RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 NEK2P51955 445 aa11.93□□□□□ -0.5
VPS33A-201ENST00000267199 MRPS22P82650 360 aaKnown RBP11.93□□□□□ -0.5
VPS33A-201ENST00000267199 POLNQ7Z5Q5 900 aa11.93□□□□□ -0.5
VPS33A-201ENST00000267199 ADCK1Q86TW2 530 aa11.93□□□□□ -0.5
VPS33A-201ENST00000267199 SAMD3Q8N6K7 520 aa11.93□□□□□ -0.5
VPS33A-201ENST00000267199 APOL2Q9BQE5 337 aa11.93□□□□□ -0.5
VPS33A-201ENST00000267199 DENND2DQ9H6A0 471 aaPredicted RBP11.93□□□□□ -0.5
VPS33A-201ENST00000267199 UBA6A0AVT1 1052 aaPredicted RBP11.93□□□□□ -0.5
VPS33A-201ENST00000267199 VWA5AO00534 786 aa11.93□□□□□ -0.5
VPS33A-201ENST00000267199 WNT10BO00744 389 aa11.93□□□□□ -0.5
VPS33A-201ENST00000267199 PTPN11Q06124 597 aaPredicted RBP11.93□□□□□ -0.5
VPS33A-201ENST00000267199 SLC15A2Q16348 729 aa11.93□□□□□ -0.5
VPS33A-201ENST00000267199 AMHR2Q16671 573 aa11.93□□□□□ -0.5
VPS33A-201ENST00000267199 N4BP2L1Q5TBK1 243 aaPredicted RBP11.93□□□□□ -0.5
VPS33A-201ENST00000267199 LLGL2Q6P1M3 1020 aa11.93□□□□□ -0.5
VPS33A-201ENST00000267199 MPZL3Q6UWV2 235 aa11.93□□□□□ -0.5
VPS33A-201ENST00000267199 WDR49Q8IV35 697 aa11.93□□□□□ -0.5
VPS33A-201ENST00000267199 RXFP2Q8WXD0 754 aa11.93□□□□□ -0.5
VPS33A-201ENST00000267199 AKT1S1Q96B36 256 aa11.93□□□□□ -0.5
VPS33A-201ENST00000267199 NDNQ99608 321 aa11.93□□□□□ -0.5
VPS33A-201ENST00000267199 TMEM79Q9BSE2 394 aa11.93□□□□□ -0.5
VPS33A-201ENST00000267199 LRMDAQ9H2I8 198 aa11.93□□□□□ -0.5
VPS33A-201ENST00000267199 ARL8BQ9NVJ2 186 aa11.93□□□□□ -0.5
VPS33A-201ENST00000267199 GID8Q9NWU2 228 aa11.93□□□□□ -0.5
VPS33A-201ENST00000267199 MROH7Q68CQ1 1323 aa11.93□□□□□ -0.5
VPS33A-201ENST00000267199 M0R3G1 203 aa11.93□□□□□ -0.5
VPS33A-201ENST00000267199 EDF1O60869 148 aaKnown RBP11.93□□□□□ -0.5
VPS33A-201ENST00000267199 CYP1A2P05177 515 aa11.93□□□□□ -0.5
VPS33A-201ENST00000267199 CXCL8P10145 99 aa11.93□□□□□ -0.5
VPS33A-201ENST00000267199 PKNOX1P55347 436 aa11.93□□□□□ -0.5
VPS33A-201ENST00000267199 GSCP56915 257 aaPredicted RBP11.93□□□□□ -0.5
VPS33A-201ENST00000267199 GPR162Q16538 588 aa11.93□□□□□ -0.5
VPS33A-201ENST00000267199 GLRA4Q5JXX5 417 aa11.93□□□□□ -0.5
VPS33A-201ENST00000267199 MARK2Q7KZI7 788 aaKnown RBP11.93□□□□□ -0.5
VPS33A-201ENST00000267199 ACOT1Q86TX2 421 aa11.93□□□□□ -0.5
VPS33A-201ENST00000267199 RASGEF1CQ8N431 466 aa11.93□□□□□ -0.5
VPS33A-201ENST00000267199 ZSCAN18Q8TBC5 510 aaPredicted RBP11.93□□□□□ -0.5
VPS33A-201ENST00000267199 JADE3Q92613 823 aa11.93□□□□□ -0.5
VPS33A-201ENST00000267199 PTPRN2Q92932 1015 aa11.93□□□□□ -0.5
VPS33A-201ENST00000267199 WNK4Q96J92 1243 aa11.93□□□□□ -0.5
VPS33A-201ENST00000267199 ZBTB18Q99592 522 aa11.93□□□□□ -0.5
VPS33A-201ENST00000267199 GORASP1Q9BQQ3 440 aa11.93□□□□□ -0.5
VPS33A-201ENST00000267199 FRMD8Q9BZ67 464 aaPredicted RBP11.93□□□□□ -0.5
VPS33A-201ENST00000267199 FHDC1Q9C0D6 1143 aaPredicted RBP11.93□□□□□ -0.5
VPS33A-201ENST00000267199 COPS7BQ9H9Q2 264 aaPredicted RBP11.93□□□□□ -0.5
VPS33A-201ENST00000267199 EFCAB1Q9HAE3 211 aa11.93□□□□□ -0.5
VPS33A-201ENST00000267199 CYLDQ9NQC7 956 aa11.93□□□□□ -0.5
VPS33A-201ENST00000267199 KCPQ6ZWJ8 1503 aa11.92□□□□□ -0.5
VPS33A-201ENST00000267199 HNRNPRO43390 633 aaKnown RBP11.92□□□□□ -0.5
VPS33A-201ENST00000267199 PTK2BQ14289 1009 aa11.92□□□□□ -0.5
VPS33A-201ENST00000267199 ASTE1Q2TB18 679 aaPredicted RBP11.92□□□□□ -0.5
VPS33A-201ENST00000267199 ZBTB49Q6ZSB9 765 aa11.92□□□□□ -0.5
VPS33A-201ENST00000267199 CCDC60Q8IWA6 550 aaPredicted RBP11.92□□□□□ -0.5
VPS33A-201ENST00000267199 ABI1Q8IZP0 508 aa11.92□□□□□ -0.5
VPS33A-201ENST00000267199 PCDHB18PQ96TA0 734 aa11.92□□□□□ -0.5
VPS33A-201ENST00000267199 BCAS3Q9H6U6 928 aa11.92□□□□□ -0.5
VPS33A-201ENST00000267199 ATP11BQ9Y2G3 1177 aa11.92□□□□□ -0.5
VPS33A-201ENST00000267199 SAC3D1A6NKF1 404 aa11.92□□□□□ -0.5
VPS33A-201ENST00000267199 DEAF1O75398 565 aaPredicted RBP11.92□□□□□ -0.5
VPS33A-201ENST00000267199 CDH8P55286 799 aa11.92□□□□□ -0.5
VPS33A-201ENST00000267199 PLIN5Q00G26 463 aa11.92□□□□□ -0.5
VPS33A-201ENST00000267199 TATDN1Q6P1N9 297 aa11.92□□□□□ -0.5
VPS33A-201ENST00000267199 ALYREFQ86V81 257 aaKnown RBP11.92□□□□□ -0.5
VPS33A-201ENST00000267199 CLVS1Q8IUQ0 354 aaPredicted RBP11.92□□□□□ -0.5
VPS33A-201ENST00000267199 ELMO2Q96JJ3 720 aa11.92□□□□□ -0.5
VPS33A-201ENST00000267199 CNPY3Q9BT09 278 aa11.92□□□□□ -0.5
VPS33A-201ENST00000267199 MRIQ9BWK5 157 aa11.92□□□□□ -0.5
VPS33A-201ENST00000267199 LRRC19Q9H756 370 aa11.92□□□□□ -0.5
VPS33A-201ENST00000267199 DFFAO00273 331 aa11.92□□□□□ -0.5
VPS33A-201ENST00000267199 PGK2P07205 417 aa11.92□□□□□ -0.5
VPS33A-201ENST00000267199 ANPEPP15144 967 aa11.92□□□□□ -0.5
VPS33A-201ENST00000267199 KCNA2P16389 499 aa11.92□□□□□ -0.5
VPS33A-201ENST00000267199 CLK2P49760 499 aaKnown RBP11.92□□□□□ -0.5
VPS33A-201ENST00000267199 ARHGDIAP52565 204 aa11.92□□□□□ -0.5
VPS33A-201ENST00000267199 ZNF268Q14587 947 aaPredicted RBP11.92□□□□□ -0.5
VPS33A-201ENST00000267199 NRF1Q16656 503 aa11.92□□□□□ -0.5
VPS33A-201ENST00000267199 SETD3Q86TU7 594 aaPredicted RBP11.92□□□□□ -0.5
VPS33A-201ENST00000267199 APPL2Q8NEU8 664 aa11.92□□□□□ -0.5
VPS33A-201ENST00000267199 KREMEN1Q96MU8 473 aa11.92□□□□□ -0.5
VPS33A-201ENST00000267199 CEP41Q9BYV8 373 aa11.92□□□□□ -0.5
VPS33A-201ENST00000267199 NKRFO15226 690 aaKnown RBP eCLIP11.91□□□□□ -0.5
VPS33A-201ENST00000267199 SNX2O60749 519 aa11.91□□□□□ -0.5
VPS33A-201ENST00000267199 VDRP11473 427 aa11.91□□□□□ -0.5
VPS33A-201ENST00000267199 CPA3P15088 417 aa11.91□□□□□ -0.5
VPS33A-201ENST00000267199 HADHAP40939 763 aa11.91□□□□□ -0.5
VPS33A-201ENST00000267199 TRABD2AQ86V40 505 aa11.91□□□□□ -0.5
VPS33A-201ENST00000267199 PCYOX1LQ8NBM8 494 aa11.91□□□□□ -0.5
VPS33A-201ENST00000267199 RNF217Q8TC41 542 aa11.91□□□□□ -0.5
VPS33A-201ENST00000267199 FAM172AQ8WUF8 416 aa11.91□□□□□ -0.5
VPS33A-201ENST00000267199 TLCD1Q96CP7 247 aa11.91□□□□□ -0.5
VPS33A-201ENST00000267199 VPS50Q96JG6 964 aa11.91□□□□□ -0.5
VPS33A-201ENST00000267199 CDRT15Q96T59 188 aa11.91□□□□□ -0.5
VPS33A-201ENST00000267199 SEMA6AQ9H2E6 1030 aa11.91□□□□□ -0.5
VPS33A-201ENST00000267199 CYP4F12Q9HCS2 524 aa11.91□□□□□ -0.5
VPS33A-201ENST00000267199 LRRC37A3O60309 1634 aa11.91□□□□□ -0.5
VPS33A-201ENST00000267199 ATP8B3O60423 1300 aa11.91□□□□□ -0.5
VPS33A-201ENST00000267199 DDX3YO15523 660 aaKnown RBP11.91□□□□□ -0.5
VPS33A-201ENST00000267199 GAS2O43903 313 aaKnown RBP11.91□□□□□ -0.5
VPS33A-201ENST00000267199 SP100P23497 879 aaPredicted RBP11.91□□□□□ -0.5
VPS33A-201ENST00000267199 HSPA13P48723 471 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms