RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 ZNHIT6Q9NWK9 470 aaKnown RBP8.69□□□□□ -1.02
CHD6-201ENST00000309279 DDX43Q9NXZ2 648 aaKnown RBP8.69□□□□□ -1.02
CHD6-201ENST00000309279 SLC30A1Q9Y6M5 507 aa8.69□□□□□ -1.02
CHD6-201ENST00000309279 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.68□□□□□ -1.02
CHD6-201ENST00000309279 A0A1B0GTH6 734 aa8.68□□□□□ -1.02
CHD6-201ENST00000309279 WDR27A2RRH5 827 aa8.68□□□□□ -1.02
CHD6-201ENST00000309279 LGALS16A8MUM7 142 aa8.68□□□□□ -1.02
CHD6-201ENST00000309279 GOLGA6L19H0YKK7 550 aa8.68□□□□□ -1.02
CHD6-201ENST00000309279 CILPO75339 1184 aa8.68□□□□□ -1.02
CHD6-201ENST00000309279 GLP2RO95838 553 aa8.68□□□□□ -1.02
CHD6-201ENST00000309279 GLUD1P00367 558 aa8.68□□□□□ -1.02
CHD6-201ENST00000309279 WEE2P0C1S8 567 aa8.68□□□□□ -1.02
CHD6-201ENST00000309279 TBXAS1P24557 533 aaPredicted RBP8.68□□□□□ -1.02
CHD6-201ENST00000309279 HOXD12P35452 270 aa8.68□□□□□ -1.02
CHD6-201ENST00000309279 KRT20P35900 424 aa8.68□□□□□ -1.02
CHD6-201ENST00000309279 LTBRP36941 435 aa8.68□□□□□ -1.02
CHD6-201ENST00000309279 PAPOLAP51003 745 aaKnown RBP8.68□□□□□ -1.02
CHD6-201ENST00000309279 TPM4P67936 248 aa8.68□□□□□ -1.02
CHD6-201ENST00000309279 CUL2Q13617 745 aa8.68□□□□□ -1.02
CHD6-201ENST00000309279 INTS6LQ5JSJ4 861 aaKnown RBP8.68□□□□□ -1.02
CHD6-201ENST00000309279 SPOCD1Q6ZMY3 1216 aa8.68□□□□□ -1.02
CHD6-201ENST00000309279 BTN2A1Q7KYR7 527 aa8.68□□□□□ -1.02
CHD6-201ENST00000309279 LRRTM3Q86VH5 581 aa8.68□□□□□ -1.02
CHD6-201ENST00000309279 PALB2Q86YC2 1186 aa8.68□□□□□ -1.02
CHD6-201ENST00000309279 CRYBG2Q8N1P7 616 aa8.68□□□□□ -1.02
CHD6-201ENST00000309279 CARNMT1Q8N4J0 409 aa8.68□□□□□ -1.02
CHD6-201ENST00000309279 FAM26EQ8N5C1 309 aa8.68□□□□□ -1.02
CHD6-201ENST00000309279 UBR7Q8N806 425 aa8.68□□□□□ -1.02
CHD6-201ENST00000309279 OR6B3Q8NGW1 331 aa8.68□□□□□ -1.02
CHD6-201ENST00000309279 EPS8L1Q8TE68 723 aa8.68□□□□□ -1.02
CHD6-201ENST00000309279 PABPC5Q96DU9 382 aaKnown RBP8.68□□□□□ -1.02
CHD6-201ENST00000309279 PPM1MQ96MI6 270 aa8.68□□□□□ -1.02
CHD6-201ENST00000309279 ERGIC2Q96RQ1 377 aa8.68□□□□□ -1.02
CHD6-201ENST00000309279 TMEM209Q96SK2 561 aa8.68□□□□□ -1.02
CHD6-201ENST00000309279 SMAD5Q99717 465 aaKnown RBP8.68□□□□□ -1.02
CHD6-201ENST00000309279 INTS2Q9H0H0 1204 aaKnown RBP8.68□□□□□ -1.02
CHD6-201ENST00000309279 SNX25Q9H3E2 840 aa8.68□□□□□ -1.02
CHD6-201ENST00000309279 PLEKHA4Q9H4M7 779 aa8.68□□□□□ -1.02
CHD6-201ENST00000309279 NLRC4Q9NPP4 1024 aa8.68□□□□□ -1.02
CHD6-201ENST00000309279 QPCTLQ9NXS2 382 aa8.68□□□□□ -1.02
CHD6-201ENST00000309279 CEP72Q9P209 647 aa8.68□□□□□ -1.02
CHD6-201ENST00000309279 STIM2Q9P246 746 aa8.68□□□□□ -1.02
CHD6-201ENST00000309279 HSFX1Q9UBD0 423 aa8.68□□□□□ -1.02
CHD6-201ENST00000309279 AFF4Q9UHB7 1163 aaKnown RBP8.68□□□□□ -1.02
CHD6-201ENST00000309279 DPP7Q9UHL4 492 aa8.68□□□□□ -1.02
CHD6-201ENST00000309279 FBXW11Q9UKB1 542 aa8.68□□□□□ -1.02
CHD6-201ENST00000309279 CDH9Q9ULB4 789 aa8.68□□□□□ -1.02
CHD6-201ENST00000309279 BARX2Q9UMQ3 279 aaPredicted RBP8.68□□□□□ -1.02
CHD6-201ENST00000309279 MSRB2Q9Y3D2 182 aa8.68□□□□□ -1.02
CHD6-201ENST00000309279 PTPRDP23468 1912 aa8.67□□□□□ -1.02
CHD6-201ENST00000309279 A8MXQ7 604 aa8.67□□□□□ -1.02
CHD6-201ENST00000309279 HCRTO43612 131 aa8.67□□□□□ -1.02
CHD6-201ENST00000309279 VNN2O95498 520 aa8.67□□□□□ -1.02
CHD6-201ENST00000309279 EPCAMP16422 314 aa8.67□□□□□ -1.02
CHD6-201ENST00000309279 ACO1P21399 889 aaKnown RBP8.67□□□□□ -1.02
CHD6-201ENST00000309279 MZF1P28698 734 aaPredicted RBP8.67□□□□□ -1.02
CHD6-201ENST00000309279 RAP1GAPP47736 663 aa8.67□□□□□ -1.02
CHD6-201ENST00000309279 NDST1P52848 882 aa8.67□□□□□ -1.02
CHD6-201ENST00000309279 TSPY1Q01534 308 aa8.67□□□□□ -1.02
CHD6-201ENST00000309279 LRMPQ12912 555 aa8.67□□□□□ -1.02
CHD6-201ENST00000309279 NR1I3Q14994 352 aa8.67□□□□□ -1.02
CHD6-201ENST00000309279 FKBP15Q5T1M5 1219 aa8.67□□□□□ -1.02
CHD6-201ENST00000309279 SCARA5Q6ZMJ2 495 aa8.67□□□□□ -1.02
CHD6-201ENST00000309279 CAPN12Q6ZSI9 719 aa8.67□□□□□ -1.02
CHD6-201ENST00000309279 ENOSF1Q7L5Y1 443 aa8.67□□□□□ -1.02
CHD6-201ENST00000309279 SRLQ86TD4 932 aa8.67□□□□□ -1.02
CHD6-201ENST00000309279 TRIM74Q86UV6 250 aa8.67□□□□□ -1.02
CHD6-201ENST00000309279 TRIM73Q86UV7 250 aa8.67□□□□□ -1.02
CHD6-201ENST00000309279 ARHGEF19Q8IW93 802 aa8.67□□□□□ -1.02
CHD6-201ENST00000309279 DCP1BQ8IZD4 617 aaKnown RBP8.67□□□□□ -1.02
CHD6-201ENST00000309279 PPM1KQ8N3J5 372 aa8.67□□□□□ -1.02
CHD6-201ENST00000309279 DRAXINQ8NBI3 349 aaPredicted RBP8.67□□□□□ -1.02
CHD6-201ENST00000309279 MGARPQ8TDB4 240 aa8.67□□□□□ -1.02
CHD6-201ENST00000309279 WHAMMQ8TF30 809 aa8.67□□□□□ -1.02
CHD6-201ENST00000309279 C2orf15Q8WU43 125 aaKnown RBP8.67□□□□□ -1.02
CHD6-201ENST00000309279 STON2Q8WXE9 905 aa8.67□□□□□ -1.02
CHD6-201ENST00000309279 CASP10Q92851 521 aa8.67□□□□□ -1.02
CHD6-201ENST00000309279 TSGA13Q96PP4 275 aa8.67□□□□□ -1.02
CHD6-201ENST00000309279 ALPK1Q96QP1 1244 aa8.67□□□□□ -1.02
CHD6-201ENST00000309279 RHOBTB2Q9BYZ6 727 aa8.67□□□□□ -1.02
CHD6-201ENST00000309279 IGFLR1Q9H665 355 aa8.67□□□□□ -1.02
CHD6-201ENST00000309279 ZNF304Q9HCX3 659 aa8.67□□□□□ -1.02
CHD6-201ENST00000309279 SIX2Q9NPC8 291 aa8.67□□□□□ -1.02
CHD6-201ENST00000309279 CISHQ9NSE2 258 aa8.67□□□□□ -1.02
CHD6-201ENST00000309279 CLEC1BQ9P126 229 aa8.67□□□□□ -1.02
CHD6-201ENST00000309279 APEX2Q9UBZ4 518 aa8.67□□□□□ -1.02
CHD6-201ENST00000309279 GIMAP2Q9UG22 337 aa8.67□□□□□ -1.02
CHD6-201ENST00000309279 CNTN6Q9UQ52 1028 aa8.67□□□□□ -1.02
CHD6-201ENST00000309279 MYBPHLA2RUH7 354 aa8.66□□□□□ -1.02
CHD6-201ENST00000309279 MTMR11A4FU01 709 aa8.66□□□□□ -1.02
CHD6-201ENST00000309279 F8VZ95 297 aa8.66□□□□□ -1.02
CHD6-201ENST00000309279 LINC01565O15544 149 aa8.66□□□□□ -1.02
CHD6-201ENST00000309279 ATP2C2O75185 946 aa8.66□□□□□ -1.02
CHD6-201ENST00000309279 IL33O95760 270 aa8.66□□□□□ -1.02
CHD6-201ENST00000309279 BAG2O95816 211 aa8.66□□□□□ -1.02
CHD6-201ENST00000309279 OR4Q2P0C623 313 aa8.66□□□□□ -1.02
CHD6-201ENST00000309279 CPB1P15086 417 aa8.66□□□□□ -1.02
CHD6-201ENST00000309279 PTPN1P18031 435 aaKnown RBP8.66□□□□□ -1.02
CHD6-201ENST00000309279 ACAT1P24752 427 aaKnown RBP8.66□□□□□ -1.02
CHD6-201ENST00000309279 YWHAEP62258 255 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms