RNA–Protein interactions for RNA: YNL088W

TOP2, Transcript of Topoisomerase II, yeastyeast

Gene TOP2, Length 4,287 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TOP2YNL088W RPL43AP0CX25 92 aaKnown RBP1.34□□□□□ -2.2
TOP2YNL088W RPL43BP0CX26 92 aa1.34□□□□□ -2.2
TOP2YNL088W RPS27BP38711 82 aa1.34□□□□□ -2.2
TOP2YNL088W YHR213W-BQ8TGK1 99 aa1.34□□□□□ -2.2
TOP2YNL088W SEN1Q00416 2231 aaKnown RBP1.33□□□□□ -2.2
TOP2YNL088W SIP18P50263 79 aa1.33□□□□□ -2.2
TOP2YNL088W YLR307C-AQ3E825 87 aa1.33□□□□□ -2.2
TOP2YNL088W YJL133C-AQ3E7A3 74 aa1.32□□□□□ -2.2
TOP2YNL088W FLO1P32768 1537 aa1.31□□□□□ -2.2
TOP2YNL088W YCR108CQ3E819 63 aa1.31□□□□□ -2.2
TOP2YNL088W YLL006W-AQ3E814 58 aa1.3□□□□□ -2.2
TOP2YNL088W YBR016WP38216 128 aa1.29□□□□□ -2.2
TOP2YNL088W YGL258W-AQ3E740 77 aa1.29□□□□□ -2.2
TOP2YNL088W YGR146C-AQ8TGT9 53 aa1.28□□□□□ -2.2
TOP2YNL088W DDR2P89113 61 aa1.28□□□□□ -2.21
TOP2YNL088W YBL044WP38194 122 aa1.27□□□□□ -2.21
TOP2YNL088W URA2P07259 2214 aaKnown RBP1.27□□□□□ -2.21
TOP2YNL088W RPL37BP51402 88 aaKnown RBP1.27□□□□□ -2.21
TOP2YNL088W RPL29P05747 59 aaPredicted RBP1.27□□□□□ -2.21
TOP2YNL088W YJL127C-BQ3E828 52 aa1.22□□□□□ -2.21
TOP2YNL088W YOR316C-AQ3E806 69 aa1.2□□□□□ -2.22
TOP2YNL088W YOL164W-AQ3E7A5 60 aa1.19□□□□□ -2.22
TOP2YNL088W YLR157W-EP0CF00 54 aa1.17□□□□□ -2.22
TOP2YNL088W NCE101Q02820 53 aa1.16□□□□□ -2.22
TOP2YNL088W RPL37AP49166 88 aaKnown RBP1.14□□□□□ -2.23
TOP2YNL088W PMP3P87284 55 aa1.13□□□□□ -2.23
TOP2YNL088W YDR524C-BQ3E6R4 66 aa1.13□□□□□ -2.23
TOP2YNL088W YHR073W-AP0C5N7 58 aa1.12□□□□□ -2.23
TOP2YNL088W YOR072W-BQ3E832 53 aa1.12□□□□□ -2.23
TOP2YNL088W HOR7Q05827 59 aa1.11□□□□□ -2.23
TOP2YNL088W YDR034C-AP0C289 58 aa1.07□□□□□ -2.24
TOP2YNL088W TAO3P40468 2376 aa1.04□□□□□ -2.24
TOP2YNL088W RPS29BP41058 56 aaKnown RBP0.99□□□□□ -2.25
TOP2YNL088W YMR105W-AQ8TGS8 64 aa0.99□□□□□ -2.25
TOP2YNL088W RPS29AP41057 56 aaKnown RBP0.92□□□□□ -2.26
TOP2YNL088W RPL39P04650 51 aa0.92□□□□□ -2.26
TOP2YNL088W TRA1P38811 3744 aa0.92□□□□□ -2.26
TOP2YNL088W MEC1P38111 2368 aa0.9□□□□□ -2.26
TOP2YNL088W PRP8P33334 2413 aaKnown RBP0.89□□□□□ -2.27
TOP2YNL088W YLL066W-BQ8TGJ7 56 aa0.89□□□□□ -2.27
TOP2YNL088W YML054C-AQ3E809 52 aa0.87□□□□□ -2.27
TOP2YNL088W YHR050W-AQ05451 56 aa0.84□□□□□ -2.28
TOP2YNL088W Q0017Q9ZZX8 53 aa0.84□□□□□ -2.28
TOP2YNL088W YIL046W-AQ3E7Z4 54 aa0.81□□□□□ -2.28
TOP2YNL088W TOR1P35169 2470 aa0.78□□□□□ -2.28
TOP2YNL088W CSF1Q12150 2958 aa0.76□□□□□ -2.29
TOP2YNL088W IRA2P19158 3079 aa0.73□□□□□ -2.29
TOP2YNL088W UTP20P35194 2493 aaKnown RBP0.73□□□□□ -2.29
TOP2YNL088W MDN1Q12019 4910 aaKnown RBP0.7□□□□□ -2.3
TOP2YNL088W IRA1P18963 3092 aa0.7□□□□□ -2.3
TOP2YNL088W YBR056W-AI2HB52 66 aa0.7□□□□□ -2.3
TOP2YNL088W VPS13Q07878 3144 aa0.68□□□□□ -2.3
TOP2YNL088W TOR2P32600 2474 aaKnown RBP0.68□□□□□ -2.3
TOP2YNL088W GCN1P33892 2672 aaKnown RBP0.67□□□□□ -2.3
TOP2YNL088W FMP27Q06179 2628 aa0.66□□□□□ -2.3
TOP2YNL088W NUM1Q00402 2748 aa0.64□□□□□ -2.31
TOP2YNL088W Q0297Q9ZZV8 51 aa0.64□□□□□ -2.31
TOP2YNL088W TOM1Q03280 3268 aa0.63□□□□□ -2.31
TOP2YNL088W YDR034W-BQ6Q5X2 51 aa0.6□□□□□ -2.31
TOP2YNL088W TEL1P38110 2787 aa0.58□□□□□ -2.32
TOP2YNL088W YPR117WQ06116 2489 aa0.57□□□□□ -2.32
TOP2YNL088W CUP1-1P0CX80 61 aa0.57□□□□□ -2.32
TOP2YNL088W CUP1-2P0CX81 61 aa0.57□□□□□ -2.32
Retrieved 63 of 5,963 RNA–protein pairs in 11.4 ms