RNA–Protein interactions for RNA: YMR118C

SHH3, Transcript of Putative mitochondrial inner membrane protein of unknown function, yeastyeast

Gene SHH3, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH3YMR118C YML100W-AQ8TGT0 57 aa2.25□□□□□ -2.05
SHH3YMR118C YJR085CP47131 105 aaKnown RBP2.24□□□□□ -2.05
SHH3YMR118C YGL034CP53186 121 aa2.24□□□□□ -2.05
SHH3YMR118C ATP17Q06405 101 aa2.24□□□□□ -2.05
SHH3YMR118C YIL156W-BQ2V2P4 73 aa2.24□□□□□ -2.05
SHH3YMR118C PRP8P33334 2413 aaKnown RBP2.24□□□□□ -2.05
SHH3YMR118C MEC1P38111 2368 aa2.23□□□□□ -2.05
SHH3YMR118C YJR128WP47162 119 aa2.23□□□□□ -2.05
SHH3YMR118C YNL122CP53921 115 aaPredicted RBP2.22□□□□□ -2.05
SHH3YMR118C YPR195CQ06594 109 aa2.22□□□□□ -2.05
SHH3YMR118C YHR073W-AP0C5N7 58 aa2.21□□□□□ -2.06
SHH3YMR118C YGL149WP53116 101 aa2.21□□□□□ -2.06
SHH3YMR118C LCL2Q08045 131 aa2.21□□□□□ -2.06
SHH3YMR118C YBR201C-AQ2V2Q3 67 aa2.21□□□□□ -2.06
SHH3YMR118C YGR146C-AQ8TGT9 53 aa2.21□□□□□ -2.06
SHH3YMR118C YLR255CO13574 117 aa2.2□□□□□ -2.06
SHH3YMR118C COX8P04039 78 aa2.2□□□□□ -2.06
SHH3YMR118C YER175W-AQ8TGU4 54 aa2.2□□□□□ -2.06
SHH3YMR118C TEL1P38110 2787 aa2.18□□□□□ -2.06
SHH3YMR118C MRX7P53869 86 aa2.18□□□□□ -2.06
SHH3YMR118C YOR316C-AQ3E806 69 aa2.18□□□□□ -2.06
SHH3YMR118C YBL008W-AQ3E821 79 aa2.18□□□□□ -2.06
SHH3YMR118C LCL1Q02786 101 aa2.17□□□□□ -2.06
SHH3YMR118C UTP20P35194 2493 aaKnown RBP2.16□□□□□ -2.06
SHH3YMR118C OLI1P61829 76 aa2.16□□□□□ -2.06
SHH3YMR118C DDR48P18899 430 aaKnown RBP2.14□□□□□ -2.07
SHH3YMR118C FYV12Q08559 129 aa2.14□□□□□ -2.07
SHH3YMR118C YGL014C-AP0C5N1 53 aa2.13□□□□□ -2.07
SHH3YMR118C CUP1-1P0CX80 61 aa2.13□□□□□ -2.07
SHH3YMR118C CUP1-2P0CX81 61 aa2.13□□□□□ -2.07
SHH3YMR118C TOR1P35169 2470 aa2.13□□□□□ -2.07
SHH3YMR118C QCR10P37299 77 aa2.12□□□□□ -2.07
SHH3YMR118C YBR016WP38216 128 aa2.12□□□□□ -2.07
SHH3YMR118C RPL37BP51402 88 aaKnown RBP2.12□□□□□ -2.07
SHH3YMR118C COX7P10174 60 aa2.1□□□□□ -2.07
SHH3YMR118C YJL144WP47009 104 aa2.1□□□□□ -2.07
SHH3YMR118C YEL014CP39999 101 aa2.08□□□□□ -2.08
SHH3YMR118C SOM1Q05676 74 aa2.04□□□□□ -2.08
SHH3YMR118C YBL044WP38194 122 aa2.03□□□□□ -2.08
SHH3YMR118C YCR108CQ3E819 63 aa2.03□□□□□ -2.08
SHH3YMR118C YOR394C-AQ8TGJ0 55 aa2.03□□□□□ -2.08
SHH3YMR118C NUM1Q00402 2748 aa2.01□□□□□ -2.09
SHH3YMR118C YFL067WP43537 175 aa1.97□□□□□ -2.09
SHH3YMR118C YDR210WQ03482 75 aa1.96□□□□□ -2.1
SHH3YMR118C RPL37AP49166 88 aaKnown RBP1.92□□□□□ -2.1
SHH3YMR118C YOR072W-BQ3E832 53 aa1.9□□□□□ -2.11
SHH3YMR118C YML054C-AQ3E809 52 aa1.87□□□□□ -2.11
SHH3YMR118C Q0017Q9ZZX8 53 aa1.87□□□□□ -2.11
SHH3YMR118C HHY1P39982 102 aa1.86□□□□□ -2.11
SHH3YMR118C YBR072C-AQ3E794 53 aa1.86□□□□□ -2.11
SHH3YMR118C CMC4Q3E7A9 73 aa1.86□□□□□ -2.11
SHH3YMR118C YJL009WP47078 108 aa1.85□□□□□ -2.11
SHH3YMR118C DYN1P36022 4092 aa1.85□□□□□ -2.11
SHH3YMR118C YER078W-AQ3E7A2 54 aa1.79□□□□□ -2.12
SHH3YMR118C YHR032W-AP0C5N6 59 aa1.64□□□□□ -2.15
SHH3YMR118C MDN1Q12019 4910 aaKnown RBP1.57□□□□□ -2.16
SHH3YMR118C YOL164W-AQ3E7A5 60 aa1.54□□□□□ -2.16
SHH3YMR118C YHR050W-AQ05451 56 aa1.51□□□□□ -2.17
SHH3YMR118C YAL067W-AQ8TGK6 75 aa1.47□□□□□ -2.17
SHH3YMR118C RPS29BP41058 56 aaKnown RBP1.39□□□□□ -2.19
SHH3YMR118C RPS29AP41057 56 aaKnown RBP1.34□□□□□ -2.19
SHH3YMR118C YLR157W-EP0CF00 54 aa1.31□□□□□ -2.2
SHH3YMR118C YHR086W-AQ3E746 53 aa1.19□□□□□ -2.22
Retrieved 63 of 5,963 RNA–protein pairs in 5.6 ms