RNA–Protein interactions for RNA: YPR173C

VPS4, Transcript of AAA-ATPase involved in multivesicular body (MVB) protein sorting, yeastyeast

Gene VPS4, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS4YPR173C SPG1P50088 95 aa3.9□□□□□ -1.79
VPS4YPR173C YDR010CQ12426 110 aa3.9□□□□□ -1.79
VPS4YPR173C YDR034C-AP0C289 58 aa3.89□□□□□ -1.79
VPS4YPR173C YBR027CP38220 110 aa3.88□□□□□ -1.79
VPS4YPR173C YCR095W-AQ3E787 52 aa3.88□□□□□ -1.79
VPS4YPR173C MMS2P53152 137 aa3.86□□□□□ -1.79
VPS4YPR173C YDL012CQ12489 107 aa3.86□□□□□ -1.79
VPS4YPR173C YJR085CP47131 105 aaKnown RBP3.85□□□□□ -1.79
VPS4YPR173C YFR032C-BQ8TGU2 87 aa3.85□□□□□ -1.79
VPS4YPR173C YPR195CQ06594 109 aa3.81□□□□□ -1.8
VPS4YPR173C YJR128WP47162 119 aa3.79□□□□□ -1.8
VPS4YPR173C ATP17Q06405 101 aa3.79□□□□□ -1.8
VPS4YPR173C YHR073W-AP0C5N7 58 aa3.78□□□□□ -1.8
VPS4YPR173C YML100W-AQ8TGT0 57 aa3.78□□□□□ -1.8
VPS4YPR173C YGR146C-AQ8TGT9 53 aa3.78□□□□□ -1.8
VPS4YPR173C YLR255CO13574 117 aa3.76□□□□□ -1.81
VPS4YPR173C LCL2Q08045 131 aa3.75□□□□□ -1.81
VPS4YPR173C YIL156W-BQ2V2P4 73 aa3.75□□□□□ -1.81
VPS4YPR173C YNL122CP53921 115 aaPredicted RBP3.74□□□□□ -1.81
VPS4YPR173C LCL1Q02786 101 aa3.74□□□□□ -1.81
VPS4YPR173C YOR376W-AQ3E805 51 aa3.74□□□□□ -1.81
VPS4YPR173C YGL149WP53116 101 aa3.73□□□□□ -1.81
VPS4YPR173C YGL034CP53186 121 aa3.73□□□□□ -1.81
VPS4YPR173C YBR201C-AQ2V2Q3 67 aa3.73□□□□□ -1.81
VPS4YPR173C COX8P04039 78 aa3.72□□□□□ -1.81
VPS4YPR173C YBL008W-AQ3E821 79 aa3.72□□□□□ -1.81
VPS4YPR173C YOR316C-AQ3E806 69 aa3.71□□□□□ -1.81
VPS4YPR173C MRX7P53869 86 aa3.67□□□□□ -1.82
VPS4YPR173C OLI1P61829 76 aa3.65□□□□□ -1.83
VPS4YPR173C RPL37BP51402 88 aaKnown RBP3.63□□□□□ -1.83
VPS4YPR173C YBR016WP38216 128 aa3.62□□□□□ -1.83
VPS4YPR173C YFL067WP43537 175 aa3.62□□□□□ -1.83
VPS4YPR173C FYV12Q08559 129 aa3.62□□□□□ -1.83
VPS4YPR173C YER078W-AQ3E7A2 54 aa3.61□□□□□ -1.83
VPS4YPR173C COX7P10174 60 aa3.6□□□□□ -1.83
VPS4YPR173C DDR48P18899 430 aaKnown RBP3.57□□□□□ -1.84
VPS4YPR173C YJL144WP47009 104 aa3.57□□□□□ -1.84
VPS4YPR173C QCR10P37299 77 aa3.56□□□□□ -1.84
VPS4YPR173C YGL014C-AP0C5N1 53 aa3.55□□□□□ -1.84
VPS4YPR173C YEL014CP39999 101 aa3.51□□□□□ -1.85
VPS4YPR173C YCR108CQ3E819 63 aa3.44□□□□□ -1.86
VPS4YPR173C YOR394C-AQ8TGJ0 55 aa3.43□□□□□ -1.86
VPS4YPR173C DYN1P36022 4092 aa3.42□□□□□ -1.86
VPS4YPR173C SOM1Q05676 74 aa3.42□□□□□ -1.86
VPS4YPR173C YBL044WP38194 122 aa3.41□□□□□ -1.86
VPS4YPR173C RPL37AP49166 88 aaKnown RBP3.28□□□□□ -1.88
VPS4YPR173C YDR210WQ03482 75 aa3.27□□□□□ -1.89
VPS4YPR173C CMC4Q3E7A9 73 aa3.26□□□□□ -1.89
VPS4YPR173C MDN1Q12019 4910 aaKnown RBP3.24□□□□□ -1.89
VPS4YPR173C Q0017Q9ZZX8 53 aa3.22□□□□□ -1.89
VPS4YPR173C YML054C-AQ3E809 52 aa3.21□□□□□ -1.89
VPS4YPR173C YOR072W-BQ3E832 53 aa3.19□□□□□ -1.9
VPS4YPR173C YJL009WP47078 108 aa3.18□□□□□ -1.9
VPS4YPR173C YBR072C-AQ3E794 53 aa3.15□□□□□ -1.91
VPS4YPR173C YAL067W-AQ8TGK6 75 aa3.14□□□□□ -1.91
VPS4YPR173C YHR032W-AP0C5N6 59 aa3.12□□□□□ -1.91
VPS4YPR173C HHY1P39982 102 aa3.12□□□□□ -1.91
VPS4YPR173C YHR050W-AQ05451 56 aa2.55□□□□□ -2
VPS4YPR173C YOL164W-AQ3E7A5 60 aa2.54□□□□□ -2
VPS4YPR173C YHR086W-AQ3E746 53 aa2.47□□□□□ -2.01
VPS4YPR173C RPS29BP41058 56 aaKnown RBP2.4□□□□□ -2.03
VPS4YPR173C RPS29AP41057 56 aaKnown RBP2.28□□□□□ -2.04
VPS4YPR173C YLR157W-EP0CF00 54 aa2.19□□□□□ -2.06
Retrieved 63 of 5,963 RNA–protein pairs in 11.7 ms