RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 KIF3CO14782 793 aa14.15□□□□□ -0.14
VMP1-201ENST00000262291 TTC4O95801 387 aa14.15□□□□□ -0.14
VMP1-201ENST00000262291 PTPN7P35236 360 aa14.15□□□□□ -0.14
VMP1-201ENST00000262291 CTCFP49711 727 aaPredicted RBP14.15□□□□□ -0.14
VMP1-201ENST00000262291 AUHQ13825 339 aaKnown RBP14.15□□□□□ -0.14
VMP1-201ENST00000262291 WLSQ5T9L3 541 aa14.15□□□□□ -0.14
VMP1-201ENST00000262291 ZNF473Q8WTR7 871 aaKnown RBP14.15□□□□□ -0.14
VMP1-201ENST00000262291 PCDH18Q9HCL0 1135 aa14.15□□□□□ -0.14
VMP1-201ENST00000262291 MLXIPLQ9NP71 852 aa14.15□□□□□ -0.14
VMP1-201ENST00000262291 KRT82Q9NSB4 513 aa14.15□□□□□ -0.14
VMP1-201ENST00000262291 HAUS2Q9NVX0 235 aa14.15□□□□□ -0.14
VMP1-201ENST00000262291 TPX2Q9ULW0 747 aaKnown RBP14.15□□□□□ -0.14
VMP1-201ENST00000262291 DCAF8L1A6NGE4 600 aa14.14□□□□□ -0.15
VMP1-201ENST00000262291 ITGAVP06756 1048 aa14.14□□□□□ -0.15
VMP1-201ENST00000262291 MAGEA4P43358 317 aa14.14□□□□□ -0.15
VMP1-201ENST00000262291 LMNB2Q03252 620 aa14.14□□□□□ -0.15
VMP1-201ENST00000262291 ITGA7Q13683 1181 aa14.14□□□□□ -0.15
VMP1-201ENST00000262291 LPIN1Q14693 890 aa14.14□□□□□ -0.15
VMP1-201ENST00000262291 SNCBQ16143 134 aa14.14□□□□□ -0.15
VMP1-201ENST00000262291 DCAF6Q58WW2 860 aa14.14□□□□□ -0.15
VMP1-201ENST00000262291 GPRIN1Q7Z2K8 1008 aa14.14□□□□□ -0.15
VMP1-201ENST00000262291 DEFB106AQ8N104 65 aa14.14□□□□□ -0.15
VMP1-201ENST00000262291 PCDH19Q8TAB3 1148 aa14.14□□□□□ -0.15
VMP1-201ENST00000262291 TLCD1Q96CP7 247 aa14.14□□□□□ -0.15
VMP1-201ENST00000262291 CAPNS2Q96L46 248 aa14.14□□□□□ -0.15
VMP1-201ENST00000262291 TACO1Q9BSH4 297 aaKnown RBP14.14□□□□□ -0.15
VMP1-201ENST00000262291 ITGB1P05556 798 aa14.14□□□□□ -0.15
VMP1-201ENST00000262291 CDC25CP30307 473 aa14.14□□□□□ -0.15
VMP1-201ENST00000262291 LRPAP1P30533 357 aa14.14□□□□□ -0.15
VMP1-201ENST00000262291 BASP1P80723 227 aaKnown RBP14.14□□□□□ -0.15
VMP1-201ENST00000262291 TAZQ16635 292 aa14.14□□□□□ -0.15
VMP1-201ENST00000262291 TIGD5Q53EQ6 642 aa14.14□□□□□ -0.15
VMP1-201ENST00000262291 TRMT10CQ7L0Y3 403 aaKnown RBP14.14□□□□□ -0.15
VMP1-201ENST00000262291 CYP4X1Q8N118 509 aa14.14□□□□□ -0.15
VMP1-201ENST00000262291 PQLC3Q8N755 202 aa14.14□□□□□ -0.15
VMP1-201ENST00000262291 MGARPQ8TDB4 240 aa14.14□□□□□ -0.15
VMP1-201ENST00000262291 TBC1D31Q96DN5 1066 aa14.14□□□□□ -0.15
VMP1-201ENST00000262291 TNIP3Q96KP6 325 aa14.14□□□□□ -0.15
VMP1-201ENST00000262291 DRG1Q9Y295 367 aaKnown RBP14.14□□□□□ -0.15
VMP1-201ENST00000262291 E7EVH7 732 aa14.14□□□□□ -0.15
VMP1-201ENST00000262291 MCF2LO15068 1137 aa14.14□□□□□ -0.15
VMP1-201ENST00000262291 B3GAT3O94766 335 aa14.14□□□□□ -0.15
VMP1-201ENST00000262291 WARSP23381 471 aaKnown RBP14.14□□□□□ -0.15
VMP1-201ENST00000262291 GBP2P32456 591 aaPredicted RBP14.14□□□□□ -0.15
VMP1-201ENST00000262291 HTRA3P83110 453 aa14.14□□□□□ -0.15
VMP1-201ENST00000262291 NME3Q13232 169 aa14.14□□□□□ -0.15
VMP1-201ENST00000262291 MSS51Q4VC12 460 aa14.14□□□□□ -0.15
VMP1-201ENST00000262291 RNASEH2BQ5TBB1 312 aaKnown RBP14.14□□□□□ -0.15
VMP1-201ENST00000262291 CYB5D1Q6P9G0 228 aa14.14□□□□□ -0.15
VMP1-201ENST00000262291 DRICH1Q6PGQ1 229 aaPredicted RBP14.14□□□□□ -0.15
VMP1-201ENST00000262291 PARP9Q8IXQ6 854 aa14.14□□□□□ -0.15
VMP1-201ENST00000262291 ZBED8Q8IZ13 594 aa14.14□□□□□ -0.15
VMP1-201ENST00000262291 P3H4Q92791 437 aa14.14□□□□□ -0.15
VMP1-201ENST00000262291 RNF157Q96PX1 679 aa14.14□□□□□ -0.15
VMP1-201ENST00000262291 TMEM209Q96SK2 561 aa14.14□□□□□ -0.15
VMP1-201ENST00000262291 RSAD1Q9HA92 442 aa14.14□□□□□ -0.15
VMP1-201ENST00000262291 SLC12A6Q9UHW9 1150 aa14.14□□□□□ -0.15
VMP1-201ENST00000262291 APOC4-APOC2K7ER74 178 aa14.13□□□□□ -0.15
VMP1-201ENST00000262291 NRP1O14786 923 aa14.13□□□□□ -0.15
VMP1-201ENST00000262291 GPR182O15218 404 aa14.13□□□□□ -0.15
VMP1-201ENST00000262291 APOC2P02655 101 aa14.13□□□□□ -0.15
VMP1-201ENST00000262291 SETSIPP0DME0 302 aa14.13□□□□□ -0.15
VMP1-201ENST00000262291 GCKP35557 465 aa14.13□□□□□ -0.15
VMP1-201ENST00000262291 PDIA2Q13087 525 aaKnown RBP14.13□□□□□ -0.15
VMP1-201ENST00000262291 CRYMQ14894 314 aa14.13□□□□□ -0.15
VMP1-201ENST00000262291 ACCSLQ4AC99 568 aa14.13□□□□□ -0.15
VMP1-201ENST00000262291 ANKRD20A8PQ5CZ79 823 aa14.13□□□□□ -0.15
VMP1-201ENST00000262291 FNBP1LQ5T0N5 605 aa14.13□□□□□ -0.15
VMP1-201ENST00000262291 SYPL2Q5VXT5 272 aa14.13□□□□□ -0.15
VMP1-201ENST00000262291 CCSAPQ6IQ19 270 aaPredicted RBP14.13□□□□□ -0.15
VMP1-201ENST00000262291 CLEC20AQ6ZU45 233 aa14.13□□□□□ -0.15
VMP1-201ENST00000262291 ZCCHC9Q8N567 271 aaKnown RBP14.13□□□□□ -0.15
VMP1-201ENST00000262291 TOP6BLQ8N6T0 577 aa14.13□□□□□ -0.15
VMP1-201ENST00000262291 PLD5Q8N7P1 536 aa14.13□□□□□ -0.15
VMP1-201ENST00000262291 KLHDC9Q8NEP7 349 aa14.13□□□□□ -0.15
VMP1-201ENST00000262291 SYT15Q9BQS2 421 aa14.13□□□□□ -0.15
VMP1-201ENST00000262291 DUSP16Q9BY84 665 aa14.13□□□□□ -0.15
VMP1-201ENST00000262291 PCDH9Q9HC56 1237 aa14.13□□□□□ -0.15
VMP1-201ENST00000262291 MRPL42Q9Y6G3 142 aaKnown RBP14.13□□□□□ -0.15
VMP1-201ENST00000262291 SULT1E1P49888 294 aa14.13□□□□□ -0.15
VMP1-201ENST00000262291 IFRD2Q12894 506 aaPredicted RBP14.13□□□□□ -0.15
VMP1-201ENST00000262291 ACAP1Q15027 740 aa14.13□□□□□ -0.15
VMP1-201ENST00000262291 LIMS2Q7Z4I7 341 aa14.13□□□□□ -0.15
VMP1-201ENST00000262291 SMC1BQ8NDV3 1235 aa14.13□□□□□ -0.15
VMP1-201ENST00000262291 CPT1BQ92523 772 aa14.13□□□□□ -0.15
VMP1-201ENST00000262291 PCED1BQ96HM7 432 aa14.13□□□□□ -0.15
VMP1-201ENST00000262291 CCT8L2Q96SF2 557 aa14.13□□□□□ -0.15
VMP1-201ENST00000262291 VPS37BQ9H9H4 285 aa14.13□□□□□ -0.15
VMP1-201ENST00000262291 KIF9Q9HAQ2 790 aa14.13□□□□□ -0.15
VMP1-201ENST00000262291 LRRC4Q9HBW1 653 aa14.13□□□□□ -0.15
VMP1-201ENST00000262291 ETNK2Q9NVF9 386 aa14.13□□□□□ -0.15
VMP1-201ENST00000262291 POC1B-GALNT4F8VUJ3 575 aa14.12□□□□□ -0.15
VMP1-201ENST00000262291 DPYSL4O14531 572 aa14.12□□□□□ -0.15
VMP1-201ENST00000262291 AP1G2O75843 785 aa14.12□□□□□ -0.15
VMP1-201ENST00000262291 TMEM63AO94886 807 aa14.12□□□□□ -0.15
VMP1-201ENST00000262291 NPR3P17342 541 aa14.12□□□□□ -0.15
VMP1-201ENST00000262291 IFNAR2P48551 515 aa14.12□□□□□ -0.15
VMP1-201ENST00000262291 TKTL1P51854 596 aa14.12□□□□□ -0.15
VMP1-201ENST00000262291 BCAR1P56945 870 aa14.12□□□□□ -0.15
VMP1-201ENST00000262291 ROR1Q01973 937 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms