RNA–Protein interactions for RNA: YLL016W

SDC25, Transcript of Non-essential Ras guanine nucleotide exchange factor (GEF), yeastyeast

Gene SDC25, Length 3,147 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDC25YLL016W YLR342W-AQ3E810 57 aa1.14□□□□□ -2.23
SDC25YLL016W YOR034C-AQ3E735 80 aa1.13□□□□□ -2.23
SDC25YLL016W YBR200W-AQ3E755 54 aa1.13□□□□□ -2.23
SDC25YLL016W YHR173CP38864 112 aa1.13□□□□□ -2.23
SDC25YLL016W RPC10P40422 70 aa1.12□□□□□ -2.23
SDC25YLL016W YBR072C-AQ3E794 53 aa1.12□□□□□ -2.23
SDC25YLL016W COX7P10174 60 aa1.11□□□□□ -2.23
SDC25YLL016W RPL37AP49166 88 aaKnown RBP1.11□□□□□ -2.23
SDC25YLL016W VMA9Q3E7B6 73 aa1.11□□□□□ -2.23
SDC25YLL016W RPL37BP51402 88 aaKnown RBP1.1□□□□□ -2.23
SDC25YLL016W YBR201C-AQ2V2Q3 67 aa1.1□□□□□ -2.23
SDC25YLL016W Q0032Q9ZZX7 96 aa1.1□□□□□ -2.23
SDC25YLL016W COA2Q3E823 68 aa1.1□□□□□ -2.23
SDC25YLL016W YDL022C-AP0C5L6 82 aa1.09□□□□□ -2.23
SDC25YLL016W SSS1P35179 80 aa1.09□□□□□ -2.24
SDC25YLL016W YOL097W-AQ3E7Y9 61 aa1.09□□□□□ -2.24
SDC25YLL016W ATP18P81450 59 aa1.09□□□□□ -2.24
SDC25YLL016W RPS29AP41057 56 aaKnown RBP1.08□□□□□ -2.24
SDC25YLL016W YNL198CP40166 100 aa1.06□□□□□ -2.24
SDC25YLL016W YLR146W-AQ2V2P1 62 aa1.06□□□□□ -2.24
SDC25YLL016W YDR246W-AQ3E763 66 aa1.06□□□□□ -2.24
SDC25YLL016W RPL38P49167 78 aaKnown RBP1.05□□□□□ -2.24
SDC25YLL016W ATP17Q06405 101 aa1.05□□□□□ -2.24
SDC25YLL016W PAU7P39545 55 aa1.05□□□□□ -2.24
SDC25YLL016W TOS6P48560 102 aa1.05□□□□□ -2.24
SDC25YLL016W RPS29BP41058 56 aaKnown RBP1.04□□□□□ -2.24
SDC25YLL016W YIL102C-AQ2V2P5 75 aa1.03□□□□□ -2.24
SDC25YLL016W YDR182W-AQ3E796 67 aa1.03□□□□□ -2.24
SDC25YLL016W RPL29P05747 59 aaPredicted RBP1.02□□□□□ -2.25
SDC25YLL016W YBL039W-BP0C268 59 aa1.02□□□□□ -2.25
SDC25YLL016W YSY6P38374 65 aa1.02□□□□□ -2.25
SDC25YLL016W YNL190WP53872 204 aa1.02□□□□□ -2.25
SDC25YLL016W SDH6Q3E785 79 aa1.02□□□□□ -2.25
SDC25YLL016W Q0017Q9ZZX8 53 aa1.02□□□□□ -2.25
SDC25YLL016W YLR157W-EP0CF00 54 aa1.01□□□□□ -2.25
SDC25YLL016W EDC1P53080 175 aaPredicted RBP1□□□□□ -2.25
SDC25YLL016W HUB1Q6Q546 73 aa0.98□□□□□ -2.25
SDC25YLL016W DDR2P89113 61 aa0.98□□□□□ -2.25
SDC25YLL016W YIL134C-AQ45U18 67 aa0.98□□□□□ -2.25
SDC25YLL016W YOR008C-AQ3E7B9 74 aa0.97□□□□□ -2.25
SDC25YLL016W YJR107C-AP0CT86 78 aa0.95□□□□□ -2.26
SDC25YLL016W RPS30AP0CX33 63 aaKnown RBP0.93□□□□□ -2.26
SDC25YLL016W RPS30BP0CX34 63 aaKnown RBP0.93□□□□□ -2.26
SDC25YLL016W YOL166W-AQ8TGJ1 51 aa0.93□□□□□ -2.26
SDC25YLL016W YOL164W-AQ3E7A5 60 aa0.93□□□□□ -2.26
SDC25YLL016W YBR016WP38216 128 aa0.92□□□□□ -2.26
SDC25YLL016W YLL006W-AQ3E814 58 aa0.91□□□□□ -2.26
SDC25YLL016W YBR230W-AQ3E762 66 aa0.91□□□□□ -2.26
SDC25YLL016W YHR073W-AP0C5N7 58 aa0.91□□□□□ -2.26
SDC25YLL016W YLR157W-DP0CE99 70 aa0.91□□□□□ -2.26
SDC25YLL016W YJL127C-BQ3E828 52 aa0.9□□□□□ -2.27
SDC25YLL016W YOR394C-AQ8TGJ0 55 aa0.88□□□□□ -2.27
SDC25YLL016W YFR009W-AP0C5M9 85 aa0.86□□□□□ -2.27
SDC25YLL016W YMR001C-AQ8TGS9 76 aa0.85□□□□□ -2.27
SDC25YLL016W OLI1P61829 76 aa0.84□□□□□ -2.27
SDC25YLL016W YBL044WP38194 122 aa0.84□□□□□ -2.27
SDC25YLL016W YML054C-AQ3E809 52 aa0.84□□□□□ -2.28
SDC25YLL016W YOR316C-AQ3E806 69 aa0.82□□□□□ -2.28
SDC25YLL016W YGR146C-AQ8TGT9 53 aa0.8□□□□□ -2.28
SDC25YLL016W YJL133C-AQ3E7A3 74 aa0.78□□□□□ -2.28
SDC25YLL016W YOR072W-BQ3E832 53 aa0.69□□□□□ -2.3
SDC25YLL016W YCR108CQ3E819 63 aa0.68□□□□□ -2.3
SDC25YLL016W YHR050W-AQ05451 56 aa0.6□□□□□ -2.31
Retrieved 63 of 5,963 RNA–protein pairs in 39.4 ms