RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 ZNF423Q2M1K9 1284 aa14.1□□□□□ -0.15
SGCA-201ENST00000262018 FBXO43Q4G163 708 aa14.1□□□□□ -0.15
SGCA-201ENST00000262018 TRIM68Q6AZZ1 485 aa14.1□□□□□ -0.15
SGCA-201ENST00000262018 CRELD2Q6UXH1 353 aaPredicted RBP14.1□□□□□ -0.15
SGCA-201ENST00000262018 ZNF662Q6ZS27 426 aa14.1□□□□□ -0.15
SGCA-201ENST00000262018 HDDC3Q8N4P3 179 aa14.1□□□□□ -0.15
SGCA-201ENST00000262018 ACDQ96AP0 544 aa14.1□□□□□ -0.15
SGCA-201ENST00000262018 CCDC42Q96M95 316 aa14.1□□□□□ -0.15
SGCA-201ENST00000262018 FAM213AQ9BRX8 229 aa14.1□□□□□ -0.15
SGCA-201ENST00000262018 MSTO1Q9BUK6 570 aa14.1□□□□□ -0.15
SGCA-201ENST00000262018 CCDC94Q9BW85 323 aaPredicted RBP14.1□□□□□ -0.15
SGCA-201ENST00000262018 TMEM8AQ9HCN3 771 aa14.1□□□□□ -0.15
SGCA-201ENST00000262018 AJAP1Q9UKB5 411 aaPredicted RBP14.1□□□□□ -0.15
SGCA-201ENST00000262018 RAXQ9Y2V3 346 aa14.1□□□□□ -0.15
SGCA-201ENST00000262018 COQ4Q9Y3A0 265 aa14.1□□□□□ -0.15
SGCA-201ENST00000262018 FREM2Q5SZK8 3169 aa14.1□□□□□ -0.15
SGCA-201ENST00000262018 UPK3BL1B0FP48 263 aa14.09□□□□□ -0.15
SGCA-201ENST00000262018 UPK3BL2E5RIL1 263 aa14.09□□□□□ -0.15
SGCA-201ENST00000262018 VNN2O95498 520 aa14.09□□□□□ -0.15
SGCA-201ENST00000262018 PRB1P04280 392 aa14.09□□□□□ -0.15
SGCA-201ENST00000262018 PLEKP08567 350 aaPredicted RBP14.09□□□□□ -0.15
SGCA-201ENST00000262018 OR4Q2P0C623 313 aa14.09□□□□□ -0.15
SGCA-201ENST00000262018 PRKCIP41743 596 aa14.09□□□□□ -0.15
SGCA-201ENST00000262018 ETF1P62495 437 aaKnown RBP14.09□□□□□ -0.15
SGCA-201ENST00000262018 CYP4F8P98187 520 aa14.09□□□□□ -0.15
SGCA-201ENST00000262018 AMPD2Q01433 879 aa14.09□□□□□ -0.15
SGCA-201ENST00000262018 RAPGEF1Q13905 1077 aa14.09□□□□□ -0.15
SGCA-201ENST00000262018 ASIC2Q16515 512 aa14.09□□□□□ -0.15
SGCA-201ENST00000262018 ASTE1Q2TB18 679 aaPredicted RBP14.09□□□□□ -0.15
SGCA-201ENST00000262018 NAIF1Q69YI7 327 aaPredicted RBP14.09□□□□□ -0.15
SGCA-201ENST00000262018 KRT39Q6A163 491 aa14.09□□□□□ -0.15
SGCA-201ENST00000262018 ARMCX6Q7L4S7 300 aa14.09□□□□□ -0.15
SGCA-201ENST00000262018 DNAJB7Q7Z6W7 309 aaPredicted RBP14.09□□□□□ -0.15
SGCA-201ENST00000262018 CEP120Q8N960 986 aa14.09□□□□□ -0.15
SGCA-201ENST00000262018 APPL2Q8NEU8 664 aa14.09□□□□□ -0.15
SGCA-201ENST00000262018 MDM1Q8TC05 714 aa14.09□□□□□ -0.15
SGCA-201ENST00000262018 SUSD3Q96L08 255 aa14.09□□□□□ -0.15
SGCA-201ENST00000262018 SPAG5Q96R06 1193 aa14.09□□□□□ -0.15
SGCA-201ENST00000262018 P2RY13Q9BPV8 354 aa14.09□□□□□ -0.15
SGCA-201ENST00000262018 FAM83CQ9BQN1 747 aa14.09□□□□□ -0.15
SGCA-201ENST00000262018 STK33Q9BYT3 514 aa14.09□□□□□ -0.15
SGCA-201ENST00000262018 CRISPLD1Q9H336 500 aa14.09□□□□□ -0.15
SGCA-201ENST00000262018 TASP1Q9H6P5 420 aa14.09□□□□□ -0.15
SGCA-201ENST00000262018 TOPORSQ9NS56 1045 aaPredicted RBP14.09□□□□□ -0.15
SGCA-201ENST00000262018 SLC38A7Q9NVC3 462 aa14.09□□□□□ -0.15
SGCA-201ENST00000262018 APEX2Q9UBZ4 518 aa14.09□□□□□ -0.15
SGCA-201ENST00000262018 APC2O95996 2303 aa14.09□□□□□ -0.15
SGCA-201ENST00000262018 NUP210Q8TEM1 1887 aaPredicted RBP14.08□□□□□ -0.15
SGCA-201ENST00000262018 LAMA5O15230 3695 aa14.08□□□□□ -0.15
SGCA-201ENST00000262018 FAM189A1O60320 539 aa14.08□□□□□ -0.15
SGCA-201ENST00000262018 FGF19O95750 216 aa14.08□□□□□ -0.15
SGCA-201ENST00000262018 CLTAP09496 248 aa14.08□□□□□ -0.15
SGCA-201ENST00000262018 ARHGAP25P42331 645 aa14.08□□□□□ -0.15
SGCA-201ENST00000262018 KIF11P52732 1056 aa14.08□□□□□ -0.15
SGCA-201ENST00000262018 ATXN3P54252 364 aaPredicted RBP14.08□□□□□ -0.15
SGCA-201ENST00000262018 YARSP54577 528 aaKnown RBP14.08□□□□□ -0.15
SGCA-201ENST00000262018 ANO7Q6IWH7 933 aa14.08□□□□□ -0.15
SGCA-201ENST00000262018 IRF2BP2Q7Z5L9 587 aa14.08□□□□□ -0.15
SGCA-201ENST00000262018 BEST2Q8NFU1 509 aa14.08□□□□□ -0.15
SGCA-201ENST00000262018 MYRIPQ8NFW9 859 aa14.08□□□□□ -0.15
SGCA-201ENST00000262018 CCDC127Q96BQ5 260 aa14.08□□□□□ -0.15
SGCA-201ENST00000262018 ACAP3Q96P50 834 aa14.08□□□□□ -0.15
SGCA-201ENST00000262018 GTPBP2Q9BX10 602 aaKnown RBP14.08□□□□□ -0.15
SGCA-201ENST00000262018 MBD1Q9UIS9 605 aaPredicted RBP14.08□□□□□ -0.15
SGCA-201ENST00000262018 DNAJC12Q9UKB3 198 aa14.08□□□□□ -0.15
SGCA-201ENST00000262018 SLC27A5Q9Y2P5 690 aa14.08□□□□□ -0.15
SGCA-201ENST00000262018 R3HCC1Q9Y3T6 440 aaKnown RBP14.08□□□□□ -0.15
SGCA-201ENST00000262018 BZW2Q9Y6E2 419 aaKnown RBP14.08□□□□□ -0.15
SGCA-201ENST00000262018 TRIP11Q15643 1979 aa14.08□□□□□ -0.16
SGCA-201ENST00000262018 A0A0U1RQJ8 604 aa14.07□□□□□ -0.16
SGCA-201ENST00000262018 IPO7O95373 1038 aaKnown RBP14.07□□□□□ -0.16
SGCA-201ENST00000262018 ARSAP15289 507 aa14.07□□□□□ -0.16
SGCA-201ENST00000262018 WEE1P30291 646 aa14.07□□□□□ -0.16
SGCA-201ENST00000262018 STAT1P42224 750 aa14.07□□□□□ -0.16
SGCA-201ENST00000262018 OSTNP61366 133 aa14.07□□□□□ -0.16
SGCA-201ENST00000262018 TDRD12Q587J7 1177 aaKnown RBP14.07□□□□□ -0.16
SGCA-201ENST00000262018 GJB7Q6PEY0 223 aa14.07□□□□□ -0.16
SGCA-201ENST00000262018 TTC30AQ86WT1 665 aa14.07□□□□□ -0.16
SGCA-201ENST00000262018 FMNL3Q8IVF7 1028 aa14.07□□□□□ -0.16
SGCA-201ENST00000262018 KIF18AQ8NI77 898 aa14.07□□□□□ -0.16
SGCA-201ENST00000262018 EXOC4Q96A65 974 aa14.07□□□□□ -0.16
SGCA-201ENST00000262018 DEF6Q9H4E7 631 aa14.07□□□□□ -0.16
SGCA-201ENST00000262018 SCUBE2Q9NQ36 999 aa14.07□□□□□ -0.16
SGCA-201ENST00000262018 FSCN3Q9NQT6 498 aa14.07□□□□□ -0.16
SGCA-201ENST00000262018 TMEM74BQ9NUR3 256 aa14.07□□□□□ -0.16
SGCA-201ENST00000262018 ASB3Q9Y575 518 aa14.07□□□□□ -0.16
SGCA-201ENST00000262018 BPTFQ12830 3046 aa14.07□□□□□ -0.16
SGCA-201ENST00000262018 MAP3K13O43283 966 aa14.07□□□□□ -0.16
SGCA-201ENST00000262018 AKR1B10O60218 316 aa14.07□□□□□ -0.16
SGCA-201ENST00000262018 SOAT2O75908 522 aa14.07□□□□□ -0.16
SGCA-201ENST00000262018 CFIP05156 583 aa14.07□□□□□ -0.16
SGCA-201ENST00000262018 FERP16591 822 aa14.07□□□□□ -0.16
SGCA-201ENST00000262018 ANXA13P27216 316 aa14.07□□□□□ -0.16
SGCA-201ENST00000262018 RPL9P32969 192 aaKnown RBP14.07□□□□□ -0.16
SGCA-201ENST00000262018 SOX5P35711 763 aa14.07□□□□□ -0.16
SGCA-201ENST00000262018 ACOT2P49753 483 aa14.07□□□□□ -0.16
SGCA-201ENST00000262018 POU5F1Q01860 360 aaKnown RBP14.07□□□□□ -0.16
SGCA-201ENST00000262018 KLHL30Q0D2K2 578 aa14.07□□□□□ -0.16
SGCA-201ENST00000262018 DRAP1Q14919 205 aaPredicted RBP14.07□□□□□ -0.16
SGCA-201ENST00000262018 SPA17Q15506 151 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms