RNA–Protein interactions for RNA: YPL030W

TRM44, Transcript of tRNA(Ser) Um(44) 2'-O-methyltransferase, yeastyeast

Gene TRM44, Length 1,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM44YPL030W RPL39P04650 51 aa2.85□□□□□ -1.95
TRM44YPL030W OLI1P61829 76 aa2.85□□□□□ -1.95
TRM44YPL030W YGR146C-AQ8TGT9 53 aa2.84□□□□□ -1.96
TRM44YPL030W YJL144WP47009 104 aa2.83□□□□□ -1.96
TRM44YPL030W RDS3Q06835 107 aaPredicted RBP2.82□□□□□ -1.96
TRM44YPL030W URA2P07259 2214 aaKnown RBP2.8□□□□□ -1.96
TRM44YPL030W YJL009WP47078 108 aa2.79□□□□□ -1.96
TRM44YPL030W YJR128WP47162 119 aa2.79□□□□□ -1.96
TRM44YPL030W YIL046W-AQ3E7Z4 54 aa2.79□□□□□ -1.96
TRM44YPL030W RPL37BP51402 88 aaKnown RBP2.77□□□□□ -1.97
TRM44YPL030W TAR1Q8TGM6 124 aa2.76□□□□□ -1.97
TRM44YPL030W YOR316C-AQ3E806 69 aa2.74□□□□□ -1.97
TRM44YPL030W YCR108CQ3E819 63 aa2.73□□□□□ -1.97
TRM44YPL030W GIS2P53849 153 aaKnown RBP RIP-Chip data2.73□□□□□ -1.97not detected
TRM44YPL030W LCL1Q02786 101 aa2.73□□□□□ -1.97
TRM44YPL030W YHR073W-AP0C5N7 58 aa2.72□□□□□ -1.97
TRM44YPL030W YBL044WP38194 122 aa2.72□□□□□ -1.97
TRM44YPL030W RPL43AP0CX25 92 aaKnown RBP2.71□□□□□ -1.98
TRM44YPL030W RPL43BP0CX26 92 aa2.71□□□□□ -1.98
TRM44YPL030W YDR524C-BQ3E6R4 66 aa2.71□□□□□ -1.98
TRM44YPL030W YBR072C-AQ3E794 53 aa2.68□□□□□ -1.98
TRM44YPL030W YBR016WP38216 128 aa2.65□□□□□ -1.98
TRM44YPL030W YMR230W-AQ3E7B5 62 aa2.63□□□□□ -1.99
TRM44YPL030W HFA1P32874 2273 aa2.6□□□□□ -1.99
TRM44YPL030W HHY1P39982 102 aa2.58□□□□□ -2
TRM44YPL030W YGL260WP53056 76 aa2.55□□□□□ -2
TRM44YPL030W YLL066W-BQ8TGJ7 56 aa2.55□□□□□ -2
TRM44YPL030W RPL37AP49166 88 aaKnown RBP2.53□□□□□ -2
TRM44YPL030W YOR072W-BQ3E832 53 aa2.53□□□□□ -2
TRM44YPL030W YDR034C-AP0C289 58 aa2.52□□□□□ -2.01
TRM44YPL030W YHR212W-AP0CX91 67 aa2.49□□□□□ -2.01
TRM44YPL030W IRA2P19158 3079 aa2.46□□□□□ -2.01
TRM44YPL030W VPS13Q07878 3144 aa2.37□□□□□ -2.03
TRM44YPL030W MEC1P38111 2368 aa2.36□□□□□ -2.03
TRM44YPL030W YHR086W-AQ3E746 53 aa2.32□□□□□ -2.04
TRM44YPL030W TOM1Q03280 3268 aa2.32□□□□□ -2.04
TRM44YPL030W TAO3P40468 2376 aa2.31□□□□□ -2.04
TRM44YPL030W GCN1P33892 2672 aaKnown RBP2.28□□□□□ -2.04
TRM44YPL030W PRP8P33334 2413 aaKnown RBP2.26□□□□□ -2.05
TRM44YPL030W YML054C-AQ3E809 52 aa2.26□□□□□ -2.05
TRM44YPL030W Q0297Q9ZZV8 51 aa2.26□□□□□ -2.05
TRM44YPL030W CSF1Q12150 2958 aa2.25□□□□□ -2.05
TRM44YPL030W YOL164W-AQ3E7A5 60 aa2.24□□□□□ -2.05
TRM44YPL030W UTP20P35194 2493 aaKnown RBP2.17□□□□□ -2.06
TRM44YPL030W IRA1P18963 3092 aa2.14□□□□□ -2.07
TRM44YPL030W NUM1Q00402 2748 aa2.13□□□□□ -2.07
TRM44YPL030W TRA1P38811 3744 aa2.13□□□□□ -2.07
TRM44YPL030W Q0017Q9ZZX8 53 aa2.11□□□□□ -2.07
TRM44YPL030W YLR157W-EP0CF00 54 aa2.07□□□□□ -2.08
TRM44YPL030W FMP27Q06179 2628 aa2.05□□□□□ -2.08
TRM44YPL030W YDR034W-BQ6Q5X2 51 aa1.98□□□□□ -2.09
TRM44YPL030W YHR050W-AQ05451 56 aa1.97□□□□□ -2.09
TRM44YPL030W RPS29AP41057 56 aaKnown RBP1.96□□□□□ -2.1
TRM44YPL030W YPR117WQ06116 2489 aa1.96□□□□□ -2.1
TRM44YPL030W TOR2P32600 2474 aaKnown RBP1.93□□□□□ -2.1
TRM44YPL030W TEL1P38110 2787 aa1.9□□□□□ -2.11
TRM44YPL030W TOR1P35169 2470 aa1.88□□□□□ -2.11
TRM44YPL030W RPS29BP41058 56 aaKnown RBP1.86□□□□□ -2.11
TRM44YPL030W YBR056W-AI2HB52 66 aa1.86□□□□□ -2.11
TRM44YPL030W DYN1P36022 4092 aa1.79□□□□□ -2.12
TRM44YPL030W CUP1-1P0CX80 61 aa1.7□□□□□ -2.14
TRM44YPL030W CUP1-2P0CX81 61 aa1.7□□□□□ -2.14
TRM44YPL030W MDN1Q12019 4910 aaKnown RBP1.41□□□□□ -2.18
Retrieved 63 of 5,963 RNA–protein pairs in 10.6 ms