RNA–Protein interactions for RNA: YOR247W

SRL1, Transcript of Mannoprotein that exhibits a tight association with the cell wall, yeastyeast

Gene SRL1, Length 633 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRL1YOR247W SSS1P35179 80 aa0.37□□□□□ -2.35
SRL1YOR247W YFL041W-AQ3E817 63 aa0.37□□□□□ -2.35
SRL1YOR247W CSF1Q12150 2958 aa0.37□□□□□ -2.35
SRL1YOR247W TRA1P38811 3744 aa0.36□□□□□ -2.35
SRL1YOR247W RPS27AP35997 82 aaKnown RBP0.35□□□□□ -2.35
SRL1YOR247W SPI1P40092 148 aa0.35□□□□□ -2.35
SRL1YOR247W YBR200W-AQ3E755 54 aa0.35□□□□□ -2.35
SRL1YOR247W Q0297Q9ZZV8 51 aa0.35□□□□□ -2.35
SRL1YOR247W TOR2P32600 2474 aaKnown RBP0.35□□□□□ -2.35
SRL1YOR247W YBL039W-BP0C268 59 aa0.34□□□□□ -2.36
SRL1YOR247W YDR246W-AQ3E763 66 aa0.34□□□□□ -2.36
SRL1YOR247W FMP27Q06179 2628 aa0.33□□□□□ -2.36
SRL1YOR247W OLI1P61829 76 aa0.31□□□□□ -2.36
SRL1YOR247W YOR394C-AQ8TGJ0 55 aa0.31□□□□□ -2.36
SRL1YOR247W RPS30AP0CX33 63 aaKnown RBP0.3□□□□□ -2.36
SRL1YOR247W RPS30BP0CX34 63 aaKnown RBP0.3□□□□□ -2.36
SRL1YOR247W YSY6P38374 65 aa0.3□□□□□ -2.36
SRL1YOR247W YOR011W-AQ3E807 68 aa0.3□□□□□ -2.36
SRL1YOR247W YFR010W-AP0C5N0 62 aa0.29□□□□□ -2.36
SRL1YOR247W RPS27BP38711 82 aa0.29□□□□□ -2.36
SRL1YOR247W HUB1Q6Q546 73 aa0.29□□□□□ -2.36
SRL1YOR247W YOL131WQ08270 108 aa0.28□□□□□ -2.36
SRL1YOR247W SIP18P50263 79 aa0.27□□□□□ -2.37
SRL1YOR247W YIL102C-AQ2V2P5 75 aa0.27□□□□□ -2.37
SRL1YOR247W UTP20P35194 2493 aaKnown RBP0.27□□□□□ -2.37
SRL1YOR247W YDR182W-AQ3E796 67 aa0.26□□□□□ -2.37
SRL1YOR247W NCE101Q02820 53 aa0.25□□□□□ -2.37
SRL1YOR247W RPS29AP41057 56 aaKnown RBP0.24□□□□□ -2.37
SRL1YOR247W HOR7Q05827 59 aa0.24□□□□□ -2.37
SRL1YOR247W MEC1P38111 2368 aa0.23□□□□□ -2.37
SRL1YOR247W YOL166W-AQ8TGJ1 51 aa0.23□□□□□ -2.37
SRL1YOR247W YOR008C-AQ3E7B9 74 aa0.22□□□□□ -2.37
SRL1YOR247W YMR001C-AQ8TGS9 76 aa0.22□□□□□ -2.37
SRL1YOR247W RPL39P04650 51 aa0.21□□□□□ -2.38
SRL1YOR247W YLR157W-DP0CE99 70 aa0.21□□□□□ -2.38
SRL1YOR247W TOS6P48560 102 aa0.2□□□□□ -2.38
SRL1YOR247W VMA9Q3E7B6 73 aa0.2□□□□□ -2.38
SRL1YOR247W YMR105W-AQ8TGS8 64 aa0.2□□□□□ -2.38
SRL1YOR247W YPR010C-AA5Z2X5 72 aa0.19□□□□□ -2.38
SRL1YOR247W YLL066W-BQ8TGJ7 56 aa0.19□□□□□ -2.38
SRL1YOR247W YDR034C-AP0C289 58 aa0.18□□□□□ -2.38
SRL1YOR247W Q0017Q9ZZX8 53 aa0.17□□□□□ -2.38
SRL1YOR247W TOM7P53507 60 aa0.16□□□□□ -2.38
SRL1YOR247W YOR192C-CQ3E736 78 aa0.16□□□□□ -2.38
SRL1YOR247W COX9P07255 59 aa0.15□□□□□ -2.39
SRL1YOR247W YBR230W-AQ3E762 66 aa0.15□□□□□ -2.39
SRL1YOR247W YGL258W-AQ3E740 77 aa0.14□□□□□ -2.39
SRL1YOR247W YGR146C-AQ8TGT9 53 aa0.14□□□□□ -2.39
SRL1YOR247W SMX2P40204 77 aaKnown RBP0.13□□□□□ -2.39
SRL1YOR247W PMP3P87284 55 aa0.12□□□□□ -2.39
SRL1YOR247W YLR342W-AQ3E810 57 aa0.11□□□□□ -2.39
SRL1YOR247W YKL023C-AQ2V2P3 75 aa0.1□□□□□ -2.39
SRL1YOR247W YML054C-AQ3E809 52 aa0.1□□□□□ -2.39
SRL1YOR247W YLL006W-AQ3E814 58 aa0.1□□□□□ -2.39
SRL1YOR247W RPL29P05747 59 aaPredicted RBP0.09□□□□□ -2.4
SRL1YOR247W YHR073W-AP0C5N7 58 aa0.09□□□□□ -2.4
SRL1YOR247W DDR2P89113 61 aa0.08□□□□□ -2.4
SRL1YOR247W COA2Q3E823 68 aa0.06□□□□□ -2.4
SRL1YOR247W YJL127C-BQ3E828 52 aa0.05□□□□□ -2.4
SRL1YOR247W YJL133C-AQ3E7A3 74 aa0.04□□□□□ -2.4
SRL1YOR247W YOR316C-AQ3E806 69 aa0.04□□□□□ -2.4
SRL1YOR247W YHR050W-AQ05451 56 aa0.02□□□□□ -2.41
SRL1YOR247W YOR072W-BQ3E832 53 aa0.01□□□□□ -2.41
Retrieved 63 of 5,963 RNA–protein pairs in 9.8 ms