RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 STOML1Q9UBI4 398 aa17.46■□□□□ 0.39
SQLE-201ENST00000265896 TEX264Q9Y6I9 313 aa17.46■□□□□ 0.39
SQLE-201ENST00000265896 A6NHS1 94 aa17.46■□□□□ 0.38
SQLE-201ENST00000265896 GPR25O00155 361 aa17.46■□□□□ 0.38
SQLE-201ENST00000265896 ITM2AO43736 263 aa17.46■□□□□ 0.38
SQLE-201ENST00000265896 FARP2O94887 1054 aaPredicted RBP17.46■□□□□ 0.38
SQLE-201ENST00000265896 ATG7O95352 703 aa17.46■□□□□ 0.38
SQLE-201ENST00000265896 POLR2BP30876 1174 aaKnown RBP17.46■□□□□ 0.38
SQLE-201ENST00000265896 SESN2P58004 480 aaPredicted RBP17.46■□□□□ 0.38
SQLE-201ENST00000265896 RTP1P59025 263 aa17.46■□□□□ 0.38
SQLE-201ENST00000265896 FAM183BPQ6ZVS7 135 aa17.46■□□□□ 0.38
SQLE-201ENST00000265896 PCGF5Q86SE9 256 aa17.46■□□□□ 0.38
SQLE-201ENST00000265896 RDM1Q8NG50 284 aa17.46■□□□□ 0.38
SQLE-201ENST00000265896 TEKT4Q8WW24 435 aa17.46■□□□□ 0.38
SQLE-201ENST00000265896 ZNF358Q9NW07 568 aa17.46■□□□□ 0.38
SQLE-201ENST00000265896 NFASCO94856 1347 aa17.45■□□□□ 0.38
SQLE-201ENST00000265896 SPDYE16A6NNV3 312 aaPredicted RBP17.45■□□□□ 0.38
SQLE-201ENST00000265896 LACTBL1A8MY62 500 aa17.45■□□□□ 0.38
SQLE-201ENST00000265896 H0YCG3 227 aa17.45■□□□□ 0.38
SQLE-201ENST00000265896 I3L4J1 428 aa17.45■□□□□ 0.38
SQLE-201ENST00000265896 SMAPO00193 183 aa17.45■□□□□ 0.38
SQLE-201ENST00000265896 PRPSAP2O60256 369 aa17.45■□□□□ 0.38
SQLE-201ENST00000265896 WFS1O76024 890 aa17.45■□□□□ 0.38
SQLE-201ENST00000265896 LUC7L3O95232 432 aaKnown RBP17.45■□□□□ 0.38
SQLE-201ENST00000265896 CYP3A5P20815 502 aa17.45■□□□□ 0.38
SQLE-201ENST00000265896 KCNA3P22001 575 aa17.45■□□□□ 0.38
SQLE-201ENST00000265896 SP100P23497 879 aaPredicted RBP17.45■□□□□ 0.38
SQLE-201ENST00000265896 VHLP40337 213 aa17.45■□□□□ 0.38
SQLE-201ENST00000265896 BCAR1P56945 870 aa17.45■□□□□ 0.38
SQLE-201ENST00000265896 PTPN11Q06124 597 aaPredicted RBP17.45■□□□□ 0.38
SQLE-201ENST00000265896 WASHC2DQ5SRD0 308 aa17.45■□□□□ 0.38
SQLE-201ENST00000265896 ATF7IP2Q5U623 682 aa17.45■□□□□ 0.38
SQLE-201ENST00000265896 RTKN2Q8IZC4 609 aa17.45■□□□□ 0.38
SQLE-201ENST00000265896 E2F7Q96AV8 911 aa17.45■□□□□ 0.38
SQLE-201ENST00000265896 DHRS4Q9BTZ2 278 aa17.45■□□□□ 0.38
SQLE-201ENST00000265896 CPSF3Q9UKF6 684 aaKnown RBP17.45■□□□□ 0.38
SQLE-201ENST00000265896 PPM1HQ9ULR3 514 aa17.45■□□□□ 0.38
SQLE-201ENST00000265896 LAMA2P24043 3122 aaKnown RBP17.45■□□□□ 0.38
SQLE-201ENST00000265896 NOP56O00567 594 aaKnown RBP17.45■□□□□ 0.38
SQLE-201ENST00000265896 TM9SF1O15321 606 aa17.45■□□□□ 0.38
SQLE-201ENST00000265896 MSX2P35548 267 aaPredicted RBP17.45■□□□□ 0.38
SQLE-201ENST00000265896 PPM1JQ5JR12 505 aa17.45■□□□□ 0.38
SQLE-201ENST00000265896 CEP128Q6ZU80 1094 aa17.45■□□□□ 0.38
SQLE-201ENST00000265896 CAND1Q86VP6 1230 aaKnown RBP17.45■□□□□ 0.38
SQLE-201ENST00000265896 ANKRD36BP1Q96IX9 119 aa17.45■□□□□ 0.38
SQLE-201ENST00000265896 MAN1C1Q9NR34 630 aa17.45■□□□□ 0.38
SQLE-201ENST00000265896 KRT82Q9NSB4 513 aa17.45■□□□□ 0.38
SQLE-201ENST00000265896 TTLL3Q9Y4R7 772 aa17.45■□□□□ 0.38
SQLE-201ENST00000265896 LSM8O95777 96 aaKnown RBP17.44■□□□□ 0.38
SQLE-201ENST00000265896 C6orf222P0C671 652 aaPredicted RBP17.44■□□□□ 0.38
SQLE-201ENST00000265896 C1orf146Q5VVC0 180 aa17.44■□□□□ 0.38
SQLE-201ENST00000265896 RIPOR1Q6ZS17 1223 aa17.44■□□□□ 0.38
SQLE-201ENST00000265896 DENND5BQ6ZUT9 1274 aa17.44■□□□□ 0.38
SQLE-201ENST00000265896 FLAD1Q8NFF5 587 aa17.44■□□□□ 0.38
SQLE-201ENST00000265896 TSC22D3Q99576 134 aa17.44■□□□□ 0.38
SQLE-201ENST00000265896 SEPT10Q9P0V9 454 aa17.44■□□□□ 0.38
SQLE-201ENST00000265896 C2CD2Q9Y426 696 aa17.44■□□□□ 0.38
SQLE-201ENST00000265896 RABGGTBP53611 331 aa17.44■□□□□ 0.38
SQLE-201ENST00000265896 TMEM62Q0P6H9 643 aa17.44■□□□□ 0.38
SQLE-201ENST00000265896 PPP2R5DQ14738 602 aa17.44■□□□□ 0.38
SQLE-201ENST00000265896 UNC5AQ6ZN44 842 aa17.44■□□□□ 0.38
SQLE-201ENST00000265896 PYROXD2Q8N2H3 581 aa17.44■□□□□ 0.38
SQLE-201ENST00000265896 PLD5Q8N7P1 536 aa17.44■□□□□ 0.38
SQLE-201ENST00000265896 ENDOVQ8N8Q3 282 aaKnown RBP17.44■□□□□ 0.38
SQLE-201ENST00000265896 NRBP2Q9NSY0 501 aa17.44■□□□□ 0.38
SQLE-201ENST00000265896 PLSCR1O15162 318 aa17.43■□□□□ 0.38
SQLE-201ENST00000265896 MAFGO15525 162 aa17.43■□□□□ 0.38
SQLE-201ENST00000265896 ETS2P15036 469 aa17.43■□□□□ 0.38
SQLE-201ENST00000265896 NDST1P52848 882 aa17.43■□□□□ 0.38
SQLE-201ENST00000265896 SLC34A1Q06495 639 aa17.43■□□□□ 0.38
SQLE-201ENST00000265896 GRIK3Q13003 919 aa17.43■□□□□ 0.38
SQLE-201ENST00000265896 GLRA4Q5JXX5 417 aa17.43■□□□□ 0.38
SQLE-201ENST00000265896 IZUMO2Q6UXV1 221 aa17.43■□□□□ 0.38
SQLE-201ENST00000265896 ATG14Q6ZNE5 492 aa17.43■□□□□ 0.38
SQLE-201ENST00000265896 SLC26A11Q86WA9 606 aa17.43■□□□□ 0.38
SQLE-201ENST00000265896 SMC1BQ8NDV3 1235 aa17.43■□□□□ 0.38
SQLE-201ENST00000265896 SH3TC2Q8TF17 1288 aa17.43■□□□□ 0.38
SQLE-201ENST00000265896 FBXO41Q8TF61 875 aa17.43■□□□□ 0.38
SQLE-201ENST00000265896 PGBD4Q96DM1 585 aa17.43■□□□□ 0.38
SQLE-201ENST00000265896 PANX3Q96QZ0 392 aa17.43■□□□□ 0.38
SQLE-201ENST00000265896 STRIP2Q9ULQ0 834 aa17.43■□□□□ 0.38
SQLE-201ENST00000265896 VTNP04004 478 aa17.43■□□□□ 0.38
SQLE-201ENST00000265896 GHRHRQ02643 423 aa17.43■□□□□ 0.38
SQLE-201ENST00000265896 FOXB2Q5VYV0 432 aa17.43■□□□□ 0.38
SQLE-201ENST00000265896 ACOT1Q86TX2 421 aa17.43■□□□□ 0.38
SQLE-201ENST00000265896 FBXO16Q8IX29 292 aaPredicted RBP17.43■□□□□ 0.38
SQLE-201ENST00000265896 PCDH19Q8TAB3 1148 aa17.43■□□□□ 0.38
SQLE-201ENST00000265896 FAM172AQ8WUF8 416 aa17.43■□□□□ 0.38
SQLE-201ENST00000265896 USP29Q9HBJ7 922 aa17.43■□□□□ 0.38
SQLE-201ENST00000265896 SAR1AQ9NR31 198 aa17.43■□□□□ 0.38
SQLE-201ENST00000265896 BTBD7Q9P203 1132 aa17.43■□□□□ 0.38
SQLE-201ENST00000265896 TSPAN16Q9UKR8 245 aa17.43■□□□□ 0.38
SQLE-201ENST00000265896 MTO1Q9Y2Z2 717 aaKnown RBP17.43■□□□□ 0.38
SQLE-201ENST00000265896 A0A1B0GVG6 124 aa17.43■□□□□ 0.38
SQLE-201ENST00000265896 HMX2A2RU54 273 aa17.43■□□□□ 0.38
SQLE-201ENST00000265896 E7ESA3 106 aa17.43■□□□□ 0.38
SQLE-201ENST00000265896 USP12O75317 370 aa17.43■□□□□ 0.38
SQLE-201ENST00000265896 RFPL1O75677 317 aa17.43■□□□□ 0.38
SQLE-201ENST00000265896 RARBP10826 455 aa17.43■□□□□ 0.38
SQLE-201ENST00000265896 OSBPP22059 807 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms