RNA–Protein interactions for RNA: YMR308C

PSE1, Transcript of Karyopherin/importin that interacts with the nuclear pore complex, yeastyeast

Gene PSE1, Length 3,270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PSE1YMR308C YBR230W-AQ3E762 66 aa2.99□□□□□ -1.93
PSE1YMR308C YCR108CQ3E819 63 aa2.99□□□□□ -1.93
PSE1YMR308C RPS27BP38711 82 aa2.98□□□□□ -1.93
PSE1YMR308C RPC10P40422 70 aa2.96□□□□□ -1.94
PSE1YMR308C YBL044WP38194 122 aa2.94□□□□□ -1.94
PSE1YMR308C DDR2P89113 61 aa2.94□□□□□ -1.94
PSE1YMR308C YLR307C-AQ3E825 87 aa2.92□□□□□ -1.94
PSE1YMR308C PMP3P87284 55 aa2.91□□□□□ -1.94
PSE1YMR308C OLI1P61829 76 aa2.89□□□□□ -1.95
PSE1YMR308C YGR146C-AQ8TGT9 53 aa2.88□□□□□ -1.95
PSE1YMR308C YJL009WP47078 108 aa2.88□□□□□ -1.95
PSE1YMR308C YMR105W-AQ8TGS8 64 aa2.87□□□□□ -1.95
PSE1YMR308C YDR524C-BQ3E6R4 66 aa2.87□□□□□ -1.95
PSE1YMR308C YMR230W-AQ3E7B5 62 aa2.86□□□□□ -1.95
PSE1YMR308C YNL146C-AQ3E7Z1 64 aa2.85□□□□□ -1.95
PSE1YMR308C RPL37BP51402 88 aaKnown RBP2.85□□□□□ -1.95
PSE1YMR308C IRA2P19158 3079 aa2.83□□□□□ -1.96
PSE1YMR308C RPL39P04650 51 aa2.82□□□□□ -1.96
PSE1YMR308C YBR016WP38216 128 aa2.82□□□□□ -1.96
PSE1YMR308C VPS13Q07878 3144 aa2.81□□□□□ -1.96
PSE1YMR308C HFA1P32874 2273 aa2.79□□□□□ -1.96
PSE1YMR308C TOM1Q03280 3268 aa2.78□□□□□ -1.96
PSE1YMR308C YHR212W-AP0CX91 67 aa2.73□□□□□ -1.97
PSE1YMR308C HOR7Q05827 59 aa2.73□□□□□ -1.97
PSE1YMR308C YIL046W-AQ3E7Z4 54 aa2.72□□□□□ -1.97
PSE1YMR308C YOR316C-AQ3E806 69 aa2.72□□□□□ -1.97
PSE1YMR308C HHY1P39982 102 aa2.71□□□□□ -1.98
PSE1YMR308C TAO3P40468 2376 aa2.71□□□□□ -1.98
PSE1YMR308C YHR086W-AQ3E746 53 aa2.7□□□□□ -1.98
PSE1YMR308C YBR072C-AQ3E794 53 aa2.68□□□□□ -1.98
PSE1YMR308C YGL260WP53056 76 aa2.66□□□□□ -1.98
PSE1YMR308C MEC1P38111 2368 aa2.63□□□□□ -1.99
PSE1YMR308C YHR073W-AP0C5N7 58 aa2.62□□□□□ -1.99
PSE1YMR308C IRA1P18963 3092 aa2.6□□□□□ -1.99
PSE1YMR308C RPL37AP49166 88 aaKnown RBP2.56□□□□□ -2
PSE1YMR308C PRP8P33334 2413 aaKnown RBP2.56□□□□□ -2
PSE1YMR308C YOL164W-AQ3E7A5 60 aa2.53□□□□□ -2
PSE1YMR308C TRA1P38811 3744 aa2.53□□□□□ -2
PSE1YMR308C CSF1Q12150 2958 aa2.52□□□□□ -2.01
PSE1YMR308C YDR034C-AP0C289 58 aa2.52□□□□□ -2.01
PSE1YMR308C YOR072W-BQ3E832 53 aa2.49□□□□□ -2.01
PSE1YMR308C YLL066W-BQ8TGJ7 56 aa2.48□□□□□ -2.01
PSE1YMR308C GCN1P33892 2672 aaKnown RBP2.48□□□□□ -2.01
PSE1YMR308C YDR034W-BQ6Q5X2 51 aa2.41□□□□□ -2.02
PSE1YMR308C Q0297Q9ZZV8 51 aa2.32□□□□□ -2.04
PSE1YMR308C YLR157W-EP0CF00 54 aa2.31□□□□□ -2.04
PSE1YMR308C UTP20P35194 2493 aaKnown RBP2.3□□□□□ -2.04
PSE1YMR308C FMP27Q06179 2628 aa2.17□□□□□ -2.06
PSE1YMR308C YBR056W-AI2HB52 66 aa2.15□□□□□ -2.07
PSE1YMR308C NUM1Q00402 2748 aa2.12□□□□□ -2.07
PSE1YMR308C YPR117WQ06116 2489 aa2.06□□□□□ -2.08
PSE1YMR308C YML054C-AQ3E809 52 aa2.03□□□□□ -2.08
PSE1YMR308C DYN1P36022 4092 aa2.01□□□□□ -2.09
PSE1YMR308C TEL1P38110 2787 aa2□□□□□ -2.09
PSE1YMR308C TOR2P32600 2474 aaKnown RBP1.98□□□□□ -2.09
PSE1YMR308C Q0017Q9ZZX8 53 aa1.96□□□□□ -2.1
PSE1YMR308C TOR1P35169 2470 aa1.94□□□□□ -2.1
PSE1YMR308C YHR050W-AQ05451 56 aa1.86□□□□□ -2.11
PSE1YMR308C RPS29BP41058 56 aaKnown RBP1.83□□□□□ -2.12
PSE1YMR308C RPS29AP41057 56 aaKnown RBP1.83□□□□□ -2.12
PSE1YMR308C CUP1-1P0CX80 61 aa1.73□□□□□ -2.13
PSE1YMR308C CUP1-2P0CX81 61 aa1.73□□□□□ -2.13
PSE1YMR308C MDN1Q12019 4910 aaKnown RBP1.41□□□□□ -2.18
Retrieved 63 of 5,963 RNA–protein pairs in 9.9 ms