RNA–Protein interactions for RNA: YPR054W

SMK1, Transcript of Middle sporulation-specific mitogen-activated protein kinase (MAPK), yeastyeast

Gene SMK1, Length 1,167 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMK1YPR054W YJL197C-AP0C5P0 93 aa4.53□□□□□ -1.68
SMK1YPR054W GIS2P53849 153 aaKnown RBP RIP-Chip data4.53□□□□□ -1.68not detected
SMK1YPR054W ATP17Q06405 101 aa4.53□□□□□ -1.68
SMK1YPR054W YLL066W-BQ8TGJ7 56 aa4.51□□□□□ -1.69
SMK1YPR054W YCR043CP25361 127 aa4.5□□□□□ -1.69
SMK1YPR054W YGL149WP53116 101 aa4.5□□□□□ -1.69
SMK1YPR054W SNA2P56508 79 aa4.5□□□□□ -1.69
SMK1YPR054W YGL041C-BQ3E750 60 aa4.49□□□□□ -1.69
SMK1YPR054W DYN1P36022 4092 aa4.49□□□□□ -1.69
SMK1YPR054W RTC6O14464 93 aa4.47□□□□□ -1.69
SMK1YPR054W YFR032C-BQ8TGU2 87 aa4.47□□□□□ -1.69
SMK1YPR054W DDR48P18899 430 aaKnown RBP4.46□□□□□ -1.7
SMK1YPR054W MRX7P53869 86 aa4.46□□□□□ -1.7
SMK1YPR054W YDL012CQ12489 107 aa4.46□□□□□ -1.7
SMK1YPR054W YNL122CP53921 115 aaPredicted RBP4.45□□□□□ -1.7
SMK1YPR054W LCL2Q08045 131 aa4.45□□□□□ -1.7
SMK1YPR054W YMR230W-AQ3E7B5 62 aa4.45□□□□□ -1.7
SMK1YPR054W QCR10P37299 77 aa4.39□□□□□ -1.71
SMK1YPR054W YOL097W-AQ3E7Y9 61 aa4.38□□□□□ -1.71
SMK1YPR054W YJR128WP47162 119 aa4.37□□□□□ -1.71
SMK1YPR054W YLR255CO13574 117 aa4.33□□□□□ -1.72
SMK1YPR054W YBR201C-AQ2V2Q3 67 aa4.33□□□□□ -1.72
SMK1YPR054W YGR146C-AQ8TGT9 53 aa4.33□□□□□ -1.72
SMK1YPR054W YBL008W-AQ3E821 79 aa4.32□□□□□ -1.72
SMK1YPR054W YGL014C-AP0C5N1 53 aa4.31□□□□□ -1.72
SMK1YPR054W SOM1Q05676 74 aa4.3□□□□□ -1.72
SMK1YPR054W YHR073W-AP0C5N7 58 aa4.29□□□□□ -1.72
SMK1YPR054W MDN1Q12019 4910 aaKnown RBP4.27□□□□□ -1.73
SMK1YPR054W COX8P04039 78 aa4.26□□□□□ -1.73
SMK1YPR054W YJR085CP47131 105 aaKnown RBP4.26□□□□□ -1.73
SMK1YPR054W FYV12Q08559 129 aa4.23□□□□□ -1.73
SMK1YPR054W YOR316C-AQ3E806 69 aa4.23□□□□□ -1.73
SMK1YPR054W YDR034C-AP0C289 58 aa4.21□□□□□ -1.74
SMK1YPR054W RPL37BP51402 88 aaKnown RBP4.19□□□□□ -1.74
SMK1YPR054W OLI1P61829 76 aa4.18□□□□□ -1.74
SMK1YPR054W YBR016WP38216 128 aa4.14□□□□□ -1.75
SMK1YPR054W YEL014CP39999 101 aa4.14□□□□□ -1.75
SMK1YPR054W YPR195CQ06594 109 aa4.1□□□□□ -1.75
SMK1YPR054W YJL144WP47009 104 aa4.07□□□□□ -1.76
SMK1YPR054W YDR210WQ03482 75 aa4.07□□□□□ -1.76
SMK1YPR054W YOR394C-AQ8TGJ0 55 aa4.07□□□□□ -1.76
SMK1YPR054W YCR108CQ3E819 63 aa4.05□□□□□ -1.76
SMK1YPR054W LCL1Q02786 101 aa4.02□□□□□ -1.77
SMK1YPR054W YBL044WP38194 122 aa4.01□□□□□ -1.77
SMK1YPR054W COX7P10174 60 aa3.95□□□□□ -1.78
SMK1YPR054W YFL067WP43537 175 aa3.85□□□□□ -1.79
SMK1YPR054W CMC4Q3E7A9 73 aa3.84□□□□□ -1.79
SMK1YPR054W YER078W-AQ3E7A2 54 aa3.82□□□□□ -1.8
SMK1YPR054W RPL37AP49166 88 aaKnown RBP3.79□□□□□ -1.8
SMK1YPR054W YBR072C-AQ3E794 53 aa3.69□□□□□ -1.82
SMK1YPR054W YOR072W-BQ3E832 53 aa3.68□□□□□ -1.82
SMK1YPR054W HHY1P39982 102 aa3.66□□□□□ -1.82
SMK1YPR054W YJL009WP47078 108 aa3.57□□□□□ -1.84
SMK1YPR054W YML054C-AQ3E809 52 aa3.54□□□□□ -1.84
SMK1YPR054W YHR032W-AP0C5N6 59 aa3.53□□□□□ -1.84
SMK1YPR054W Q0017Q9ZZX8 53 aa3.49□□□□□ -1.85
SMK1YPR054W YAL067W-AQ8TGK6 75 aa3.21□□□□□ -1.9
SMK1YPR054W YOL164W-AQ3E7A5 60 aa3.11□□□□□ -1.91
SMK1YPR054W YHR050W-AQ05451 56 aa2.9□□□□□ -1.95
SMK1YPR054W RPS29AP41057 56 aaKnown RBP2.65□□□□□ -1.99
SMK1YPR054W YHR086W-AQ3E746 53 aa2.6□□□□□ -1.99
SMK1YPR054W YLR157W-EP0CF00 54 aa2.56□□□□□ -2
SMK1YPR054W RPS29BP41058 56 aaKnown RBP2.46□□□□□ -2.02
Retrieved 63 of 5,963 RNA–protein pairs in 109.4 ms