-201ENST00000315285 TRAPPC12Q8WVT3 735 aa14.2□□□□□ -0.14
SPAST-201ENST00000315285 DTNBP1Q96EV8 351 aa14.2□□□□□ -0.14
SPAST-201ENST00000315285 CNBD2Q96M20 576 aa14.2□□□□□ -0.14
SPAST-201ENST00000315285 MRIQ9BWK5 157 aa14.2□□□□□ -0.14
SPAST-201ENST00000315285 APOL5Q9BWW9 433 aa14.2□□□□□ -0.14
SPAST-201ENST00000315285 CAAP1Q9H8G2 361 aa14.2□□□□□ -0.14
SPAST-201ENST00000315285 CYP4F12Q9HCS2 524 aa14.2□□□□□ -0.14
SPAST-201ENST00000315285 SLIT3O75094 1523 aa14.19□□□□□ -0.14
SPAST-201ENST00000315285 SRRM3A6NNA2 597 aaPredicted RBP14.19□□□□□ -0.14
SPAST-201ENST00000315285 SLCO1B7G3V0H7 640 aa14.19□□□□□ -0.14
SPAST-201ENST00000315285 H0Y626 953 aa14.19□□□□□ -0.14
SPAST-201ENST00000315285 TRIM16O95361 564 aa14.19□□□□□ -0.14
SPAST-201ENST00000315285 CALCAP01258 141 aa14.19□□□□□ -0.14
SPAST-201ENST00000315285 ZCCHC18P0CG32 403 aa14.19□□□□□ -0.14
SPAST-201ENST00000315285 WLSQ5T9L3 541 aa14.19□□□□□ -0.14
SPAST-201ENST00000315285 TMPRSS6Q8IU80 811 aa14.19□□□□□ -0.14
SPAST-201ENST00000315285 TMEM161BQ8NDZ6 487 aa14.19□□□□□ -0.14
SPAST-201ENST00000315285 CEP41Q9BYV8 373 aa14.19□□□□□ -0.14
SPAST-201ENST00000315285 SNTG2Q9NY99 539 aa14.19□□□□□ -0.14
SPAST-201ENST00000315285 NCKIPSDQ9NZQ3 722 aa14.19□□□□□ -0.14
SPAST-201ENST00000315285 FKBP6O75344 327 aa14.19□□□□□ -0.14
SPAST-201ENST00000315285 HNRNPCP07910 306 aaKnown RBP eCLIP14.19□□□□□ -0.14
SPAST-201ENST00000315285 ZNF286BP0CG31 522 aa14.19□□□□□ -0.14
SPAST-201ENST00000315285 SERPINB10P48595 397 aa14.19□□□□□ -0.14
SPAST-201ENST00000315285 CNTN2Q02246 1040 aa14.19□□□□□ -0.14
SPAST-201ENST00000315285 MAMLD1Q13495 774 aa14.19□□□□□ -0.14
SPAST-201ENST00000315285 ACAP1Q15027 740 aa14.19□□□□□ -0.14
SPAST-201ENST00000315285 MIB1Q86YT6 1006 aa14.19□□□□□ -0.14
SPAST-201ENST00000315285 APLFQ8IW19 511 aaPredicted RBP14.19□□□□□ -0.14
SPAST-201ENST00000315285 RAET1EQ8TD07 263 aa14.19□□□□□ -0.14
SPAST-201ENST00000315285 CINPQ9BW66 212 aaPredicted RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms