RNA–Protein interactions for RNA: YNL330C

RPD3, Transcript of Histone deacetylase, component of both the Rpd3S and Rpd3L complexes, yeastyeast

Gene RPD3, Length 1,302 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPD3YNL330C MMS2P53152 137 aa5.49□□□□□ -1.53
RPD3YNL330C YDL012CQ12489 107 aa5.49□□□□□ -1.53
RPD3YNL330C YMR122CQ03879 124 aa5.48□□□□□ -1.53
RPD3YNL330C HUB1Q6Q546 73 aa5.48□□□□□ -1.53
RPD3YNL330C HHF1P02309 103 aaKnown RBP5.45□□□□□ -1.54
RPD3YNL330C YGL149WP53116 101 aa5.44□□□□□ -1.54
RPD3YNL330C YMR001C-AQ8TGS9 76 aa5.44□□□□□ -1.54
RPD3YNL330C YHR073W-AP0C5N7 58 aa5.43□□□□□ -1.54
RPD3YNL330C YER188C-AP0C0V2 99 aa5.42□□□□□ -1.54
RPD3YNL330C OST5Q92316 86 aa5.42□□□□□ -1.54
RPD3YNL330C YDR010CQ12426 110 aa5.41□□□□□ -1.54
RPD3YNL330C YFR032C-BQ8TGU2 87 aa5.39□□□□□ -1.55
RPD3YNL330C YJR128WP47162 119 aa5.37□□□□□ -1.55
RPD3YNL330C YNL277W-AQ3E7Z0 62 aa5.35□□□□□ -1.55
RPD3YNL330C DDR48P18899 430 aaKnown RBP5.34□□□□□ -1.55
RPD3YNL330C YGR146C-AQ8TGT9 53 aa5.34□□□□□ -1.55
RPD3YNL330C YOR316C-AQ3E806 69 aa5.32□□□□□ -1.56
RPD3YNL330C YLR255CO13574 117 aa5.31□□□□□ -1.56
RPD3YNL330C YCR095W-AQ3E787 52 aa5.3□□□□□ -1.56
RPD3YNL330C COX8P04039 78 aa5.28□□□□□ -1.56
RPD3YNL330C COX7P10174 60 aa5.26□□□□□ -1.57
RPD3YNL330C YBR201C-AQ2V2Q3 67 aa5.25□□□□□ -1.57
RPD3YNL330C YBL008W-AQ3E821 79 aa5.22□□□□□ -1.57
RPD3YNL330C YNL122CP53921 115 aaPredicted RBP5.19□□□□□ -1.58
RPD3YNL330C OLI1P61829 76 aa5.18□□□□□ -1.58
RPD3YNL330C ATP17Q06405 101 aa5.18□□□□□ -1.58
RPD3YNL330C MRX7P53869 86 aa5.16□□□□□ -1.58
RPD3YNL330C YBR016WP38216 128 aa5.15□□□□□ -1.59
RPD3YNL330C YIL156W-BQ2V2P4 73 aa5.14□□□□□ -1.59
RPD3YNL330C YJL144WP47009 104 aa5.12□□□□□ -1.59
RPD3YNL330C YFL067WP43537 175 aa5.1□□□□□ -1.59
RPD3YNL330C RPL37BP51402 88 aaKnown RBP5.09□□□□□ -1.59
RPD3YNL330C FYV12Q08559 129 aa5.06□□□□□ -1.6
RPD3YNL330C YML100W-AQ8TGT0 57 aa5.04□□□□□ -1.6
RPD3YNL330C YER175W-AQ8TGU4 54 aa5.04□□□□□ -1.6
RPD3YNL330C YOR376W-AQ3E805 51 aa5.01□□□□□ -1.61
RPD3YNL330C YGL034CP53186 121 aa4.99□□□□□ -1.61
RPD3YNL330C CMC4Q3E7A9 73 aa4.89□□□□□ -1.63
RPD3YNL330C YEL014CP39999 101 aa4.86□□□□□ -1.63
RPD3YNL330C YGL014C-AP0C5N1 53 aa4.83□□□□□ -1.64
RPD3YNL330C QCR10P37299 77 aa4.81□□□□□ -1.64
RPD3YNL330C YOR394C-AQ8TGJ0 55 aa4.81□□□□□ -1.64
RPD3YNL330C YCR108CQ3E819 63 aa4.78□□□□□ -1.64
RPD3YNL330C YBL044WP38194 122 aa4.75□□□□□ -1.65
RPD3YNL330C Q0017Q9ZZX8 53 aa4.75□□□□□ -1.65
RPD3YNL330C YML054C-AQ3E809 52 aa4.67□□□□□ -1.66
RPD3YNL330C YJL009WP47078 108 aa4.65□□□□□ -1.67
RPD3YNL330C MDN1Q12019 4910 aaKnown RBP4.65□□□□□ -1.67
RPD3YNL330C RPL37AP49166 88 aaKnown RBP4.62□□□□□ -1.67
RPD3YNL330C SOM1Q05676 74 aa4.62□□□□□ -1.67
RPD3YNL330C YOR072W-BQ3E832 53 aa4.5□□□□□ -1.69
RPD3YNL330C YDR210WQ03482 75 aa4.43□□□□□ -1.7
RPD3YNL330C HHY1P39982 102 aa4.36□□□□□ -1.71
RPD3YNL330C YBR072C-AQ3E794 53 aa4.36□□□□□ -1.71
RPD3YNL330C YHR032W-AP0C5N6 59 aa4.09□□□□□ -1.75
RPD3YNL330C YER078W-AQ3E7A2 54 aa4.09□□□□□ -1.75
RPD3YNL330C YAL067W-AQ8TGK6 75 aa4.09□□□□□ -1.75
RPD3YNL330C RPS29BP41058 56 aaKnown RBP3.67□□□□□ -1.82
RPD3YNL330C YHR050W-AQ05451 56 aa3.63□□□□□ -1.83
RPD3YNL330C RPS29AP41057 56 aaKnown RBP3.45□□□□□ -1.86
RPD3YNL330C YOL164W-AQ3E7A5 60 aa3.44□□□□□ -1.86
RPD3YNL330C YHR086W-AQ3E746 53 aa3.25□□□□□ -1.89
RPD3YNL330C YLR157W-EP0CF00 54 aa3.07□□□□□ -1.92
Retrieved 63 of 5,963 RNA–protein pairs in 9.5 ms