RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 CYB561D2O14569 222 aa12.8□□□□□ -0.36
TM9SF4-201ENST00000217315 TM9SF1O15321 606 aa12.8□□□□□ -0.36
TM9SF4-201ENST00000217315 GNASQ5JWF2 1037 aa12.8□□□□□ -0.36
TM9SF4-201ENST00000217315 MAP3K21Q5TCX8 1036 aa12.8□□□□□ -0.36
TM9SF4-201ENST00000217315 NETO2Q8NC67 525 aa12.8□□□□□ -0.36
TM9SF4-201ENST00000217315 ADAM32Q8TC27 787 aa12.8□□□□□ -0.36
TM9SF4-201ENST00000217315 C12orf65Q9H3J6 166 aaKnown RBP12.8□□□□□ -0.36
TM9SF4-201ENST00000217315 ANGPTL2Q9UKU9 493 aa12.8□□□□□ -0.36
TM9SF4-201ENST00000217315 SNCAIPQ9Y6H5 919 aa12.8□□□□□ -0.36
TM9SF4-201ENST00000217315 AP1G2O75843 785 aa12.79□□□□□ -0.36
TM9SF4-201ENST00000217315 PNPLA4P41247 253 aa12.79□□□□□ -0.36
TM9SF4-201ENST00000217315 ADIGQ0VDE8 80 aa12.79□□□□□ -0.36
TM9SF4-201ENST00000217315 ANKRD22Q5VYY1 191 aa12.79□□□□□ -0.36
TM9SF4-201ENST00000217315 CRELD2Q6UXH1 353 aaPredicted RBP12.79□□□□□ -0.36
TM9SF4-201ENST00000217315 TSHZ1Q6ZSZ6 1077 aa12.79□□□□□ -0.36
TM9SF4-201ENST00000217315 EXT2Q93063 718 aa12.79□□□□□ -0.36
TM9SF4-201ENST00000217315 NKD2Q969F2 451 aaPredicted RBP12.79□□□□□ -0.36
TM9SF4-201ENST00000217315 SRPK1Q96SB4 655 aaKnown RBP12.79□□□□□ -0.36
TM9SF4-201ENST00000217315 TBCBQ99426 244 aa12.79□□□□□ -0.36
TM9SF4-201ENST00000217315 ATP4AP20648 1035 aa12.79□□□□□ -0.36
TM9SF4-201ENST00000217315 MAP3K7CLP57077 242 aa12.79□□□□□ -0.36
TM9SF4-201ENST00000217315 TSPY1Q01534 308 aa12.79□□□□□ -0.36
TM9SF4-201ENST00000217315 SEC14L1Q92503 715 aa12.79□□□□□ -0.36
TM9SF4-201ENST00000217315 TMEM120AQ9BXJ8 343 aa12.79□□□□□ -0.36
TM9SF4-201ENST00000217315 CCDC68Q9H2F9 335 aa12.79□□□□□ -0.36
TM9SF4-201ENST00000217315 SDR42E2A6NKP2 422 aa12.79□□□□□ -0.36
TM9SF4-201ENST00000217315 HNRNPCL1O60812 293 aaKnown RBP12.79□□□□□ -0.36
TM9SF4-201ENST00000217315 ARIH2O95376 493 aa12.79□□□□□ -0.36
TM9SF4-201ENST00000217315 WNT7BP56706 349 aa12.79□□□□□ -0.36
TM9SF4-201ENST00000217315 GRAMD1BQ3KR37 738 aa12.79□□□□□ -0.36
TM9SF4-201ENST00000217315 PPP1R26Q5T8A7 1209 aaPredicted RBP12.79□□□□□ -0.36
TM9SF4-201ENST00000217315 CES3Q6UWW8 571 aa12.79□□□□□ -0.36
TM9SF4-201ENST00000217315 PRPF39Q86UA1 669 aaKnown RBP12.79□□□□□ -0.36
TM9SF4-201ENST00000217315 ZDHHC14Q8IZN3 488 aa12.79□□□□□ -0.36
TM9SF4-201ENST00000217315 DEFB106AQ8N104 65 aa12.79□□□□□ -0.36
TM9SF4-201ENST00000217315 THEM5Q8N1Q8 247 aa12.79□□□□□ -0.36
TM9SF4-201ENST00000217315 COLGALT1Q8NBJ5 622 aa12.79□□□□□ -0.36
TM9SF4-201ENST00000217315 GTF3C2Q8WUA4 911 aaPredicted RBP12.79□□□□□ -0.36
TM9SF4-201ENST00000217315 SYT11Q9BT88 431 aa12.79□□□□□ -0.36
TM9SF4-201ENST00000217315 VTA1Q9NP79 307 aa12.79□□□□□ -0.36
TM9SF4-201ENST00000217315 KIAA1551Q9HCM1 1747 aa12.79□□□□□ -0.36
TM9SF4-201ENST00000217315 LAMB1P07942 1786 aa12.79□□□□□ -0.36
TM9SF4-201ENST00000217315 NEMP1O14524 444 aa12.78□□□□□ -0.36
TM9SF4-201ENST00000217315 B3GAT3O94766 335 aa12.78□□□□□ -0.36
TM9SF4-201ENST00000217315 NRLP54845 237 aa12.78□□□□□ -0.36
TM9SF4-201ENST00000217315 CRADDP78560 199 aa12.78□□□□□ -0.36
TM9SF4-201ENST00000217315 ART3Q13508 389 aa12.78□□□□□ -0.36
TM9SF4-201ENST00000217315 RASIP1Q5U651 963 aa12.78□□□□□ -0.36
TM9SF4-201ENST00000217315 BTBD8Q5XKL5 378 aa12.78□□□□□ -0.36
TM9SF4-201ENST00000217315 C4orf22Q6V702 233 aa12.78□□□□□ -0.36
TM9SF4-201ENST00000217315 PLEKHH3Q7Z736 793 aa12.78□□□□□ -0.36
TM9SF4-201ENST00000217315 XYLT1Q86Y38 959 aa12.78□□□□□ -0.36
TM9SF4-201ENST00000217315 CPT1BQ92523 772 aa12.78□□□□□ -0.36
TM9SF4-201ENST00000217315 LHX5Q9H2C1 402 aa12.78□□□□□ -0.36
TM9SF4-201ENST00000217315 ACSS3Q9H6R3 686 aa12.78□□□□□ -0.36
TM9SF4-201ENST00000217315 C20orf96Q9NUD7 363 aaPredicted RBP12.78□□□□□ -0.36
TM9SF4-201ENST00000217315 ARMCX1Q9P291 453 aa12.78□□□□□ -0.36
TM9SF4-201ENST00000217315 CPA4Q9UI42 421 aa12.78□□□□□ -0.36
TM9SF4-201ENST00000217315 MAST2Q6P0Q8 1798 aa12.78□□□□□ -0.36
TM9SF4-201ENST00000217315 SETSIPP0DME0 302 aa12.78□□□□□ -0.36
TM9SF4-201ENST00000217315 TAC1P20366 129 aa12.78□□□□□ -0.36
TM9SF4-201ENST00000217315 TGM2P21980 687 aa12.78□□□□□ -0.36
TM9SF4-201ENST00000217315 SERPINB3P29508 390 aa12.78□□□□□ -0.36
TM9SF4-201ENST00000217315 COG7P83436 770 aa12.78□□□□□ -0.36
TM9SF4-201ENST00000217315 PDK4Q16654 411 aa12.78□□□□□ -0.36
TM9SF4-201ENST00000217315 OR6P1Q8NGX9 317 aa12.78□□□□□ -0.36
TM9SF4-201ENST00000217315 SLC26A7Q8TE54 656 aa12.78□□□□□ -0.36
TM9SF4-201ENST00000217315 OSBPL1AQ9BXW6 950 aa12.78□□□□□ -0.36
TM9SF4-201ENST00000217315 UBP1Q9NZI7 540 aa12.78□□□□□ -0.36
TM9SF4-201ENST00000217315 BCAP29Q9UHQ4 241 aa12.78□□□□□ -0.36
TM9SF4-201ENST00000217315 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.78□□□□□ -0.36
TM9SF4-201ENST00000217315 KAT6AQ92794 2004 aa12.78□□□□□ -0.36
TM9SF4-201ENST00000217315 C3orf70A6NLC5 250 aaPredicted RBP12.78□□□□□ -0.36
TM9SF4-201ENST00000217315 AQP5P55064 265 aa12.78□□□□□ -0.36
TM9SF4-201ENST00000217315 SLC1A5Q15758 541 aa12.78□□□□□ -0.36
TM9SF4-201ENST00000217315 FASTKD1Q53R41 847 aaKnown RBP12.78□□□□□ -0.36
TM9SF4-201ENST00000217315 NLGN2Q8NFZ4 835 aa12.78□□□□□ -0.36
TM9SF4-201ENST00000217315 HDAC11Q96DB2 347 aa12.78□□□□□ -0.36
TM9SF4-201ENST00000217315 ABHD16BQ9H3Z7 469 aa12.78□□□□□ -0.36
TM9SF4-201ENST00000217315 IPO11Q9UI26 975 aaKnown RBP12.78□□□□□ -0.36
TM9SF4-201ENST00000217315 SCOCQ9UIL1 159 aa12.78□□□□□ -0.36
TM9SF4-201ENST00000217315 TCRBV9S1A1TA0A576 114 aa12.78□□□□□ -0.36
TM9SF4-201ENST00000217315 PABPN1LA6NDY0 278 aaKnown RBP12.78□□□□□ -0.36
TM9SF4-201ENST00000217315 USP12O75317 370 aa12.78□□□□□ -0.36
TM9SF4-201ENST00000217315 HOXC6P09630 235 aa12.78□□□□□ -0.36
TM9SF4-201ENST00000217315 GDF10P55107 478 aa12.78□□□□□ -0.36
TM9SF4-201ENST00000217315 RPL10AP62906 217 aaKnown RBP12.78□□□□□ -0.36
TM9SF4-201ENST00000217315 OGDHQ02218 1023 aa12.78□□□□□ -0.36
TM9SF4-201ENST00000217315 LRRC36Q1X8D7 754 aa12.78□□□□□ -0.36
TM9SF4-201ENST00000217315 PRAMEF19Q5SWL8 479 aa12.78□□□□□ -0.36
TM9SF4-201ENST00000217315 ZCCHC23Q6ZST2 131 aa12.78□□□□□ -0.36
TM9SF4-201ENST00000217315 SLC4A11Q8NBS3 891 aa12.78□□□□□ -0.36
TM9SF4-201ENST00000217315 GSDMBQ8TAX9 411 aa12.78□□□□□ -0.36
TM9SF4-201ENST00000217315 APOPT1Q96IL0 206 aa12.78□□□□□ -0.36
TM9SF4-201ENST00000217315 CXorf56Q9H5V9 222 aa12.78□□□□□ -0.36
TM9SF4-201ENST00000217315 GTSE1Q9NYZ3 720 aa12.78□□□□□ -0.36
TM9SF4-201ENST00000217315 CILPO75339 1184 aa12.77□□□□□ -0.36
TM9SF4-201ENST00000217315 PIGRP01833 764 aa12.77□□□□□ -0.36
TM9SF4-201ENST00000217315 SPRP35270 261 aaPredicted RBP12.77□□□□□ -0.36
TM9SF4-201ENST00000217315 FDFT1P37268 417 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms