RNA–Protein interactions for RNA: YOR048C

RAT1, Transcript of Nuclear 5' to 3' single-stranded RNA exonuclease, yeastyeast

Gene RAT1, Length 3,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RAT1YOR048C YIL156W-BQ2V2P4 73 aa3.36□□□□□ -1.87
RAT1YOR048C YMR001C-AQ8TGS9 76 aa3.36□□□□□ -1.87
RAT1YOR048C RPS28BP0C0X0 67 aaKnown RBP3.36□□□□□ -1.87
RAT1YOR048C YNL122CP53921 115 aaPredicted RBP3.36□□□□□ -1.87
RAT1YOR048C SDH6Q3E785 79 aa3.36□□□□□ -1.87
RAT1YOR048C RPS28AQ3E7X9 67 aaPredicted RBP3.36□□□□□ -1.87
RAT1YOR048C YGL149WP53116 101 aa3.35□□□□□ -1.87
RAT1YOR048C YJL144WP47009 104 aa3.33□□□□□ -1.88
RAT1YOR048C YLR412C-AQ3E742 68 aa3.33□□□□□ -1.88
RAT1YOR048C YCR095W-AQ3E787 52 aa3.33□□□□□ -1.88
RAT1YOR048C YBR182C-AQ8TGU6 64 aa3.33□□□□□ -1.88
RAT1YOR048C YFR032C-BQ8TGU2 87 aa3.32□□□□□ -1.88
RAT1YOR048C YGR164WP53291 111 aa3.32□□□□□ -1.88
RAT1YOR048C HUB1Q6Q546 73 aa3.3□□□□□ -1.88
RAT1YOR048C YOL097W-AQ3E7Y9 61 aa3.29□□□□□ -1.88
RAT1YOR048C YJR085CP47131 105 aaKnown RBP3.28□□□□□ -1.88
RAT1YOR048C YNL277W-AQ3E7Z0 62 aa3.28□□□□□ -1.88
RAT1YOR048C SPG1P50088 95 aa3.27□□□□□ -1.89
RAT1YOR048C YOR316C-AQ3E806 69 aa3.27□□□□□ -1.89
RAT1YOR048C YKL065W-AQ2V2P2 73 aa3.27□□□□□ -1.89
RAT1YOR048C LCL1Q02786 101 aa3.24□□□□□ -1.89
RAT1YOR048C YGR146C-AQ8TGT9 53 aa3.22□□□□□ -1.89
RAT1YOR048C YBR201C-AQ2V2Q3 67 aa3.22□□□□□ -1.89
RAT1YOR048C FYV12Q08559 129 aa3.22□□□□□ -1.89
RAT1YOR048C YLR255CO13574 117 aa3.21□□□□□ -1.9
RAT1YOR048C COX8P04039 78 aa3.2□□□□□ -1.9
RAT1YOR048C YFL067WP43537 175 aa3.17□□□□□ -1.9
RAT1YOR048C YBL008W-AQ3E821 79 aa3.16□□□□□ -1.9
RAT1YOR048C YHR073W-AP0C5N7 58 aa3.16□□□□□ -1.9
RAT1YOR048C YML100W-AQ8TGT0 57 aa3.14□□□□□ -1.91
RAT1YOR048C MDN1Q12019 4910 aaKnown RBP3.14□□□□□ -1.91
RAT1YOR048C ATP17Q06405 101 aa3.14□□□□□ -1.91
RAT1YOR048C YBR016WP38216 128 aa3.13□□□□□ -1.91
RAT1YOR048C OLI1P61829 76 aa3.13□□□□□ -1.91
RAT1YOR048C YEL014CP39999 101 aa3.08□□□□□ -1.92
RAT1YOR048C YCR108CQ3E819 63 aa3.08□□□□□ -1.92
RAT1YOR048C MRX7P53869 86 aa3.06□□□□□ -1.92
RAT1YOR048C RPL37BP51402 88 aaKnown RBP3.06□□□□□ -1.92
RAT1YOR048C YBL044WP38194 122 aa3.04□□□□□ -1.92
RAT1YOR048C COX7P10174 60 aa3.04□□□□□ -1.92
RAT1YOR048C YGL014C-AP0C5N1 53 aa3.02□□□□□ -1.93
RAT1YOR048C QCR10P37299 77 aa2.99□□□□□ -1.93
RAT1YOR048C YOR394C-AQ8TGJ0 55 aa2.92□□□□□ -1.94
RAT1YOR048C YER175W-AQ8TGU4 54 aa2.9□□□□□ -1.95
RAT1YOR048C SOM1Q05676 74 aa2.88□□□□□ -1.95
RAT1YOR048C YJL009WP47078 108 aa2.83□□□□□ -1.96
RAT1YOR048C RPL37AP49166 88 aaKnown RBP2.76□□□□□ -1.97
RAT1YOR048C YDR210WQ03482 75 aa2.76□□□□□ -1.97
RAT1YOR048C CMC4Q3E7A9 73 aa2.76□□□□□ -1.97
RAT1YOR048C HHY1P39982 102 aa2.71□□□□□ -1.98
RAT1YOR048C YOR072W-BQ3E832 53 aa2.63□□□□□ -1.99
RAT1YOR048C Q0017Q9ZZX8 53 aa2.63□□□□□ -1.99
RAT1YOR048C YML054C-AQ3E809 52 aa2.61□□□□□ -1.99
RAT1YOR048C YBR072C-AQ3E794 53 aa2.51□□□□□ -2.01
RAT1YOR048C YER078W-AQ3E7A2 54 aa2.5□□□□□ -2.01
RAT1YOR048C YAL067W-AQ8TGK6 75 aa2.42□□□□□ -2.02
RAT1YOR048C YHR032W-AP0C5N6 59 aa2.34□□□□□ -2.03
RAT1YOR048C YOL164W-AQ3E7A5 60 aa2.25□□□□□ -2.05
RAT1YOR048C YHR050W-AQ05451 56 aa2.06□□□□□ -2.08
RAT1YOR048C RPS29BP41058 56 aaKnown RBP1.97□□□□□ -2.09
RAT1YOR048C YLR157W-EP0CF00 54 aa1.88□□□□□ -2.11
RAT1YOR048C YHR086W-AQ3E746 53 aa1.88□□□□□ -2.11
RAT1YOR048C RPS29AP41057 56 aaKnown RBP1.83□□□□□ -2.12
Retrieved 63 of 5,963 RNA–protein pairs in 11.1 ms