RNA–Protein interactions for RNA: YMR183C

SSO2, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO2, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO2YMR183C YLR157W-EP0CF00 54 aa1.58□□□□□ -2.16
SSO2YMR183C YKL018C-AQ3E7A7 99 aa1.58□□□□□ -2.16
SSO2YMR183C YLR307C-AQ3E825 87 aa1.58□□□□□ -2.16
SSO2YMR183C YPR108W-AQ3E7B3 70 aa1.57□□□□□ -2.16
SSO2YMR183C YNL190WP53872 204 aa1.56□□□□□ -2.16
SSO2YMR183C RPL37BP51402 88 aaKnown RBP1.55□□□□□ -2.16
SSO2YMR183C YIL134C-AQ45U18 67 aa1.54□□□□□ -2.16
SSO2YMR183C YBR032WP38223 100 aa1.53□□□□□ -2.16
SSO2YMR183C YJR107C-AP0CT86 78 aa1.52□□□□□ -2.17
SSO2YMR183C YDR182W-AQ3E796 67 aa1.52□□□□□ -2.17
SSO2YMR183C EDC1P53080 175 aaPredicted RBP1.5□□□□□ -2.17
SSO2YMR183C NCE101Q02820 53 aa1.5□□□□□ -2.17
SSO2YMR183C HUB1Q6Q546 73 aa1.5□□□□□ -2.17
SSO2YMR183C YOL164W-AQ3E7A5 60 aa1.48□□□□□ -2.17
SSO2YMR183C RPS30AP0CX33 63 aaKnown RBP1.47□□□□□ -2.17
SSO2YMR183C RPS30BP0CX34 63 aaKnown RBP1.47□□□□□ -2.17
SSO2YMR183C SIP18P50263 79 aa1.45□□□□□ -2.18
SSO2YMR183C YLR146W-AQ2V2P1 62 aa1.45□□□□□ -2.18
SSO2YMR183C YKL023C-AQ2V2P3 75 aa1.45□□□□□ -2.18
SSO2YMR183C YBL039W-BP0C268 59 aa1.41□□□□□ -2.18
SSO2YMR183C YBR200W-AQ3E755 54 aa1.41□□□□□ -2.18
SSO2YMR183C YOL166W-AQ8TGJ1 51 aa1.41□□□□□ -2.18
SSO2YMR183C YBR016WP38216 128 aa1.4□□□□□ -2.19
SSO2YMR183C SMX2P40204 77 aaKnown RBP1.4□□□□□ -2.19
SSO2YMR183C YOR011W-AQ3E807 68 aa1.4□□□□□ -2.19
SSO2YMR183C RPL39P04650 51 aa1.38□□□□□ -2.19
SSO2YMR183C YFR009W-AP0C5M9 85 aa1.37□□□□□ -2.19
SSO2YMR183C YOR394C-AQ8TGJ0 55 aa1.36□□□□□ -2.19
SSO2YMR183C YMR105W-AQ8TGS8 64 aa1.36□□□□□ -2.19
SSO2YMR183C OLI1P61829 76 aa1.35□□□□□ -2.19
SSO2YMR183C YMR001C-AQ8TGS9 76 aa1.33□□□□□ -2.2
SSO2YMR183C YGR025WP53216 100 aa1.32□□□□□ -2.2
SSO2YMR183C YLR157W-DP0CE99 70 aa1.31□□□□□ -2.2
SSO2YMR183C RPS29BP41058 56 aaKnown RBP1.31□□□□□ -2.2
SSO2YMR183C HOR7Q05827 59 aa1.3□□□□□ -2.2
SSO2YMR183C YBL044WP38194 122 aa1.28□□□□□ -2.2
SSO2YMR183C YOR192C-CQ3E736 78 aa1.27□□□□□ -2.21
SSO2YMR183C COX9P07255 59 aa1.23□□□□□ -2.21
SSO2YMR183C YBR230W-AQ3E762 66 aa1.21□□□□□ -2.22
SSO2YMR183C YGL258W-AQ3E740 77 aa1.14□□□□□ -2.23
SSO2YMR183C YLL066W-BQ8TGJ7 56 aa1.14□□□□□ -2.23
SSO2YMR183C TOM7P53507 60 aa1.11□□□□□ -2.23
SSO2YMR183C YOR008C-AQ3E7B9 74 aa1.11□□□□□ -2.23
SSO2YMR183C YCR108CQ3E819 63 aa1.1□□□□□ -2.23
SSO2YMR183C YDR034C-AP0C289 58 aa1.09□□□□□ -2.23
SSO2YMR183C YPR010C-AA5Z2X5 72 aa1.08□□□□□ -2.24
SSO2YMR183C TOS6P48560 102 aa1.08□□□□□ -2.24
SSO2YMR183C YGR146C-AQ8TGT9 53 aa1.07□□□□□ -2.24
SSO2YMR183C COA2Q3E823 68 aa1.05□□□□□ -2.24
SSO2YMR183C YLR342W-AQ3E810 57 aa1.01□□□□□ -2.25
SSO2YMR183C PMP3P87284 55 aa0.98□□□□□ -2.25
SSO2YMR183C RPS29AP41057 56 aaKnown RBP0.89□□□□□ -2.27
SSO2YMR183C YLL006W-AQ3E814 58 aa0.87□□□□□ -2.27
SSO2YMR183C YOR072W-BQ3E832 53 aa0.86□□□□□ -2.27
SSO2YMR183C RPL29P05747 59 aaPredicted RBP0.85□□□□□ -2.27
SSO2YMR183C DDR2P89113 61 aa0.84□□□□□ -2.27
SSO2YMR183C Q0017Q9ZZX8 53 aa0.81□□□□□ -2.28
SSO2YMR183C YJL127C-BQ3E828 52 aa0.79□□□□□ -2.28
SSO2YMR183C YOR316C-AQ3E806 69 aa0.76□□□□□ -2.29
SSO2YMR183C YJL133C-AQ3E7A3 74 aa0.74□□□□□ -2.29
SSO2YMR183C YHR073W-AP0C5N7 58 aa0.72□□□□□ -2.29
SSO2YMR183C YML054C-AQ3E809 52 aa0.64□□□□□ -2.31
SSO2YMR183C YHR050W-AQ05451 56 aa0.55□□□□□ -2.32
Retrieved 63 of 5,963 RNA–protein pairs in 9.6 ms