RNA–Protein interactions for RNA: YOL090W

MSH2, Transcript of Protein that binds to DNA mismatches, yeastyeast

Gene MSH2, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH2YOL090W EDC1P53080 175 aaPredicted RBP1.5□□□□□ -2.17
MSH2YOL090W YHR213W-BQ8TGK1 99 aa1.5□□□□□ -2.17
MSH2YOL090W COX7P10174 60 aa1.49□□□□□ -2.17
MSH2YOL090W YMR105W-AQ8TGS8 64 aa1.49□□□□□ -2.17
MSH2YOL090W ATP17Q06405 101 aa1.49□□□□□ -2.17
MSH2YOL090W COX9P07255 59 aa1.49□□□□□ -2.17
MSH2YOL090W SDH6Q3E785 79 aa1.48□□□□□ -2.17
MSH2YOL090W RPS30AP0CX33 63 aaKnown RBP1.48□□□□□ -2.17
MSH2YOL090W RPS30BP0CX34 63 aaKnown RBP1.48□□□□□ -2.17
MSH2YOL090W HOR7Q05827 59 aa1.46□□□□□ -2.18
MSH2YOL090W YPR108W-AQ3E7B3 70 aa1.45□□□□□ -2.18
MSH2YOL090W YBR072C-AQ3E794 53 aa1.45□□□□□ -2.18
MSH2YOL090W YJR107C-AP0CT86 78 aa1.45□□□□□ -2.18
MSH2YOL090W YOR192C-CQ3E736 78 aa1.45□□□□□ -2.18
MSH2YOL090W YOL097W-AQ3E7Y9 61 aa1.44□□□□□ -2.18
MSH2YOL090W RPL38P49167 78 aaKnown RBP1.42□□□□□ -2.18
MSH2YOL090W YDR182W-AQ3E796 67 aa1.42□□□□□ -2.18
MSH2YOL090W YOL166W-AQ8TGJ1 51 aa1.41□□□□□ -2.18
MSH2YOL090W YKL023C-AQ2V2P3 75 aa1.41□□□□□ -2.18
MSH2YOL090W YLR146W-AQ2V2P1 62 aa1.4□□□□□ -2.19
MSH2YOL090W HUB1Q6Q546 73 aa1.4□□□□□ -2.19
MSH2YOL090W RPL37AP49166 88 aaKnown RBP1.38□□□□□ -2.19
MSH2YOL090W YGL258W-AQ3E740 77 aa1.37□□□□□ -2.19
MSH2YOL090W YLR307C-AQ3E825 87 aa1.37□□□□□ -2.19
MSH2YOL090W YLR157W-EP0CF00 54 aa1.37□□□□□ -2.19
MSH2YOL090W YBL039W-BP0C268 59 aa1.37□□□□□ -2.19
MSH2YOL090W YOL164W-AQ3E7A5 60 aa1.36□□□□□ -2.19
MSH2YOL090W YBR200W-AQ3E755 54 aa1.35□□□□□ -2.19
MSH2YOL090W COA2Q3E823 68 aa1.34□□□□□ -2.19
MSH2YOL090W YOR011W-AQ3E807 68 aa1.34□□□□□ -2.2
MSH2YOL090W YGR025WP53216 100 aa1.33□□□□□ -2.2
MSH2YOL090W YMR001C-AQ8TGS9 76 aa1.33□□□□□ -2.2
MSH2YOL090W YLR157W-DP0CE99 70 aa1.31□□□□□ -2.2
MSH2YOL090W YPR010C-AA5Z2X5 72 aa1.3□□□□□ -2.2
MSH2YOL090W YOR394C-AQ8TGJ0 55 aa1.29□□□□□ -2.2
MSH2YOL090W TOM7P53507 60 aa1.27□□□□□ -2.21
MSH2YOL090W YLR342W-AQ3E810 57 aa1.27□□□□□ -2.21
MSH2YOL090W YFR009W-AP0C5M9 85 aa1.26□□□□□ -2.21
MSH2YOL090W YBR016WP38216 128 aa1.26□□□□□ -2.21
MSH2YOL090W YLL066W-BQ8TGJ7 56 aa1.26□□□□□ -2.21
MSH2YOL090W RPL37BP51402 88 aaKnown RBP1.24□□□□□ -2.21
MSH2YOL090W PMP3P87284 55 aa1.22□□□□□ -2.21
MSH2YOL090W YDR034C-AP0C289 58 aa1.22□□□□□ -2.21
MSH2YOL090W OLI1P61829 76 aa1.22□□□□□ -2.21
MSH2YOL090W YBL044WP38194 122 aa1.18□□□□□ -2.22
MSH2YOL090W TOS6P48560 102 aa1.16□□□□□ -2.22
MSH2YOL090W YOR008C-AQ3E7B9 74 aa1.16□□□□□ -2.22
MSH2YOL090W RPS29AP41057 56 aaKnown RBP1.14□□□□□ -2.23
MSH2YOL090W YCR108CQ3E819 63 aa1.14□□□□□ -2.23
MSH2YOL090W YBR230W-AQ3E762 66 aa1.12□□□□□ -2.23
MSH2YOL090W RPS29BP41058 56 aaKnown RBP1.1□□□□□ -2.23
MSH2YOL090W YLL006W-AQ3E814 58 aa1.1□□□□□ -2.23
MSH2YOL090W RPL29P05747 59 aaPredicted RBP1.1□□□□□ -2.23
MSH2YOL090W DDR2P89113 61 aa1.07□□□□□ -2.24
MSH2YOL090W Q0017Q9ZZX8 53 aa1.06□□□□□ -2.24
MSH2YOL090W YJL127C-BQ3E828 52 aa1.06□□□□□ -2.24
MSH2YOL090W YGR146C-AQ8TGT9 53 aa1.06□□□□□ -2.24
MSH2YOL090W YJL133C-AQ3E7A3 74 aa1.01□□□□□ -2.25
MSH2YOL090W YHR073W-AP0C5N7 58 aa0.94□□□□□ -2.26
MSH2YOL090W YOR316C-AQ3E806 69 aa0.91□□□□□ -2.26
MSH2YOL090W YML054C-AQ3E809 52 aa0.84□□□□□ -2.27
MSH2YOL090W YOR072W-BQ3E832 53 aa0.83□□□□□ -2.28
MSH2YOL090W YHR050W-AQ05451 56 aa0.63□□□□□ -2.31
Retrieved 63 of 5,963 RNA–protein pairs in 8.7 ms