RNA–Protein interactions for RNA: YMR067C

UBX4, Transcript of UBX domain-containing protein that interacts with Cdc48p, yeastyeast

Gene UBX4, Length 1,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX4YMR067C RPA12P32529 125 aaKnown RBP0.04□□□□□ -2.4
UBX4YMR067C SRB6P32570 121 aa0.04□□□□□ -2.4
UBX4YMR067C ATG8P38182 117 aaRIP-Chip data0.04□□□□□ -2.4not detected
UBX4YMR067C VMA21P41806 77 aa0.04□□□□□ -2.4
UBX4YMR067C RPL38P49167 78 aaKnown RBP0.04□□□□□ -2.4
UBX4YMR067C YGR039WP53225 103 aa0.04□□□□□ -2.4
UBX4YMR067C MRX7P53869 86 aa0.04□□□□□ -2.4
UBX4YMR067C SEN15Q04675 128 aa0.04□□□□□ -2.4
UBX4YMR067C YLR296WQ05898 108 aa0.04□□□□□ -2.4
UBX4YMR067C YOR394C-AQ8TGJ0 55 aa0.04□□□□□ -2.4
UBX4YMR067C ELC1Q03071 99 aa0.03□□□□□ -2.4
UBX4YMR067C YMR122CQ03879 124 aa0.03□□□□□ -2.4
UBX4YMR067C CNL1Q06333 122 aa0.03□□□□□ -2.4
UBX4YMR067C LSM6Q06406 86 aaKnown RBP0.03□□□□□ -2.4
UBX4YMR067C ZEO1Q08245 113 aa0.03□□□□□ -2.4
UBX4YMR067C YDR119W-AQ2V2P9 66 aa0.03□□□□□ -2.4
UBX4YMR067C YDR381C-AQ3E6R5 114 aa0.03□□□□□ -2.4
UBX4YMR067C YER181CP40097 107 aa0.02□□□□□ -2.41
UBX4YMR067C ATP17Q06405 101 aa0.02□□□□□ -2.41
UBX4YMR067C NAT5Q08689 176 aa0.02□□□□□ -2.41
UBX4YMR067C YBR201C-AQ2V2Q3 67 aa0.02□□□□□ -2.41
UBX4YMR067C PAI3P01094 68 aa0.01□□□□□ -2.41
UBX4YMR067C YLR157W-EP0CF00 54 aa0.01□□□□□ -2.41
UBX4YMR067C YCR085WP25650 117 aa0.01□□□□□ -2.41
UBX4YMR067C SSS1P35179 80 aa0.01□□□□□ -2.41
UBX4YMR067C CGR1P53188 120 aa0.01□□□□□ -2.41
UBX4YMR067C OST5Q92316 86 aa0.01□□□□□ -2.41
UBX4YMR067C PBI2P0CT04 75 aaKnown RBP0□□□□□ -2.41
UBX4YMR067C YLR363W-AQ3E747 85 aa0□□□□□ -2.41
UBX4YMR067C YFL041W-AQ3E817 63 aa0□□□□□ -2.41
UBX4YMR067C YIL134C-AQ45U18 67 aa0□□□□□ -2.41
UBX4YMR067C YEL014CP39999 101 aa-0.01□□□□□ -2.41
UBX4YMR067C YOR314WQ12506 109 aa-0.01□□□□□ -2.41
UBX4YMR067C YLR285C-AQ3E771 56 aa-0.01□□□□□ -2.41
UBX4YMR067C YCR108CQ3E819 63 aa-0.01□□□□□ -2.41
UBX4YMR067C HUB1Q6Q546 73 aa-0.01□□□□□ -2.41
UBX4YMR067C YSY6P38374 65 aa-0.02□□□□□ -2.41
UBX4YMR067C YIL102C-AQ2V2P5 75 aa-0.02□□□□□ -2.41
UBX4YMR067C SDH6Q3E785 79 aa-0.02□□□□□ -2.41
UBX4YMR067C NOP10Q6Q547 58 aaPredicted RBP-0.02□□□□□ -2.41
UBX4YMR067C YOL166W-AQ8TGJ1 51 aa-0.03□□□□□ -2.41
UBX4YMR067C YMR001C-AQ8TGS9 76 aa-0.03□□□□□ -2.41
UBX4YMR067C YNL198CP40166 100 aa-0.04□□□□□ -2.42
UBX4YMR067C LSM8P47093 109 aaKnown RBP-0.04□□□□□ -2.42
UBX4YMR067C SAE3P89114 91 aa-0.04□□□□□ -2.42
UBX4YMR067C YBR072C-AQ3E794 53 aa-0.04□□□□□ -2.42
UBX4YMR067C YDR182W-AQ3E796 67 aa-0.04□□□□□ -2.42
UBX4YMR067C RPS28AQ3E7X9 67 aaPredicted RBP-0.04□□□□□ -2.42
UBX4YMR067C RPS28BP0C0X0 67 aaKnown RBP-0.05□□□□□ -2.42
UBX4YMR067C QCR10P37299 77 aa-0.06□□□□□ -2.42
UBX4YMR067C ATX1P38636 73 aa-0.06□□□□□ -2.42
UBX4YMR067C YDR246W-AQ3E763 66 aa-0.06□□□□□ -2.42
UBX4YMR067C YCR095W-AQ3E787 52 aa-0.08□□□□□ -2.42
UBX4YMR067C YPL038W-AQ3E7B4 63 aa-0.08□□□□□ -2.42
UBX4YMR067C SOM1Q05676 74 aa-0.09□□□□□ -2.42
UBX4YMR067C YOL164W-AQ3E7A5 60 aa-0.09□□□□□ -2.42
UBX4YMR067C TOM6P33448 61 aa-0.1□□□□□ -2.43
UBX4YMR067C RUB1Q03919 77 aa-0.1□□□□□ -2.43
UBX4YMR067C YGL014C-AP0C5N1 53 aa-0.11□□□□□ -2.43
UBX4YMR067C YNL277W-AQ3E7Z0 62 aa-0.12□□□□□ -2.43
UBX4YMR067C SLO1Q3E784 85 aa-0.13□□□□□ -2.43
UBX4YMR067C YIR021W-AQ3E739 70 aa-0.16□□□□□ -2.44
UBX4YMR067C YOR376W-AQ3E805 51 aa-0.23□□□□□ -2.45
Retrieved 63 of 5,963 RNA–protein pairs in 29.6 ms