RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 TRPV4Q9HBA0 871 aa14.79□□□□□ -0.04
VPS25-201ENST00000253794 POPDC2Q9HBU9 364 aa14.79□□□□□ -0.04
VPS25-201ENST00000253794 PRDM6Q9NQX0 595 aa14.79□□□□□ -0.04
VPS25-201ENST00000253794 CHORDC1Q9UHD1 332 aaPredicted RBP14.79□□□□□ -0.04
VPS25-201ENST00000253794 TMEM59LQ9UK28 342 aa14.79□□□□□ -0.04
VPS25-201ENST00000253794 CDH7Q9ULB5 785 aa14.79□□□□□ -0.04
VPS25-201ENST00000253794 DOCK6Q96HP0 2047 aa14.78□□□□□ -0.04
VPS25-201ENST00000253794 MYO16Q9Y6X6 1858 aa14.78□□□□□ -0.04
VPS25-201ENST00000253794 ANKRD62A6NC57 917 aa14.78□□□□□ -0.04
VPS25-201ENST00000253794 SOWAHDA6NJG2 315 aa14.78□□□□□ -0.04
VPS25-201ENST00000253794 TLR5O60602 858 aa14.78□□□□□ -0.04
VPS25-201ENST00000253794 DAB1O75553 588 aa14.78□□□□□ -0.04
VPS25-201ENST00000253794 NDUFA10O95299 355 aa14.78□□□□□ -0.04
VPS25-201ENST00000253794 RALAP11233 206 aa14.78□□□□□ -0.04
VPS25-201ENST00000253794 TCF3P15923 654 aa14.78□□□□□ -0.04
VPS25-201ENST00000253794 SLC7A9P82251 487 aa14.78□□□□□ -0.04
VPS25-201ENST00000253794 CYP4F8P98187 520 aa14.78□□□□□ -0.04
VPS25-201ENST00000253794 TFF2Q03403 129 aa14.78□□□□□ -0.04
VPS25-201ENST00000253794 CCDC173Q0VFZ6 552 aa14.78□□□□□ -0.04
VPS25-201ENST00000253794 HECTD3Q5T447 861 aa14.78□□□□□ -0.04
VPS25-201ENST00000253794 OR6B2Q6IFH4 312 aa14.78□□□□□ -0.04
VPS25-201ENST00000253794 RAD9BQ6WBX8 426 aa14.78□□□□□ -0.04
VPS25-201ENST00000253794 HFE2Q6ZVN8 426 aa14.78□□□□□ -0.04
VPS25-201ENST00000253794 OTOP3Q7RTS5 596 aa14.78□□□□□ -0.04
VPS25-201ENST00000253794 TADA2BQ86TJ2 420 aa14.78□□□□□ -0.04
VPS25-201ENST00000253794 ATXN2LQ8WWM7 1075 aaKnown RBP14.78□□□□□ -0.04
VPS25-201ENST00000253794 NDRG1Q92597 394 aaKnown RBP14.78□□□□□ -0.04
VPS25-201ENST00000253794 SLC46A2Q9BY10 475 aa14.78□□□□□ -0.04
VPS25-201ENST00000253794 OLA1Q9NTK5 396 aaKnown RBP14.78□□□□□ -0.04
VPS25-201ENST00000253794 EPS15L1Q9UBC2 864 aa14.78□□□□□ -0.04
VPS25-201ENST00000253794 INTUQ9ULD6 942 aa14.78□□□□□ -0.04
VPS25-201ENST00000253794 EPN1Q9Y6I3 576 aaPredicted RBP14.78□□□□□ -0.04
VPS25-201ENST00000253794 ANAPC1Q9H1A4 1944 aa14.78□□□□□ -0.04
VPS25-201ENST00000253794 C2orf78A6NCI8 922 aa14.77□□□□□ -0.05
VPS25-201ENST00000253794 SIGLEC16A6NMB1 481 aa14.77□□□□□ -0.05
VPS25-201ENST00000253794 ARHGAP6O43182 974 aa14.77□□□□□ -0.05
VPS25-201ENST00000253794 RARGP13631 454 aa14.77□□□□□ -0.05
VPS25-201ENST00000253794 GJA1P17302 382 aa14.77□□□□□ -0.05
VPS25-201ENST00000253794 RRM1P23921 792 aa14.77□□□□□ -0.05
VPS25-201ENST00000253794 TCEAL1Q15170 157 aa14.77□□□□□ -0.05
VPS25-201ENST00000253794 C2CD6Q53TS8 623 aa14.77□□□□□ -0.05
VPS25-201ENST00000253794 STXBP5Q5T5C0 1151 aa14.77□□□□□ -0.05
VPS25-201ENST00000253794 GPR158Q5T848 1215 aa14.77□□□□□ -0.05
VPS25-201ENST00000253794 FAM102AQ5T9C2 384 aaPredicted RBP14.77□□□□□ -0.05
VPS25-201ENST00000253794 BTBD8Q5XKL5 378 aa14.77□□□□□ -0.05
VPS25-201ENST00000253794 TXNDC8Q6A555 127 aa14.77□□□□□ -0.05
VPS25-201ENST00000253794 GET4Q7L5D6 327 aaPredicted RBP14.77□□□□□ -0.05
VPS25-201ENST00000253794 CMTM8Q8IZV2 173 aa14.77□□□□□ -0.05
VPS25-201ENST00000253794 KIAA1958Q8N8K9 716 aa14.77□□□□□ -0.05
VPS25-201ENST00000253794 GOLGA1Q92805 767 aa14.77□□□□□ -0.05
VPS25-201ENST00000253794 NT5C3BQ969T7 300 aa14.77□□□□□ -0.05
VPS25-201ENST00000253794 MYADMQ96S97 322 aa14.77□□□□□ -0.05
VPS25-201ENST00000253794 CCSER2Q9H7U1 834 aa14.77□□□□□ -0.05
VPS25-201ENST00000253794 SPTLC3Q9NUV7 552 aa14.77□□□□□ -0.05
VPS25-201ENST00000253794 TMEM51Q9NW97 253 aa14.77□□□□□ -0.05
VPS25-201ENST00000253794 RRN3Q9NYV6 651 aa14.77□□□□□ -0.05
VPS25-201ENST00000253794 PRKAG3Q9UGI9 489 aa14.77□□□□□ -0.05
VPS25-201ENST00000253794 C5orf42Q9H799 3197 aa14.77□□□□□ -0.05
VPS25-201ENST00000253794 TRAV19A0A0A6YYK7 116 aa14.76□□□□□ -0.05
VPS25-201ENST00000253794 TMCO5BA8MYB1 307 aa14.76□□□□□ -0.05
VPS25-201ENST00000253794 COCHO43405 550 aa14.76□□□□□ -0.05
VPS25-201ENST00000253794 IGLV3-25P01717 112 aa14.76□□□□□ -0.05
VPS25-201ENST00000253794 CYP1A2P05177 515 aa14.76□□□□□ -0.05
VPS25-201ENST00000253794 TMEM253P0C7T8 217 aa14.76□□□□□ -0.05
VPS25-201ENST00000253794 LAMP2P13473 410 aa14.76□□□□□ -0.05
VPS25-201ENST00000253794 NOS2P35228 1153 aa14.76□□□□□ -0.05
VPS25-201ENST00000253794 GALCP54803 685 aa14.76□□□□□ -0.05
VPS25-201ENST00000253794 CCZ1BP86790 482 aa14.76□□□□□ -0.05
VPS25-201ENST00000253794 CCZ1P86791 482 aaPredicted RBP14.76□□□□□ -0.05
VPS25-201ENST00000253794 NNTQ13423 1086 aa14.76□□□□□ -0.05
VPS25-201ENST00000253794 MAMLD1Q13495 774 aa14.76□□□□□ -0.05
VPS25-201ENST00000253794 EIF4EBP2Q13542 120 aaPredicted RBP14.76□□□□□ -0.05
VPS25-201ENST00000253794 TAF5Q15542 800 aa14.76□□□□□ -0.05
VPS25-201ENST00000253794 DNAJC24Q6P3W2 148 aa14.76□□□□□ -0.05
VPS25-201ENST00000253794 BNIPLQ7Z465 357 aa14.76□□□□□ -0.05
VPS25-201ENST00000253794 ZDHHC14Q8IZN3 488 aa14.76□□□□□ -0.05
VPS25-201ENST00000253794 MAB21L3Q8N8X9 362 aa14.76□□□□□ -0.05
VPS25-201ENST00000253794 ING5Q8WYH8 240 aa14.76□□□□□ -0.05
VPS25-201ENST00000253794 ZNF653Q96CK0 615 aa14.76□□□□□ -0.05
VPS25-201ENST00000253794 ASB16Q96NS5 453 aa14.76□□□□□ -0.05
VPS25-201ENST00000253794 DDX23Q9BUQ8 820 aaKnown RBP14.76□□□□□ -0.05
VPS25-201ENST00000253794 SMOC2Q9H3U7 446 aa14.76□□□□□ -0.05
VPS25-201ENST00000253794 KIF9Q9HAQ2 790 aa14.76□□□□□ -0.05
VPS25-201ENST00000253794 PARVAQ9NVD7 372 aa14.76□□□□□ -0.05
VPS25-201ENST00000253794 OBP2AQ9NY56 170 aa14.76□□□□□ -0.05
VPS25-201ENST00000253794 ARHGAP26Q9UNA1 814 aa14.76□□□□□ -0.05
VPS25-201ENST00000253794 NR2E1Q9Y466 385 aa14.76□□□□□ -0.05
VPS25-201ENST00000253794 SCINQ9Y6U3 715 aa14.76□□□□□ -0.05
VPS25-201ENST00000253794 DOCK8Q8NF50 2099 aa14.76□□□□□ -0.05
VPS25-201ENST00000253794 C2CD4BA6NLJ0 364 aa14.75□□□□□ -0.05
VPS25-201ENST00000253794 H2AFZP0C0S5 128 aa14.75□□□□□ -0.05
VPS25-201ENST00000253794 KRT3P12035 628 aa14.75□□□□□ -0.05
VPS25-201ENST00000253794 HDCP19113 662 aa14.75□□□□□ -0.05
VPS25-201ENST00000253794 FCARP24071 287 aa14.75□□□□□ -0.05
VPS25-201ENST00000253794 ATP5C1P36542 298 aaKnown RBP14.75□□□□□ -0.05
VPS25-201ENST00000253794 MATKP42679 507 aa14.75□□□□□ -0.05
VPS25-201ENST00000253794 GPC5P78333 572 aa14.75□□□□□ -0.05
VPS25-201ENST00000253794 MTF1Q14872 753 aa14.75□□□□□ -0.05
VPS25-201ENST00000253794 H2AFVQ71UI9 128 aa14.75□□□□□ -0.05
VPS25-201ENST00000253794 DEFB106AQ8N104 65 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms