RNA–Protein interactions for RNA: YLR221C

RSA3, Transcript of Protein with a likely role in ribosomal maturation, yeast

Gene RSA3, Length 663 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA3	YLR221C	RPS30A	P0CX33	63 aa	Known RBP	0.64	□□□□□ -2.31
RSA3	YLR221C	RPS30B	P0CX34	63 aa	Known RBP	0.64	□□□□□ -2.31
RSA3	YLR221C	EDC1	P53080	175 aa	Predicted RBP	0.64	□□□□□ -2.31
RSA3	YLR221C	YPR108W-A	Q3E7B3	70 aa		0.64	□□□□□ -2.31
RSA3	YLR221C	MEC1	P38111	2368 aa		0.63	□□□□□ -2.31
RSA3	YLR221C	YBR056W-A	I2HB52	66 aa		0.63	□□□□□ -2.31
RSA3	YLR221C	YBR032W	P38223	100 aa		0.63	□□□□□ -2.31
RSA3	YLR221C	YKL023C-A	Q2V2P3	75 aa		0.63	□□□□□ -2.31
RSA3	YLR221C	HUB1	Q6Q546	73 aa		0.63	□□□□□ -2.31
RSA3	YLR221C	IRA1	P18963	3092 aa		0.63	□□□□□ -2.31
RSA3	YLR221C	IRA2	P19158	3079 aa		0.63	□□□□□ -2.31
RSA3	YLR221C	YBR200W-A	Q3E755	54 aa		0.62	□□□□□ -2.31
RSA3	YLR221C	YBL039W-B	P0C268	59 aa		0.61	□□□□□ -2.31
RSA3	YLR221C	YOR011W-A	Q3E807	68 aa		0.61	□□□□□ -2.31
RSA3	YLR221C	MDN1	Q12019	4910 aa	Known RBP	0.6	□□□□□ -2.31
RSA3	YLR221C	TRA1	P38811	3744 aa		0.59	□□□□□ -2.31
RSA3	YLR221C	RPS27A	P35997	82 aa	Known RBP	0.59	□□□□□ -2.31
RSA3	YLR221C	YLR146W-A	Q2V2P1	62 aa		0.59	□□□□□ -2.31
RSA3	YLR221C	YOR192C-C	Q3E736	78 aa		0.59	□□□□□ -2.31
RSA3	YLR221C	DYN1	P36022	4092 aa		0.58	□□□□□ -2.32
RSA3	YLR221C	YOR394C-A	Q8TGJ0	55 aa		0.58	□□□□□ -2.32
RSA3	YLR221C	HKR1	P41809	1802 aa		0.58	□□□□□ -2.32
RSA3	YLR221C	YIL046W-A	Q3E7Z4	54 aa		0.57	□□□□□ -2.32
RSA3	YLR221C	YMR001C-A	Q8TGS9	76 aa		0.57	□□□□□ -2.32
RSA3	YLR221C	YLR157W-D	P0CE99	70 aa		0.55	□□□□□ -2.32
RSA3	YLR221C	CSF1	Q12150	2958 aa		0.55	□□□□□ -2.32
RSA3	YLR221C	YBL044W	P38194	122 aa		0.54	□□□□□ -2.32
RSA3	YLR221C	YGR025W	P53216	100 aa		0.53	□□□□□ -2.32
RSA3	YLR221C	RPS27B	P38711	82 aa		0.52	□□□□□ -2.33
RSA3	YLR221C	OLI1	P61829	76 aa		0.52	□□□□□ -2.33
RSA3	YLR221C	YBR230W-A	Q3E762	66 aa		0.51	□□□□□ -2.33
RSA3	YLR221C	YCR108C	Q3E819	63 aa		0.48	□□□□□ -2.33
RSA3	YLR221C	YPR010C-A	A5Z2X5	72 aa		0.47	□□□□□ -2.33
RSA3	YLR221C	SIP18	P50263	79 aa		0.46	□□□□□ -2.34
RSA3	YLR221C	YGR146C-A	Q8TGT9	53 aa		0.46	□□□□□ -2.34
RSA3	YLR221C	Q0297	Q9ZZV8	51 aa		0.46	□□□□□ -2.34
RSA3	YLR221C	TOS6	P48560	102 aa		0.45	□□□□□ -2.34
RSA3	YLR221C	YOR008C-A	Q3E7B9	74 aa		0.44	□□□□□ -2.34
RSA3	YLR221C	SMX2	P40204	77 aa	Known RBP	0.43	□□□□□ -2.34
RSA3	YLR221C	RPS29A	P41057	56 aa	Known RBP	0.36	□□□□□ -2.35
RSA3	YLR221C	YLL006W-A	Q3E814	58 aa		0.36	□□□□□ -2.35
RSA3	YLR221C	YLR342W-A	Q3E810	57 aa		0.34	□□□□□ -2.36
RSA3	YLR221C	YJL133C-A	Q3E7A3	74 aa		0.33	□□□□□ -2.36
RSA3	YLR221C	COA2	Q3E823	68 aa		0.33	□□□□□ -2.36
RSA3	YLR221C	YOR072W-B	Q3E832	53 aa		0.33	□□□□□ -2.36
RSA3	YLR221C	YGL258W-A	Q3E740	77 aa		0.32	□□□□□ -2.36
RSA3	YLR221C	YOR316C-A	Q3E806	69 aa		0.32	□□□□□ -2.36
RSA3	YLR221C	COX9	P07255	59 aa		0.31	□□□□□ -2.36
RSA3	YLR221C	DDR2	P89113	61 aa		0.31	□□□□□ -2.36
RSA3	YLR221C	RPL39	P04650	51 aa		0.3	□□□□□ -2.36
RSA3	YLR221C	HOR7	Q05827	59 aa		0.27	□□□□□ -2.37
RSA3	YLR221C	RPL29	P05747	59 aa	Predicted RBP	0.25	□□□□□ -2.37
RSA3	YLR221C	YDR034C-A	P0C289	58 aa		0.25	□□□□□ -2.37
RSA3	YLR221C	NCE101	Q02820	53 aa		0.25	□□□□□ -2.37
RSA3	YLR221C	YHR073W-A	P0C5N7	58 aa		0.23	□□□□□ -2.37
RSA3	YLR221C	TOM7	P53507	60 aa		0.23	□□□□□ -2.37
RSA3	YLR221C	YJL127C-B	Q3E828	52 aa		0.23	□□□□□ -2.37
RSA3	YLR221C	YMR105W-A	Q8TGS8	64 aa		0.23	□□□□□ -2.37
RSA3	YLR221C	YHR050W-A	Q05451	56 aa		0.2	□□□□□ -2.38
RSA3	YLR221C	YLL066W-B	Q8TGJ7	56 aa		0.16	□□□□□ -2.38
RSA3	YLR221C	Q0017	Q9ZZX8	53 aa		0.15	□□□□□ -2.39
RSA3	YLR221C	YML054C-A	Q3E809	52 aa		0.13	□□□□□ -2.39
RSA3	YLR221C	PMP3	P87284	55 aa		0.1	□□□□□ -2.39

Retrieved 63 of 5,963 RNA–protein pairs in 10.5 ms