RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 TMEM175Q9BSA9 504 aa13.82□□□□□ -0.2
SLIRP-201ENST00000238688 LRRC19Q9H756 370 aa13.82□□□□□ -0.2
SLIRP-201ENST00000238688 VIPAS39Q9H9C1 493 aa13.82□□□□□ -0.2
SLIRP-201ENST00000238688 GOLGA2P5Q9HBQ8 144 aa13.82□□□□□ -0.2
SLIRP-201ENST00000238688 GDF3Q9NR23 364 aa13.82□□□□□ -0.2
SLIRP-201ENST00000238688 MARCH5Q9NX47 278 aa13.82□□□□□ -0.2
SLIRP-201ENST00000238688 DDX43Q9NXZ2 648 aaKnown RBP13.82□□□□□ -0.2
SLIRP-201ENST00000238688 CYTH4Q9UIA0 394 aa13.82□□□□□ -0.2
SLIRP-201ENST00000238688 MUTYHQ9UIF7 546 aa13.82□□□□□ -0.2
SLIRP-201ENST00000238688 C2CD4BA6NLJ0 364 aa13.81□□□□□ -0.2
SLIRP-201ENST00000238688 E5RJQ4 531 aa13.81□□□□□ -0.2
SLIRP-201ENST00000238688 LILRB3O75022 631 aa13.81□□□□□ -0.2
SLIRP-201ENST00000238688 HSF2BPO75031 334 aa13.81□□□□□ -0.2
SLIRP-201ENST00000238688 TJP3O95049 919 aa13.81□□□□□ -0.2
SLIRP-201ENST00000238688 POMCP01189 267 aa13.81□□□□□ -0.2
SLIRP-201ENST00000238688 FAM200BP0CF97 657 aa13.81□□□□□ -0.2
SLIRP-201ENST00000238688 RFC1P35251 1148 aaPredicted RBP13.81□□□□□ -0.2
SLIRP-201ENST00000238688 RPL7AP62424 266 aaKnown RBP13.81□□□□□ -0.2
SLIRP-201ENST00000238688 TSPY1Q01534 308 aa13.81□□□□□ -0.2
SLIRP-201ENST00000238688 PDE4CQ08493 712 aa13.81□□□□□ -0.2
SLIRP-201ENST00000238688 BOLA3Q53S33 107 aa13.81□□□□□ -0.2
SLIRP-201ENST00000238688 WSCD1Q658N2 575 aa13.81□□□□□ -0.2
SLIRP-201ENST00000238688 COLGALT2Q8IYK4 626 aa13.81□□□□□ -0.2
SLIRP-201ENST00000238688 RNF168Q8IYW5 571 aaPredicted RBP13.81□□□□□ -0.2
SLIRP-201ENST00000238688 C12orf29Q8N999 325 aa13.81□□□□□ -0.2
SLIRP-201ENST00000238688 TTC13Q8NBP0 860 aa13.81□□□□□ -0.2
SLIRP-201ENST00000238688 CCHCR1Q8TD31 782 aa13.81□□□□□ -0.2
SLIRP-201ENST00000238688 SLC22A17Q8WUG5 538 aa13.81□□□□□ -0.2
SLIRP-201ENST00000238688 FAM193BQ96PV7 902 aaPredicted RBP13.81□□□□□ -0.2
SLIRP-201ENST00000238688 PNKPQ96T60 521 aa13.81□□□□□ -0.2
SLIRP-201ENST00000238688 LRRC1Q9BTT6 524 aa13.81□□□□□ -0.2
SLIRP-201ENST00000238688 APOL5Q9BWW9 433 aa13.81□□□□□ -0.2
SLIRP-201ENST00000238688 PHF7Q9BWX1 381 aaPredicted RBP13.81□□□□□ -0.2
SLIRP-201ENST00000238688 ST7Q9NRC1 585 aa13.81□□□□□ -0.2
SLIRP-201ENST00000238688 FAM114A2Q9NRY5 505 aa13.81□□□□□ -0.2
SLIRP-201ENST00000238688 UTP11Q9Y3A2 253 aaKnown RBP13.81□□□□□ -0.2
SLIRP-201ENST00000238688 VWA8A3KMH1 1905 aa13.81□□□□□ -0.2
SLIRP-201ENST00000238688 DOCK8Q8NF50 2099 aa13.8□□□□□ -0.2
SLIRP-201ENST00000238688 PRR33A8MZF0 331 aa13.8□□□□□ -0.2
SLIRP-201ENST00000238688 BHMG1C9JSJ3 638 aaPredicted RBP13.8□□□□□ -0.2
SLIRP-201ENST00000238688 NRP1O14786 923 aa13.8□□□□□ -0.2
SLIRP-201ENST00000238688 HEXIM1O94992 359 aaKnown RBP13.8□□□□□ -0.2
SLIRP-201ENST00000238688 PYGMP11217 842 aa13.8□□□□□ -0.2
SLIRP-201ENST00000238688 SDC4P31431 198 aa13.8□□□□□ -0.2
SLIRP-201ENST00000238688 AIF1P55008 147 aa13.8□□□□□ -0.2
SLIRP-201ENST00000238688 VSNL1P62760 191 aa13.8□□□□□ -0.2
SLIRP-201ENST00000238688 RNASELQ05823 741 aaKnown RBP13.8□□□□□ -0.2
SLIRP-201ENST00000238688 ZNF252P-AS1Q0IIN9 211 aa13.8□□□□□ -0.2
SLIRP-201ENST00000238688 GPS2Q13227 327 aa13.8□□□□□ -0.2
SLIRP-201ENST00000238688 BEND6Q5SZJ8 279 aaPredicted RBP13.8□□□□□ -0.2
SLIRP-201ENST00000238688 CYP4A22Q5TCH4 519 aa13.8□□□□□ -0.2
SLIRP-201ENST00000238688 OR6B2Q6IFH4 312 aa13.8□□□□□ -0.2
SLIRP-201ENST00000238688 PMF1Q6P1K2 205 aa13.8□□□□□ -0.2
SLIRP-201ENST00000238688 FAM171BQ6P995 826 aa13.8□□□□□ -0.2
SLIRP-201ENST00000238688 CCNI2Q6ZMN8 369 aaPredicted RBP13.8□□□□□ -0.2
SLIRP-201ENST00000238688 C4orf50Q6ZRC1 276 aa13.8□□□□□ -0.2
SLIRP-201ENST00000238688 BEND5Q7L4P6 421 aa13.8□□□□□ -0.2
SLIRP-201ENST00000238688 HDXQ7Z353 690 aa13.8□□□□□ -0.2
SLIRP-201ENST00000238688 MAP7D3Q8IWC1 876 aa13.8□□□□□ -0.2
SLIRP-201ENST00000238688 FUKQ8N0W3 1084 aa13.8□□□□□ -0.2
SLIRP-201ENST00000238688 SLC2A14Q8TDB8 520 aa13.8□□□□□ -0.2
SLIRP-201ENST00000238688 IRGQQ8WZA9 623 aa13.8□□□□□ -0.2
SLIRP-201ENST00000238688 FUBP3Q96I24 572 aaKnown RBP eCLIP13.8□□□□□ -0.2
SLIRP-201ENST00000238688 BTBD6Q96KE9 485 aa13.8□□□□□ -0.2
SLIRP-201ENST00000238688 KRT12Q99456 494 aa13.8□□□□□ -0.2
SLIRP-201ENST00000238688 TSPYL1Q9H0U9 437 aa13.8□□□□□ -0.2
SLIRP-201ENST00000238688 CSNK1G1Q9HCP0 422 aa13.8□□□□□ -0.2
SLIRP-201ENST00000238688 CNGB3Q9NQW8 809 aa13.8□□□□□ -0.2
SLIRP-201ENST00000238688 METTL5Q9NRN9 209 aaKnown RBP13.8□□□□□ -0.2
SLIRP-201ENST00000238688 FAM49BQ9NUQ9 324 aa13.8□□□□□ -0.2
SLIRP-201ENST00000238688 F8W810 466 aa13.79□□□□□ -0.2
SLIRP-201ENST00000238688 GOLGA8SH3BPF8 625 aa13.79□□□□□ -0.2
SLIRP-201ENST00000238688 MDM4O15151 490 aa13.79□□□□□ -0.2
SLIRP-201ENST00000238688 LRCH4O75427 683 aa13.79□□□□□ -0.2
SLIRP-201ENST00000238688 OAZ2O95190 189 aa13.79□□□□□ -0.2
SLIRP-201ENST00000238688 GAS8O95995 478 aa13.79□□□□□ -0.2
SLIRP-201ENST00000238688 PDGFRAP16234 1089 aa13.79□□□□□ -0.2
SLIRP-201ENST00000238688 EPCAMP16422 314 aa13.79□□□□□ -0.2
SLIRP-201ENST00000238688 HOXB8P17481 243 aaPredicted RBP13.79□□□□□ -0.2
SLIRP-201ENST00000238688 LMO2P25791 158 aa13.79□□□□□ -0.2
SLIRP-201ENST00000238688 ZNF135P52742 658 aaPredicted RBP13.79□□□□□ -0.2
SLIRP-201ENST00000238688 SLC25A11Q02978 314 aaKnown RBP13.79□□□□□ -0.2
SLIRP-201ENST00000238688 KLF1Q13351 362 aaPredicted RBP13.79□□□□□ -0.2
SLIRP-201ENST00000238688 PDK2Q15119 407 aa13.79□□□□□ -0.2
SLIRP-201ENST00000238688 CCNG2Q16589 344 aa13.79□□□□□ -0.2
SLIRP-201ENST00000238688 NFE2Q16621 373 aaPredicted RBP13.79□□□□□ -0.2
SLIRP-201ENST00000238688 TAZQ16635 292 aa13.79□□□□□ -0.2
SLIRP-201ENST00000238688 TFDP3Q5H9I0 405 aa13.79□□□□□ -0.2
SLIRP-201ENST00000238688 INTS6LQ5JSJ4 861 aaKnown RBP13.79□□□□□ -0.2
SLIRP-201ENST00000238688 OVOS1Q6IE37 1185 aa13.79□□□□□ -0.2
SLIRP-201ENST00000238688 FAM183BPQ6ZVS7 135 aa13.79□□□□□ -0.2
SLIRP-201ENST00000238688 STRADAQ7RTN6 431 aa13.79□□□□□ -0.2
SLIRP-201ENST00000238688 TAS1R1Q7RTX1 841 aa13.79□□□□□ -0.2
SLIRP-201ENST00000238688 OSTM1Q86WC4 334 aa13.79□□□□□ -0.2
SLIRP-201ENST00000238688 DCP1BQ8IZD4 617 aaKnown RBP13.79□□□□□ -0.2
SLIRP-201ENST00000238688 UBA3Q8TBC4 463 aa13.79□□□□□ -0.2
SLIRP-201ENST00000238688 CASP10Q92851 521 aa13.79□□□□□ -0.2
SLIRP-201ENST00000238688 CAVIN3Q969G5 261 aa13.79□□□□□ -0.2
SLIRP-201ENST00000238688 CEP295NLQ96MC4 621 aa13.79□□□□□ -0.2
SLIRP-201ENST00000238688 COLEC11Q9BWP8 271 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms