RNA–Protein interactions for RNA: YOR216C

RUD3, Transcript of Golgi matrix protein, yeast

Gene RUD3, Length 1,455 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RUD3	YOR216C	RPS30A	P0CX33	63 aa	Known RBP	0.89	□□□□□ -2.27
RUD3	YOR216C	RPS30B	P0CX34	63 aa	Known RBP	0.89	□□□□□ -2.27
RUD3	YOR216C	BUD3	P25558	1636 aa		0.88	□□□□□ -2.27
RUD3	YOR216C	YLR146W-A	Q2V2P1	62 aa		0.88	□□□□□ -2.27
RUD3	YOR216C	RPL37B	P51402	88 aa	Known RBP	0.86	□□□□□ -2.27
RUD3	YOR216C	YOR011W-A	Q3E807	68 aa		0.86	□□□□□ -2.27
RUD3	YOR216C	YOL166W-A	Q8TGJ1	51 aa		0.86	□□□□□ -2.27
RUD3	YOR216C	NUP170	P38181	1502 aa		0.86	□□□□□ -2.27
RUD3	YOR216C	YBL039W-B	P0C268	59 aa		0.86	□□□□□ -2.27
RUD3	YOR216C	OLI1	P61829	76 aa		0.86	□□□□□ -2.27
RUD3	YOR216C	MLP2	P40457	1679 aa		0.85	□□□□□ -2.27
RUD3	YOR216C	YBR200W-A	Q3E755	54 aa		0.84	□□□□□ -2.28
RUD3	YOR216C	YOL164W-A	Q3E7A5	60 aa		0.84	□□□□□ -2.28
RUD3	YOR216C	YMR001C-A	Q8TGS9	76 aa		0.84	□□□□□ -2.28
RUD3	YOR216C	STU1	P38198	1513 aa		0.83	□□□□□ -2.28
RUD3	YOR216C	YOR394C-A	Q8TGJ0	55 aa		0.83	□□□□□ -2.28
RUD3	YOR216C	YLR157W-D	P0CE99	70 aa		0.82	□□□□□ -2.28
RUD3	YOR216C	YGR025W	P53216	100 aa		0.82	□□□□□ -2.28
RUD3	YOR216C	RPS27A	P35997	82 aa	Known RBP	0.81	□□□□□ -2.28
RUD3	YOR216C	YFR009W-A	P0C5M9	85 aa		0.8	□□□□□ -2.28
RUD3	YOR216C	YBR016W	P38216	128 aa		0.8	□□□□□ -2.28
RUD3	YOR216C	RPS29B	P41058	56 aa	Known RBP	0.79	□□□□□ -2.28
RUD3	YOR216C	YBR230W-A	Q3E762	66 aa		0.79	□□□□□ -2.28
RUD3	YOR216C	YBL044W	P38194	122 aa		0.77	□□□□□ -2.29
RUD3	YOR216C	YOR192C-C	Q3E736	78 aa		0.76	□□□□□ -2.29
RUD3	YOR216C	FIG2	P25653	1609 aa		0.75	□□□□□ -2.29
RUD3	YOR216C	SIP18	P50263	79 aa		0.73	□□□□□ -2.29
RUD3	YOR216C	RPS27B	P38711	82 aa		0.72	□□□□□ -2.29
RUD3	YOR216C	YOR008C-A	Q3E7B9	74 aa		0.72	□□□□□ -2.29
RUD3	YOR216C	YPR010C-A	A5Z2X5	72 aa		0.71	□□□□□ -2.3
RUD3	YOR216C	TOS6	P48560	102 aa		0.68	□□□□□ -2.3
RUD3	YOR216C	YGR146C-A	Q8TGT9	53 aa		0.68	□□□□□ -2.3
RUD3	YOR216C	YCR108C	Q3E819	63 aa		0.66	□□□□□ -2.3
RUD3	YOR216C	COA2	Q3E823	68 aa		0.66	□□□□□ -2.3
RUD3	YOR216C	YDR524C-B	Q3E6R4	66 aa		0.65	□□□□□ -2.31
RUD3	YOR216C	YBR056W-A	I2HB52	66 aa		0.64	□□□□□ -2.31
RUD3	YOR216C	SMX2	P40204	77 aa	Known RBP	0.61	□□□□□ -2.31
RUD3	YOR216C	YOR072W-B	Q3E832	53 aa		0.6	□□□□□ -2.31
RUD3	YOR216C	RPS29A	P41057	56 aa	Known RBP	0.59	□□□□□ -2.32
RUD3	YOR216C	COX9	P07255	59 aa		0.58	□□□□□ -2.32
RUD3	YOR216C	YGL258W-A	Q3E740	77 aa		0.56	□□□□□ -2.32
RUD3	YOR216C	YOR316C-A	Q3E806	69 aa		0.55	□□□□□ -2.32
RUD3	YOR216C	YLR342W-A	Q3E810	57 aa		0.55	□□□□□ -2.32
RUD3	YOR216C	YLL006W-A	Q3E814	58 aa		0.55	□□□□□ -2.32
RUD3	YOR216C	YJL133C-A	Q3E7A3	74 aa		0.54	□□□□□ -2.32
RUD3	YOR216C	FLO1	P32768	1537 aa		0.54	□□□□□ -2.32
RUD3	YOR216C	DDR2	P89113	61 aa		0.54	□□□□□ -2.32
RUD3	YOR216C	YDR034C-A	P0C289	58 aa		0.45	□□□□□ -2.34
RUD3	YOR216C	RPL29	P05747	59 aa	Predicted RBP	0.44	□□□□□ -2.34
RUD3	YOR216C	YHR073W-A	P0C5N7	58 aa		0.42	□□□□□ -2.34
RUD3	YOR216C	YHR050W-A	Q05451	56 aa		0.42	□□□□□ -2.34
RUD3	YOR216C	YJL127C-B	Q3E828	52 aa		0.42	□□□□□ -2.34
RUD3	YOR216C	YIL046W-A	Q3E7Z4	54 aa		0.39	□□□□□ -2.35
RUD3	YOR216C	TOM7	P53507	60 aa		0.37	□□□□□ -2.35
RUD3	YOR216C	YML054C-A	Q3E809	52 aa		0.32	□□□□□ -2.36
RUD3	YOR216C	Q0017	Q9ZZX8	53 aa		0.32	□□□□□ -2.36
RUD3	YOR216C	PMP3	P87284	55 aa		0.31	□□□□□ -2.36
RUD3	YOR216C	HOR7	Q05827	59 aa		0.3	□□□□□ -2.36
RUD3	YOR216C	Q0297	Q9ZZV8	51 aa		0.17	□□□□□ -2.38
RUD3	YOR216C	NCE101	Q02820	53 aa		0.16	□□□□□ -2.38
RUD3	YOR216C	YMR105W-A	Q8TGS8	64 aa		0.12	□□□□□ -2.39
RUD3	YOR216C	YLL066W-B	Q8TGJ7	56 aa		0.04	□□□□□ -2.4
RUD3	YOR216C	RPL39	P04650	51 aa		-0.12	□□□□□ -2.43

Retrieved 63 of 5,963 RNA–protein pairs in 8.9 ms