RNA–Protein interactions for RNA: YMR145C

NDE1, Transcript of Mitochondrial external NADH dehydrogenase, yeastyeast

Gene NDE1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NDE1YMR145C YJR128WP47162 119 aa4.73□□□□□ -1.65
NDE1YMR145C RPL33AP05744 107 aaKnown RBP4.72□□□□□ -1.65
NDE1YMR145C YGR146C-AQ8TGT9 53 aa4.72□□□□□ -1.65
NDE1YMR145C RPL43AP0CX25 92 aaKnown RBP4.7□□□□□ -1.66
NDE1YMR145C RPL43BP0CX26 92 aa4.7□□□□□ -1.66
NDE1YMR145C YGR240C-AQ3E786 66 aa4.7□□□□□ -1.66
NDE1YMR145C GIS2P53849 153 aaKnown RBP RIP-Chip data4.69□□□□□ -1.66not detected
NDE1YMR145C TAR1Q8TGM6 124 aa4.67□□□□□ -1.66
NDE1YMR145C COX7P10174 60 aa4.66□□□□□ -1.66
NDE1YMR145C RPL37BP51402 88 aaKnown RBP4.63□□□□□ -1.67
NDE1YMR145C YMR230W-AQ3E7B5 62 aa4.62□□□□□ -1.67
NDE1YMR145C YAL067W-AQ8TGK6 75 aa4.62□□□□□ -1.67
NDE1YMR145C YCR108CQ3E819 63 aa4.61□□□□□ -1.67
NDE1YMR145C OLI1P61829 76 aa4.57□□□□□ -1.68
NDE1YMR145C HFA1P32874 2273 aa4.55□□□□□ -1.68
NDE1YMR145C YBL044WP38194 122 aa4.54□□□□□ -1.68
NDE1YMR145C YFL067WP43537 175 aa4.54□□□□□ -1.68
NDE1YMR145C IRA2P19158 3079 aa4.53□□□□□ -1.68
NDE1YMR145C YJL144WP47009 104 aa4.51□□□□□ -1.69
NDE1YMR145C YHR073W-AP0C5N7 58 aa4.51□□□□□ -1.69
NDE1YMR145C LCL1Q02786 101 aa4.49□□□□□ -1.69
NDE1YMR145C YOR316C-AQ3E806 69 aa4.49□□□□□ -1.69
NDE1YMR145C YBR016WP38216 128 aa4.45□□□□□ -1.7
NDE1YMR145C YLL066W-BQ8TGJ7 56 aa4.41□□□□□ -1.7
NDE1YMR145C YJL009WP47078 108 aa4.35□□□□□ -1.71
NDE1YMR145C YHR212W-AP0CX91 67 aa4.32□□□□□ -1.72
NDE1YMR145C VPS13Q07878 3144 aa4.31□□□□□ -1.72
NDE1YMR145C TOM1Q03280 3268 aa4.3□□□□□ -1.72
NDE1YMR145C YBR072C-AQ3E794 53 aa4.28□□□□□ -1.72
NDE1YMR145C HHY1P39982 102 aa4.18□□□□□ -1.74
NDE1YMR145C RPL37AP49166 88 aaKnown RBP4.17□□□□□ -1.74
NDE1YMR145C YDR034C-AP0C289 58 aa4.16□□□□□ -1.74
NDE1YMR145C TAO3P40468 2376 aa4.14□□□□□ -1.75
NDE1YMR145C GCN1P33892 2672 aaKnown RBP4.13□□□□□ -1.75
NDE1YMR145C PRP8P33334 2413 aaKnown RBP4.12□□□□□ -1.75
NDE1YMR145C MEC1P38111 2368 aa4.12□□□□□ -1.75
NDE1YMR145C CSF1Q12150 2958 aa4.1□□□□□ -1.75
NDE1YMR145C YOR072W-BQ3E832 53 aa4.09□□□□□ -1.76
NDE1YMR145C TRA1P38811 3744 aa4.04□□□□□ -1.76
NDE1YMR145C YGL260WP53056 76 aa4.03□□□□□ -1.76
NDE1YMR145C Q0297Q9ZZV8 51 aa4.01□□□□□ -1.77
NDE1YMR145C UTP20P35194 2493 aaKnown RBP3.93□□□□□ -1.78
NDE1YMR145C IRA1P18963 3092 aa3.92□□□□□ -1.78
NDE1YMR145C YDR034W-BQ6Q5X2 51 aa3.81□□□□□ -1.8
NDE1YMR145C YOL164W-AQ3E7A5 60 aa3.74□□□□□ -1.81
NDE1YMR145C FMP27Q06179 2628 aa3.71□□□□□ -1.82
NDE1YMR145C YHR086W-AQ3E746 53 aa3.69□□□□□ -1.82
NDE1YMR145C YPR117WQ06116 2489 aa3.66□□□□□ -1.82
NDE1YMR145C YBR056W-AI2HB52 66 aa3.65□□□□□ -1.83
NDE1YMR145C YML054C-AQ3E809 52 aa3.63□□□□□ -1.83
NDE1YMR145C TOR2P32600 2474 aaKnown RBP3.44□□□□□ -1.86
NDE1YMR145C Q0017Q9ZZX8 53 aa3.4□□□□□ -1.86
NDE1YMR145C TEL1P38110 2787 aa3.35□□□□□ -1.87
NDE1YMR145C TOR1P35169 2470 aa3.33□□□□□ -1.88
NDE1YMR145C YLR157W-EP0CF00 54 aa3.33□□□□□ -1.88
NDE1YMR145C DYN1P36022 4092 aa3.32□□□□□ -1.88
NDE1YMR145C NUM1Q00402 2748 aa3.29□□□□□ -1.88
NDE1YMR145C YHR050W-AQ05451 56 aa3.16□□□□□ -1.9
NDE1YMR145C RPS29AP41057 56 aaKnown RBP3.05□□□□□ -1.92
NDE1YMR145C RPS29BP41058 56 aaKnown RBP2.84□□□□□ -1.95
NDE1YMR145C CUP1-1P0CX80 61 aa2.53□□□□□ -2
NDE1YMR145C CUP1-2P0CX81 61 aa2.53□□□□□ -2
NDE1YMR145C MDN1Q12019 4910 aaKnown RBP2.39□□□□□ -2.03
Retrieved 63 of 5,963 RNA–protein pairs in 31.2 ms