RNA–Protein interactions for RNA: YOR322C

LDB19, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene LDB19, Length 2,457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB19YOR322C YIL086CP40503 102 aa3.72□□□□□ -1.81
LDB19YOR322C NCE101Q02820 53 aa3.72□□□□□ -1.81
LDB19YOR322C YHR007C-AQ07074 71 aa3.72□□□□□ -1.81
LDB19YOR322C YAR064WP39563 99 aa3.71□□□□□ -1.82
LDB19YOR322C YOR011W-AQ3E807 68 aa3.7□□□□□ -1.82
LDB19YOR322C UTP20P35194 2493 aaKnown RBP3.67□□□□□ -1.82
LDB19YOR322C COX7P10174 60 aa3.66□□□□□ -1.82
LDB19YOR322C YOR394C-AQ8TGJ0 55 aa3.66□□□□□ -1.82
LDB19YOR322C GIS2P53849 153 aaKnown RBP RIP-Chip data3.65□□□□□ -1.83not detected
LDB19YOR322C FMP27Q06179 2628 aa3.64□□□□□ -1.83
LDB19YOR322C RPS27AP35997 82 aaKnown RBP3.63□□□□□ -1.83
LDB19YOR322C RPS27BP38711 82 aa3.63□□□□□ -1.83
LDB19YOR322C YJL127C-BQ3E828 52 aa3.62□□□□□ -1.83
LDB19YOR322C YNL162W-AQ3E7A8 72 aa3.62□□□□□ -1.83
LDB19YOR322C YCR108CQ3E819 63 aa3.61□□□□□ -1.83
LDB19YOR322C RPC10P40422 70 aa3.6□□□□□ -1.83
LDB19YOR322C YBR230W-AQ3E762 66 aa3.59□□□□□ -1.83
LDB19YOR322C VPS13Q07878 3144 aa3.59□□□□□ -1.84
LDB19YOR322C YBL044WP38194 122 aa3.59□□□□□ -1.84
LDB19YOR322C RDS3Q06835 107 aaPredicted RBP3.59□□□□□ -1.84
LDB19YOR322C RPL29P05747 59 aaPredicted RBP3.57□□□□□ -1.84
LDB19YOR322C DDR2P89113 61 aa3.54□□□□□ -1.84
LDB19YOR322C PMP3P87284 55 aa3.53□□□□□ -1.84
LDB19YOR322C HFA1P32874 2273 aa3.52□□□□□ -1.85
LDB19YOR322C OLI1P61829 76 aa3.51□□□□□ -1.85
LDB19YOR322C YLR307C-AQ3E825 87 aa3.5□□□□□ -1.85
LDB19YOR322C IRA2P19158 3079 aa3.48□□□□□ -1.85
LDB19YOR322C YGR146C-AQ8TGT9 53 aa3.47□□□□□ -1.85
LDB19YOR322C YMR105W-AQ8TGS8 64 aa3.47□□□□□ -1.85
LDB19YOR322C YMR230W-AQ3E7B5 62 aa3.46□□□□□ -1.86
LDB19YOR322C YJL009WP47078 108 aa3.45□□□□□ -1.86
LDB19YOR322C YNL146C-AQ3E7Z1 64 aa3.44□□□□□ -1.86
LDB19YOR322C RPL39P04650 51 aa3.44□□□□□ -1.86
LDB19YOR322C RPL37BP51402 88 aaKnown RBP3.41□□□□□ -1.86
LDB19YOR322C YBR016WP38216 128 aa3.36□□□□□ -1.87
LDB19YOR322C MEC1P38111 2368 aa3.34□□□□□ -1.87
LDB19YOR322C YIL046W-AQ3E7Z4 54 aa3.33□□□□□ -1.88
LDB19YOR322C IRA1P18963 3092 aa3.32□□□□□ -1.88
LDB19YOR322C MDN1Q12019 4910 aaKnown RBP3.31□□□□□ -1.88
LDB19YOR322C HHY1P39982 102 aa3.29□□□□□ -1.88
LDB19YOR322C YHR212W-AP0CX91 67 aa3.28□□□□□ -1.88
LDB19YOR322C HOR7Q05827 59 aa3.28□□□□□ -1.88
LDB19YOR322C YOR316C-AQ3E806 69 aa3.28□□□□□ -1.88
LDB19YOR322C DYN1P36022 4092 aa3.26□□□□□ -1.89
LDB19YOR322C YBR056W-AI2HB52 66 aa3.24□□□□□ -1.89
LDB19YOR322C YBR072C-AQ3E794 53 aa3.24□□□□□ -1.89
LDB19YOR322C YHR086W-AQ3E746 53 aa3.22□□□□□ -1.89
LDB19YOR322C YGL260WP53056 76 aa3.19□□□□□ -1.9
LDB19YOR322C YHR073W-AP0C5N7 58 aa3.14□□□□□ -1.91
LDB19YOR322C CSF1Q12150 2958 aa3.13□□□□□ -1.91
LDB19YOR322C YOL164W-AQ3E7A5 60 aa3.08□□□□□ -1.92
LDB19YOR322C RPL37AP49166 88 aaKnown RBP3.07□□□□□ -1.92
LDB19YOR322C TRA1P38811 3744 aa3.06□□□□□ -1.92
LDB19YOR322C YDR034C-AP0C289 58 aa3.05□□□□□ -1.92
LDB19YOR322C YOR072W-BQ3E832 53 aa3.03□□□□□ -1.92
LDB19YOR322C YLL066W-BQ8TGJ7 56 aa2.98□□□□□ -1.93
LDB19YOR322C YLR157W-EP0CF00 54 aa2.81□□□□□ -1.96
LDB19YOR322C Q0297Q9ZZV8 51 aa2.68□□□□□ -1.98
LDB19YOR322C YML054C-AQ3E809 52 aa2.48□□□□□ -2.01
LDB19YOR322C Q0017Q9ZZX8 53 aa2.39□□□□□ -2.03
LDB19YOR322C YHR050W-AQ05451 56 aa2.27□□□□□ -2.05
LDB19YOR322C RPS29BP41058 56 aaKnown RBP2.22□□□□□ -2.05
LDB19YOR322C RPS29AP41057 56 aaKnown RBP2.2□□□□□ -2.06
Retrieved 63 of 5,963 RNA–protein pairs in 5.1 ms