RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 CPNE7Q9UBL6 633 aa5.9□□□□□ -1.46
TRA2B-201ENST00000259043 SPHKAPQ2M3C7 1700 aa5.9□□□□□ -1.47
TRA2B-201ENST00000259043 PIK3R4Q99570 1358 aa5.9□□□□□ -1.47
TRA2B-201ENST00000259043 MYOM3Q5VTT5 1437 aa5.9□□□□□ -1.47
TRA2B-201ENST00000259043 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.89□□□□□ -1.47
TRA2B-201ENST00000259043 TRIM43BA6NCK2 446 aa5.89□□□□□ -1.47
TRA2B-201ENST00000259043 GOLGA6CA6NDK9 693 aa5.89□□□□□ -1.47
TRA2B-201ENST00000259043 GOLGA6BA6NDN3 693 aa5.89□□□□□ -1.47
TRA2B-201ENST00000259043 GOLGA6DP0CG33 693 aa5.89□□□□□ -1.47
TRA2B-201ENST00000259043 SUMO3P55854 103 aaPredicted RBP5.89□□□□□ -1.47
TRA2B-201ENST00000259043 SRSF4Q08170 494 aaKnown RBP5.89□□□□□ -1.47
TRA2B-201ENST00000259043 HLTFQ14527 1009 aaKnown RBP eCLIP5.89□□□□□ -1.47
TRA2B-201ENST00000259043 CYP1B1Q16678 543 aa5.89□□□□□ -1.47
TRA2B-201ENST00000259043 CCSAPQ6IQ19 270 aaPredicted RBP5.89□□□□□ -1.47
TRA2B-201ENST00000259043 CHST15Q7LFX5 561 aaPredicted RBP5.89□□□□□ -1.47
TRA2B-201ENST00000259043 ZNF804AQ7Z570 1209 aa5.89□□□□□ -1.47
TRA2B-201ENST00000259043 CCDC146Q8IYE0 955 aa5.89□□□□□ -1.47
TRA2B-201ENST00000259043 MYO1HQ8N1T3 1032 aa5.89□□□□□ -1.47
TRA2B-201ENST00000259043 LRRC71Q8N4P6 559 aa5.89□□□□□ -1.47
TRA2B-201ENST00000259043 BPIFB1Q8TDL5 484 aa5.89□□□□□ -1.47
TRA2B-201ENST00000259043 OSCP1Q8WVF1 389 aa5.89□□□□□ -1.47
TRA2B-201ENST00000259043 LRRC59Q96AG4 307 aaKnown RBP5.89□□□□□ -1.47
TRA2B-201ENST00000259043 TRIM43Q96BQ3 446 aaPredicted RBP5.89□□□□□ -1.47
TRA2B-201ENST00000259043 NMD3Q96D46 503 aaKnown RBP5.89□□□□□ -1.47
TRA2B-201ENST00000259043 SUCLG2Q96I99 432 aa5.89□□□□□ -1.47
TRA2B-201ENST00000259043 CHMP4AQ9BY43 222 aa5.89□□□□□ -1.47
TRA2B-201ENST00000259043 GOLGA6AQ9NYA3 693 aa5.89□□□□□ -1.47
TRA2B-201ENST00000259043 ADAMTS5Q9UNA0 930 aa5.89□□□□□ -1.47
TRA2B-201ENST00000259043 TBC1D30Q9Y2I9 924 aa5.89□□□□□ -1.47
TRA2B-201ENST00000259043 BCL9LQ86UU0 1499 aa5.89□□□□□ -1.47
TRA2B-201ENST00000259043 UNC13BO14795 1591 aa5.89□□□□□ -1.47
TRA2B-201ENST00000259043 COL22A1Q8NFW1 1626 aaPredicted RBP5.88□□□□□ -1.47
TRA2B-201ENST00000259043 CFAP69A5D8W1 941 aa5.88□□□□□ -1.47
TRA2B-201ENST00000259043 ISM1B1AKI9 464 aa5.88□□□□□ -1.47
TRA2B-201ENST00000259043 TISP43B9A030 160 aa5.88□□□□□ -1.47
TRA2B-201ENST00000259043 QSOX1O00391 747 aa5.88□□□□□ -1.47
TRA2B-201ENST00000259043 CAND2O75155 1236 aa5.88□□□□□ -1.47
TRA2B-201ENST00000259043 VNN1O95497 513 aa5.88□□□□□ -1.47
TRA2B-201ENST00000259043 HRGP04196 525 aa5.88□□□□□ -1.47
TRA2B-201ENST00000259043 ZNF81P51508 661 aa5.88□□□□□ -1.47
TRA2B-201ENST00000259043 SATB1Q01826 763 aa5.88□□□□□ -1.47
TRA2B-201ENST00000259043 SLC10A2Q12908 348 aaPredicted RBP5.88□□□□□ -1.47
TRA2B-201ENST00000259043 GALEQ14376 348 aa5.88□□□□□ -1.47
TRA2B-201ENST00000259043 PTCHD3Q3KNS1 767 aa5.88□□□□□ -1.47
TRA2B-201ENST00000259043 ARHGAP29Q52LW3 1261 aa5.88□□□□□ -1.47
TRA2B-201ENST00000259043 PCID2Q5JVF3 399 aa5.88□□□□□ -1.47
TRA2B-201ENST00000259043 ZNF66Q6ZN08 573 aa5.88□□□□□ -1.47
TRA2B-201ENST00000259043 DEFB132Q7Z7B7 95 aa5.88□□□□□ -1.47
TRA2B-201ENST00000259043 IZUMO1Q8IYV9 350 aa5.88□□□□□ -1.47
TRA2B-201ENST00000259043 MPP5Q8N3R9 675 aa5.88□□□□□ -1.47
TRA2B-201ENST00000259043 Q8N9P0 234 aaPredicted RBP5.88□□□□□ -1.47
TRA2B-201ENST00000259043 FANCBQ8NB91 859 aa5.88□□□□□ -1.47
TRA2B-201ENST00000259043 XAGE5Q8WWM1 108 aa5.88□□□□□ -1.47
TRA2B-201ENST00000259043 LENG8Q96PV6 779 aaPredicted RBP5.88□□□□□ -1.47
TRA2B-201ENST00000259043 A1CFQ9NQ94 594 aaKnown RBP5.88□□□□□ -1.47
TRA2B-201ENST00000259043 SH3BP4Q9P0V3 963 aa5.88□□□□□ -1.47
TRA2B-201ENST00000259043 DNMT3BQ9UBC3 853 aaKnown RBP5.88□□□□□ -1.47
TRA2B-201ENST00000259043 TRPC5Q9UL62 973 aaPredicted RBP5.88□□□□□ -1.47
TRA2B-201ENST00000259043 PAXBP1Q9Y5B6 917 aa5.88□□□□□ -1.47
TRA2B-201ENST00000259043 KANK1Q14678 1352 aa5.88□□□□□ -1.47
TRA2B-201ENST00000259043 DAPK1P53355 1430 aa5.88□□□□□ -1.47
TRA2B-201ENST00000259043 RPRD2Q5VT52 1461 aaKnown RBP5.88□□□□□ -1.47
TRA2B-201ENST00000259043 BRWD3Q6RI45 1802 aa5.88□□□□□ -1.47
TRA2B-201ENST00000259043 MBD3L4A6NDZ8 208 aaPredicted RBP5.87□□□□□ -1.47
TRA2B-201ENST00000259043 MBD3L3A6NE82 208 aaPredicted RBP5.87□□□□□ -1.47
TRA2B-201ENST00000259043 PDE1AP54750 535 aa5.87□□□□□ -1.47
TRA2B-201ENST00000259043 GBX1Q14549 363 aa5.87□□□□□ -1.47
TRA2B-201ENST00000259043 GRM3Q14832 879 aa5.87□□□□□ -1.47
TRA2B-201ENST00000259043 TMEM119Q4V9L6 283 aa5.87□□□□□ -1.47
TRA2B-201ENST00000259043 SLC9A4Q6AI14 798 aa5.87□□□□□ -1.47
TRA2B-201ENST00000259043 NAPRTQ6XQN6 538 aa5.87□□□□□ -1.47
TRA2B-201ENST00000259043 ZNF366Q8N895 744 aa5.87□□□□□ -1.47
TRA2B-201ENST00000259043 FAM156AQ8NDB6 213 aa5.87□□□□□ -1.47
TRA2B-201ENST00000259043 TMEM171Q8WVE6 324 aa5.87□□□□□ -1.47
TRA2B-201ENST00000259043 PPP2R3CQ969Q6 453 aa5.87□□□□□ -1.47
TRA2B-201ENST00000259043 BHMT2Q9H2M3 363 aa5.87□□□□□ -1.47
TRA2B-201ENST00000259043 FAM204AQ9H8W3 233 aa5.87□□□□□ -1.47
TRA2B-201ENST00000259043 TPCN1Q9ULQ1 816 aa5.87□□□□□ -1.47
TRA2B-201ENST00000259043 GLI3P10071 1580 aa5.87□□□□□ -1.47
TRA2B-201ENST00000259043 PTPN23Q9H3S7 1636 aa5.87□□□□□ -1.47
TRA2B-201ENST00000259043 IQGAP3Q86VI3 1631 aa5.86□□□□□ -1.47
TRA2B-201ENST00000259043 MYOM2P54296 1465 aa5.86□□□□□ -1.47
TRA2B-201ENST00000259043 C1orf167Q5SNV9 1468 aa5.86□□□□□ -1.47
TRA2B-201ENST00000259043 BLMP54132 1417 aaPredicted RBP5.86□□□□□ -1.47
TRA2B-201ENST00000259043 PTCH1Q13635 1447 aa5.86□□□□□ -1.47
TRA2B-201ENST00000259043 ADGRL3Q9HAR2 1447 aa5.86□□□□□ -1.47
TRA2B-201ENST00000259043 METP08581 1390 aa5.86□□□□□ -1.47
TRA2B-201ENST00000259043 PYCARD-AS1I3L0S3 204 aa5.86□□□□□ -1.47
TRA2B-201ENST00000259043 TPP1O14773 563 aa5.86□□□□□ -1.47
TRA2B-201ENST00000259043 IKBKBO14920 756 aa5.86□□□□□ -1.47
TRA2B-201ENST00000259043 ZBED1O96006 694 aa5.86□□□□□ -1.47
TRA2B-201ENST00000259043 NPSP0C0P6 89 aa5.86□□□□□ -1.47
TRA2B-201ENST00000259043 MYF5P13349 255 aa5.86□□□□□ -1.47
TRA2B-201ENST00000259043 TPTEP56180 551 aa5.86□□□□□ -1.47
TRA2B-201ENST00000259043 SSBP2P81877 361 aaPredicted RBP5.86□□□□□ -1.47
TRA2B-201ENST00000259043 FMO1Q01740 532 aa5.86□□□□□ -1.47
TRA2B-201ENST00000259043 CNGA2Q16280 664 aa5.86□□□□□ -1.47
TRA2B-201ENST00000259043 RNF220Q5VTB9 566 aa5.86□□□□□ -1.47
TRA2B-201ENST00000259043 SRGAP1Q7Z6B7 1085 aa5.86□□□□□ -1.47
TRA2B-201ENST00000259043 CAND1Q86VP6 1230 aaKnown RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms