RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 RCCD1A6NED2 376 aa28.54■■■□□ 2.16
CHMP4B-201ENST00000217402 CYP1A2P05177 515 aa28.54■■■□□ 2.16
CHMP4B-201ENST00000217402 PPP3CCP48454 512 aa28.54■■■□□ 2.16
CHMP4B-201ENST00000217402 VAV2P52735 878 aa28.54■■■□□ 2.16
CHMP4B-201ENST00000217402 MAFAQ8NHW3 353 aaPredicted RBP28.54■■■□□ 2.16
CHMP4B-201ENST00000217402 JOSD2Q8TAC2 188 aa28.54■■■□□ 2.16
CHMP4B-201ENST00000217402 ING5Q8WYH8 240 aa28.54■■■□□ 2.16
CHMP4B-201ENST00000217402 MRPS31Q92665 395 aaKnown RBP28.54■■■□□ 2.16
CHMP4B-201ENST00000217402 POPDC2Q9HBU9 364 aa28.54■■■□□ 2.16
CHMP4B-201ENST00000217402 TRPC7Q9HCX4 862 aa28.54■■■□□ 2.16
CHMP4B-201ENST00000217402 ASNSD1Q9NWL6 643 aa28.54■■■□□ 2.16
CHMP4B-201ENST00000217402 NUDT5Q9UKK9 219 aa28.54■■■□□ 2.16
CHMP4B-201ENST00000217402 INTUQ9ULD6 942 aa28.54■■■□□ 2.16
CHMP4B-201ENST00000217402 SCINQ9Y6U3 715 aa28.54■■■□□ 2.16
CHMP4B-201ENST00000217402 CLUHO75153 1309 aa28.53■■■□□ 2.16
CHMP4B-201ENST00000217402 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP28.53■■■□□ 2.16
CHMP4B-201ENST00000217402 CAPN9O14815 690 aa28.53■■■□□ 2.16
CHMP4B-201ENST00000217402 MOSPD3O75425 235 aa28.53■■■□□ 2.16
CHMP4B-201ENST00000217402 GLI1P08151 1106 aa28.53■■■□□ 2.16
CHMP4B-201ENST00000217402 RARGP13631 454 aa28.53■■■□□ 2.16
CHMP4B-201ENST00000217402 PSEN1P49768 467 aa28.53■■■□□ 2.16
CHMP4B-201ENST00000217402 TEAD2Q15562 447 aa28.53■■■□□ 2.16
CHMP4B-201ENST00000217402 STXBP5Q5T5C0 1151 aa28.53■■■□□ 2.16
CHMP4B-201ENST00000217402 DCUN1D2Q6PH85 259 aa28.53■■■□□ 2.16
CHMP4B-201ENST00000217402 ITFG1Q8TB96 612 aa28.53■■■□□ 2.16
CHMP4B-201ENST00000217402 HLA-CQ95604 372 aa28.53■■■□□ 2.16
CHMP4B-201ENST00000217402 RIPOR3Q96MK2 946 aa28.53■■■□□ 2.16
CHMP4B-201ENST00000217402 NUP85Q9BW27 656 aa28.53■■■□□ 2.16
CHMP4B-201ENST00000217402 CCSER2Q9H7U1 834 aa28.53■■■□□ 2.16
CHMP4B-201ENST00000217402 WDR6Q9NNW5 1121 aaKnown RBP28.53■■■□□ 2.16
CHMP4B-201ENST00000217402 ABCC13Q9NSE7 274 aa28.53■■■□□ 2.16
CHMP4B-201ENST00000217402 TMEM59LQ9UK28 342 aa28.53■■■□□ 2.16
CHMP4B-201ENST00000217402 NAALADL1Q9UQQ1 740 aa28.53■■■□□ 2.16
CHMP4B-201ENST00000217402 XIRP2A4UGR9 3374 aa28.53■■■□□ 2.16
CHMP4B-201ENST00000217402 A0A0U1RQJ8 604 aa28.52■■■□□ 2.16
CHMP4B-201ENST00000217402 C2orf78A6NCI8 922 aa28.52■■■□□ 2.16
CHMP4B-201ENST00000217402 SIGLEC16A6NMB1 481 aa28.52■■■□□ 2.16
CHMP4B-201ENST00000217402 ZNF197O14709 1029 aa28.52■■■□□ 2.16
CHMP4B-201ENST00000217402 DAB1O75553 588 aa28.52■■■□□ 2.16
CHMP4B-201ENST00000217402 FYNP06241 537 aa28.52■■■□□ 2.16
CHMP4B-201ENST00000217402 NCAM1P13591 858 aa28.52■■■□□ 2.16
CHMP4B-201ENST00000217402 CEBPBP17676 345 aa28.52■■■□□ 2.16
CHMP4B-201ENST00000217402 FLT3P36888 993 aa28.52■■■□□ 2.16
CHMP4B-201ENST00000217402 RPL7AP62424 266 aaKnown RBP28.52■■■□□ 2.16
CHMP4B-201ENST00000217402 PPP1R15BQ5SWA1 713 aa28.52■■■□□ 2.16
CHMP4B-201ENST00000217402 TXNDC8Q6A555 127 aa28.52■■■□□ 2.16
CHMP4B-201ENST00000217402 RSRC2Q7L4I2 434 aaKnown RBP28.52■■■□□ 2.16
CHMP4B-201ENST00000217402 DEFB106AQ8N104 65 aa28.52■■■□□ 2.16
CHMP4B-201ENST00000217402 ATRIPQ8WXE1 791 aa28.52■■■□□ 2.16
CHMP4B-201ENST00000217402 MRPL47Q9HD33 250 aaKnown RBP28.52■■■□□ 2.16
CHMP4B-201ENST00000217402 MTPAPQ9NVV4 582 aaKnown RBP eCLIP28.52■■■□□ 2.162e-6■□□□□ 10.4
CHMP4B-201ENST00000217402 CLIC5Q9NZA1 410 aa28.52■■■□□ 2.16
CHMP4B-201ENST00000217402 CTTNBP2NLQ9P2B4 639 aa28.52■■■□□ 2.16
CHMP4B-201ENST00000217402 NOTCH4Q99466 2003 aa28.51■■■□□ 2.16
CHMP4B-201ENST00000217402 TLR5O60602 858 aa28.51■■■□□ 2.15
CHMP4B-201ENST00000217402 CCDC175P0C221 793 aa28.51■■■□□ 2.15
CHMP4B-201ENST00000217402 RALAP11233 206 aa28.51■■■□□ 2.15
CHMP4B-201ENST00000217402 FSHRP23945 695 aa28.51■■■□□ 2.15
CHMP4B-201ENST00000217402 RFC1P35251 1148 aaPredicted RBP28.51■■■□□ 2.15
CHMP4B-201ENST00000217402 DCAF6Q58WW2 860 aa28.51■■■□□ 2.15
CHMP4B-201ENST00000217402 SNX30Q5VWJ9 437 aa28.51■■■□□ 2.15
CHMP4B-201ENST00000217402 GET4Q7L5D6 327 aaPredicted RBP28.51■■■□□ 2.15
CHMP4B-201ENST00000217402 USP15Q9Y4E8 981 aaPredicted RBP28.51■■■□□ 2.15
CHMP4B-201ENST00000217402 HECTD3Q5T447 861 aa28.51■■■□□ 2.15
CHMP4B-201ENST00000217402 SYPL2Q5VXT5 272 aa28.51■■■□□ 2.15
CHMP4B-201ENST00000217402 TRNP1Q6NT89 227 aa28.51■■■□□ 2.15
CHMP4B-201ENST00000217402 RNF139Q8WU17 664 aa28.51■■■□□ 2.15
CHMP4B-201ENST00000217402 SLC2A13Q96QE2 648 aa28.51■■■□□ 2.15
CHMP4B-201ENST00000217402 TRIM62Q9BVG3 475 aa28.51■■■□□ 2.15
CHMP4B-201ENST00000217402 TRIM7Q9C029 511 aa28.51■■■□□ 2.15
CHMP4B-201ENST00000217402 LACRTQ9GZZ8 138 aa28.51■■■□□ 2.15
CHMP4B-201ENST00000217402 SLITRK6Q9H5Y7 841 aa28.51■■■□□ 2.15
CHMP4B-201ENST00000217402 PYCARDQ9ULZ3 195 aa28.51■■■□□ 2.15
CHMP4B-201ENST00000217402 TBX18O95935 607 aa28.5■■■□□ 2.15
CHMP4B-201ENST00000217402 MTHFRP42898 656 aa28.5■■■□□ 2.15
CHMP4B-201ENST00000217402 ARHGAP15Q53QZ3 475 aa28.5■■■□□ 2.15
CHMP4B-201ENST00000217402 C10orf120Q5SQS8 335 aa28.5■■■□□ 2.15
CHMP4B-201ENST00000217402 GPR158Q5T848 1215 aa28.5■■■□□ 2.15
CHMP4B-201ENST00000217402 MAB21L3Q8N8X9 362 aa28.5■■■□□ 2.15
CHMP4B-201ENST00000217402 RFFLQ8WZ73 363 aa28.5■■■□□ 2.15
CHMP4B-201ENST00000217402 NACA2Q9H009 215 aa28.5■■■□□ 2.15
CHMP4B-201ENST00000217402 OSGEPQ9NPF4 335 aa28.5■■■□□ 2.15
CHMP4B-201ENST00000217402 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP28.5■■■□□ 2.155e-11■■■□□ 18.5
CHMP4B-201ENST00000217402 OBSL1O75147 1896 aa28.5■■■□□ 2.15
CHMP4B-201ENST00000217402 SLC35G2Q8TBE7 412 aa28.49■■■□□ 2.15
CHMP4B-201ENST00000217402 ZNF564Q8TBZ8 553 aaPredicted RBP28.49■■■□□ 2.15
CHMP4B-201ENST00000217402 POMKQ9H5K3 350 aa28.49■■■□□ 2.15
CHMP4B-201ENST00000217402 COG5Q9UP83 839 aa28.49■■■□□ 2.15
CHMP4B-201ENST00000217402 PPP2R2CQ9Y2T4 447 aa28.49■■■□□ 2.15
CHMP4B-201ENST00000217402 MDM4O15151 490 aa28.48■■■□□ 2.15
CHMP4B-201ENST00000217402 COCHO43405 550 aa28.48■■■□□ 2.15
CHMP4B-201ENST00000217402 OAS1P00973 400 aaKnown RBP28.48■■■□□ 2.15
CHMP4B-201ENST00000217402 MATKP42679 507 aa28.48■■■□□ 2.15
CHMP4B-201ENST00000217402 TXLNBQ8N3L3 684 aa28.48■■■□□ 2.15
CHMP4B-201ENST00000217402 RXFP2Q8WXD0 754 aa28.48■■■□□ 2.15
CHMP4B-201ENST00000217402 CFAP57Q96MR6 1250 aa28.48■■■□□ 2.15
CHMP4B-201ENST00000217402 UVRAGQ9P2Y5 699 aa28.48■■■□□ 2.15
CHMP4B-201ENST00000217402 TRIM10Q9UDY6 481 aa28.48■■■□□ 2.15
CHMP4B-201ENST00000217402 DUSP10Q9Y6W6 482 aa28.48■■■□□ 2.15
CHMP4B-201ENST00000217402 SPTBN5Q9NRC6 3674 aaKnown RBP28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms