RNA–Protein interactions for RNA: ENSMUST00000201711.3

Pdgfra-205, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 4,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-205ENSMUST00000201711 C2cd2lQ80X80 706 aa13.71□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Rabep2Q91WG2 554 aa13.71□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Thg1lQ9CY52 298 aa13.71□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Drg2Q9QXB9 364 aaKnown RBP13.71□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 PdgfraP26618 1089 aa13.7□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 PorP37040 678 aa13.7□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Ndrg1Q62433 394 aa13.7□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Stx3Q64704 289 aa13.7□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Pak5Q8C015 719 aa13.7□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Slc12a6Q924N4 1150 aa13.7□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Nxnl2Q9D531 156 aa13.7□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Zmynd8A2A484 1235 aaKnown RBP13.7□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Krt28A6BLY7 462 aa13.7□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Sh2d4bA6X942 431 aa13.7□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Ccdc144bE9PVZ3 520 aa13.7□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Prl3b1P09586 222 aa13.7□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Anxa5P48036 319 aa13.7□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Afg1lQ3V384 480 aa13.7□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Ecm1Q61508 559 aa13.7□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Nemp1Q6ZQE4 437 aa13.7□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Il33Q8BVZ5 266 aa13.7□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Slc39a13Q8BZH0 361 aa13.7□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Wdr60Q8C761 999 aa13.7□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Ppp6r2Q8R3Q2 923 aa13.7□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Sntg2Q925E0 539 aa13.7□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Dpp3Q99KK7 738 aa13.7□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Chit1Q9D7Q1 464 aa13.7□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Msh5Q9QUM7 833 aa13.7□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Myo18aQ9JMH9 2050 aaKnown RBP13.7□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Fam81bA0A140LI28 432 aa13.7□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Cyp2t4E9PWV0 503 aa13.7□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Clk2O35491 499 aa13.7□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Ass1P16460 412 aa13.7□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Ticam2Q8BJQ4 232 aa13.7□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 SowahaQ8BLS7 548 aa13.7□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Cpt1bQ924X2 772 aa13.7□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Nup50Q9JIH2 466 aaKnown RBP13.7□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Smad9Q9JIW5 430 aa13.7□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Htra2Q9JIY5 458 aa13.7□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Atp11cQ9QZW0 1129 aa13.7□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Vmn2r55G3UWZ4 781 aa13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Vmn2r53L7N473 806 aa13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Lzts1P60853 599 aa13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Klrb1Q0ZUP1 214 aa13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Phactr1Q2M3X8 580 aa13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Agap2Q3UHD9 1186 aa13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Exoc3l4Q6DIA2 721 aa13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Klhdc10Q6PAR0 439 aa13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Pkn3Q8K045 878 aa13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Rxfp2Q91ZZ5 737 aa13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Nphs1Q9QZS7 1256 aa13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Kcnd2Q9Z0V2 630 aa13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Pgap3A2A559 320 aa13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Gm1141B9EJU1 475 aa13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Foxm1O08696 760 aa13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Mmp3P28862 477 aa13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Sar1aP36536 198 aa13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Foxp2P58463 714 aa13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Trcg1Q58Y74 825 aa13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Q5XFZ0 217 aa13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Rad9bQ6WBX7 403 aa13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Glra2Q7TNC8 452 aa13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Pde10aQ8CA95 790 aa13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Mtss1Q8R1S4 759 aa13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Rdh14Q9ERI6 334 aa13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Cdc42ep5Q9Z0X0 150 aa13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Card9A2AIV8 536 aa13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Msh2P43247 935 aaKnown RBP13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Rpl10aP53026 217 aaKnown RBP13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Tubgcp3P58854 905 aa13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Scarf2P59222 833 aa13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Il1rapl1P59823 695 aa13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Trim43cP86449 446 aa13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Fam47cQ14BE7 430 aa13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Samd11Q1RNF8 542 aa13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Q3UE31 404 aa13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Fndc3bQ6NWW9 1207 aaKnown RBP13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Tas2r102Q7M717 329 aa13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Fam185aQ7TPD2 378 aa13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Pdk1Q8BFP9 434 aaKnown RBP13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Lrrc4cQ8C031 640 aa13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Vmn1r64Q8R2B8 320 aa13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Rps6kl1Q8R2S1 544 aa13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 S100pbpQ9D5K4 396 aa13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Uts2Q9QZQ3 123 aa13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Slc8a3S4R2P9 928 aa13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Map1bP14873 2464 aaKnown RBP13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Tnfrsf18O35714 228 aa13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Serpinb2P12388 415 aa13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Zfy2P20662 777 aa13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Scp2P32020 547 aaKnown RBP13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Slc11a2P49282 568 aa13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 PctpP53808 214 aa13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Ccdc127Q3TC33 260 aa13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Zfp957Q3UT76 567 aa13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Phactr4Q501J7 694 aa13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Ptk6Q64434 451 aa13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Actr5Q80US4 605 aaKnown RBP13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Eif4bQ8BGD9 611 aaKnown RBP13.69□□□□□ -0.22
Pdgfra-205ENSMUST00000201711 Trub1Q8C0D0 338 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 24.4 ms