RNA–Protein interactions for RNA: YLR229C

CDC42, Transcript of Small rho-like GTPase, yeastyeast

Gene CDC42, Length 576 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC42YLR229C YOL097W-AQ3E7Y9 61 aa2.9□□□□□ -1.95
CDC42YLR229C YBR027CP38220 110 aa2.89□□□□□ -1.95
CDC42YLR229C YJR085CP47131 105 aaKnown RBP2.89□□□□□ -1.95
CDC42YLR229C SPG1P50088 95 aa2.89□□□□□ -1.95
CDC42YLR229C YDR034C-AP0C289 58 aa2.88□□□□□ -1.95
CDC42YLR229C YJL197C-AP0C5P0 93 aa2.88□□□□□ -1.95
CDC42YLR229C GIS2P53849 153 aaKnown RBP RIP-Chip data2.88□□□□□ -1.95not detected
CDC42YLR229C YPR195CQ06594 109 aa2.88□□□□□ -1.95
CDC42YLR229C ATP17Q06405 101 aa2.87□□□□□ -1.95
CDC42YLR229C YML100W-AQ8TGT0 57 aa2.87□□□□□ -1.95
CDC42YLR229C YFR032C-BQ8TGU2 87 aa2.87□□□□□ -1.95
CDC42YLR229C UTP20P35194 2493 aaKnown RBP2.85□□□□□ -1.95
CDC42YLR229C DYN1P36022 4092 aa2.85□□□□□ -1.95
CDC42YLR229C YDR010CQ12426 110 aa2.85□□□□□ -1.95
CDC42YLR229C YGL149WP53116 101 aa2.83□□□□□ -1.96
CDC42YLR229C YDL012CQ12489 107 aa2.82□□□□□ -1.96
CDC42YLR229C YBR201C-AQ2V2Q3 67 aa2.82□□□□□ -1.96
CDC42YLR229C YOR376W-AQ3E805 51 aa2.82□□□□□ -1.96
CDC42YLR229C YHR073W-AP0C5N7 58 aa2.81□□□□□ -1.96
CDC42YLR229C YNL122CP53921 115 aaPredicted RBP2.81□□□□□ -1.96
CDC42YLR229C COX8P04039 78 aa2.8□□□□□ -1.96
CDC42YLR229C LCL2Q08045 131 aa2.8□□□□□ -1.96
CDC42YLR229C YGR146C-AQ8TGT9 53 aa2.8□□□□□ -1.96
CDC42YLR229C LCL1Q02786 101 aa2.79□□□□□ -1.96
CDC42YLR229C YIL156W-BQ2V2P4 73 aa2.79□□□□□ -1.96
CDC42YLR229C MRX7P53869 86 aa2.78□□□□□ -1.96
CDC42YLR229C YLR255CO13574 117 aa2.77□□□□□ -1.97
CDC42YLR229C YJR128WP47162 119 aa2.77□□□□□ -1.97
CDC42YLR229C OLI1P61829 76 aa2.76□□□□□ -1.97
CDC42YLR229C YBL008W-AQ3E821 79 aa2.76□□□□□ -1.97
CDC42YLR229C YGL034CP53186 121 aa2.75□□□□□ -1.97
CDC42YLR229C YOR316C-AQ3E806 69 aa2.74□□□□□ -1.97
CDC42YLR229C DDR48P18899 430 aaKnown RBP2.73□□□□□ -1.97
CDC42YLR229C COX7P10174 60 aa2.71□□□□□ -1.98
CDC42YLR229C QCR10P37299 77 aa2.71□□□□□ -1.98
CDC42YLR229C YGL014C-AP0C5N1 53 aa2.7□□□□□ -1.98
CDC42YLR229C RPL37BP51402 88 aaKnown RBP2.67□□□□□ -1.98
CDC42YLR229C FYV12Q08559 129 aa2.67□□□□□ -1.98
CDC42YLR229C YBR016WP38216 128 aa2.66□□□□□ -1.98
CDC42YLR229C YEL014CP39999 101 aa2.65□□□□□ -1.99
CDC42YLR229C SOM1Q05676 74 aa2.64□□□□□ -1.99
CDC42YLR229C YBL044WP38194 122 aa2.58□□□□□ -2
CDC42YLR229C YOR394C-AQ8TGJ0 55 aa2.58□□□□□ -2
CDC42YLR229C YAL067W-AQ8TGK6 75 aa2.58□□□□□ -2
CDC42YLR229C YJL144WP47009 104 aa2.57□□□□□ -2
CDC42YLR229C YCR108CQ3E819 63 aa2.53□□□□□ -2
CDC42YLR229C YOR072W-BQ3E832 53 aa2.47□□□□□ -2.01
CDC42YLR229C CMC4Q3E7A9 73 aa2.46□□□□□ -2.02
CDC42YLR229C YML054C-AQ3E809 52 aa2.46□□□□□ -2.02
CDC42YLR229C YDR210WQ03482 75 aa2.45□□□□□ -2.02
CDC42YLR229C YBR072C-AQ3E794 53 aa2.45□□□□□ -2.02
CDC42YLR229C MDN1Q12019 4910 aaKnown RBP2.45□□□□□ -2.02
CDC42YLR229C RPL37AP49166 88 aaKnown RBP2.44□□□□□ -2.02
CDC42YLR229C Q0017Q9ZZX8 53 aa2.43□□□□□ -2.02
CDC42YLR229C HHY1P39982 102 aa2.39□□□□□ -2.03
CDC42YLR229C YJL009WP47078 108 aa2.38□□□□□ -2.03
CDC42YLR229C YHR032W-AP0C5N6 59 aa2.12□□□□□ -2.07
CDC42YLR229C YHR050W-AQ05451 56 aa1.99□□□□□ -2.09
CDC42YLR229C YHR086W-AQ3E746 53 aa1.97□□□□□ -2.09
CDC42YLR229C YOL164W-AQ3E7A5 60 aa1.95□□□□□ -2.1
CDC42YLR229C RPS29BP41058 56 aaKnown RBP1.86□□□□□ -2.11
CDC42YLR229C RPS29AP41057 56 aaKnown RBP1.79□□□□□ -2.12
CDC42YLR229C YLR157W-EP0CF00 54 aa1.72□□□□□ -2.13
Retrieved 63 of 5,963 RNA–protein pairs in 109.4 ms