RNA–Protein interactions for RNA: YLL011W

SOF1, Transcript of Protein required for biogenesis of 40S (small) ribosomal subunit, yeastyeast

Gene SOF1, Length 1,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOF1YLL011W QCR9P22289 66 aa1.89□□□□□ -2.11
SOF1YLL011W ERI1P62651 68 aaKnown RBP1.88□□□□□ -2.11
SOF1YLL011W YBR200W-AQ3E755 54 aa1.88□□□□□ -2.11
SOF1YLL011W YBR072C-AQ3E794 53 aa1.88□□□□□ -2.11
SOF1YLL011W YLR307C-AQ3E825 87 aa1.88□□□□□ -2.11
SOF1YLL011W ATX1P38636 73 aa1.88□□□□□ -2.11
SOF1YLL011W YLR342W-AQ3E810 57 aa1.87□□□□□ -2.11
SOF1YLL011W YDL022C-AP0C5L6 82 aa1.84□□□□□ -2.11
SOF1YLL011W PMP3P87284 55 aa1.84□□□□□ -2.11
SOF1YLL011W COX7P10174 60 aa1.83□□□□□ -2.12
SOF1YLL011W SSS1P35179 80 aa1.83□□□□□ -2.12
SOF1YLL011W YFL041W-AQ3E817 63 aa1.83□□□□□ -2.12
SOF1YLL011W ATP18P81450 59 aa1.82□□□□□ -2.12
SOF1YLL011W YLR157W-EP0CF00 54 aa1.79□□□□□ -2.12
SOF1YLL011W RPC10P40422 70 aa1.79□□□□□ -2.12
SOF1YLL011W YNL198CP40166 100 aa1.78□□□□□ -2.12
SOF1YLL011W RPL37BP51402 88 aaKnown RBP1.77□□□□□ -2.13
SOF1YLL011W RPL38P49167 78 aaKnown RBP1.76□□□□□ -2.13
SOF1YLL011W YNL190WP53872 204 aa1.74□□□□□ -2.13
SOF1YLL011W YOL097W-AQ3E7Y9 61 aa1.74□□□□□ -2.13
SOF1YLL011W PAU7P39545 55 aa1.73□□□□□ -2.13
SOF1YLL011W YIL134C-AQ45U18 67 aa1.73□□□□□ -2.13
SOF1YLL011W SDH6Q3E785 79 aa1.72□□□□□ -2.13
SOF1YLL011W VMA9Q3E7B6 73 aa1.72□□□□□ -2.13
SOF1YLL011W ATP17Q06405 101 aa1.69□□□□□ -2.14
SOF1YLL011W YIL102C-AQ2V2P5 75 aa1.69□□□□□ -2.14
SOF1YLL011W YDR246W-AQ3E763 66 aa1.69□□□□□ -2.14
SOF1YLL011W YOR008C-AQ3E7B9 74 aa1.69□□□□□ -2.14
SOF1YLL011W YJR107C-AP0CT86 78 aa1.68□□□□□ -2.14
SOF1YLL011W YSY6P38374 65 aa1.67□□□□□ -2.14
SOF1YLL011W TOS6P48560 102 aa1.67□□□□□ -2.14
SOF1YLL011W YBL039W-BP0C268 59 aa1.66□□□□□ -2.14
SOF1YLL011W YOL164W-AQ3E7A5 60 aa1.66□□□□□ -2.14
SOF1YLL011W YKL023C-AQ2V2P3 75 aa1.63□□□□□ -2.15
SOF1YLL011W DDR2P89113 61 aa1.62□□□□□ -2.15
SOF1YLL011W RPL29P05747 59 aaPredicted RBP1.6□□□□□ -2.15
SOF1YLL011W YLL006W-AQ3E814 58 aa1.59□□□□□ -2.15
SOF1YLL011W RPS30AP0CX33 63 aaKnown RBP1.57□□□□□ -2.16
SOF1YLL011W RPS30BP0CX34 63 aaKnown RBP1.57□□□□□ -2.16
SOF1YLL011W EDC1P53080 175 aaPredicted RBP1.57□□□□□ -2.16
SOF1YLL011W YDR182W-AQ3E796 67 aa1.56□□□□□ -2.16
SOF1YLL011W YBR230W-AQ3E762 66 aa1.55□□□□□ -2.16
SOF1YLL011W YJL127C-BQ3E828 52 aa1.55□□□□□ -2.16
SOF1YLL011W HUB1Q6Q546 73 aa1.54□□□□□ -2.16
SOF1YLL011W YBR016WP38216 128 aa1.53□□□□□ -2.16
SOF1YLL011W YOL166W-AQ8TGJ1 51 aa1.5□□□□□ -2.17
SOF1YLL011W YFR009W-AP0C5M9 85 aa1.5□□□□□ -2.17
SOF1YLL011W Q0017Q9ZZX8 53 aa1.48□□□□□ -2.17
SOF1YLL011W YLR157W-DP0CE99 70 aa1.47□□□□□ -2.17
SOF1YLL011W RPS29AP41057 56 aaKnown RBP1.44□□□□□ -2.18
SOF1YLL011W RPS29BP41058 56 aaKnown RBP1.43□□□□□ -2.18
SOF1YLL011W YOR394C-AQ8TGJ0 55 aa1.42□□□□□ -2.18
SOF1YLL011W YMR001C-AQ8TGS9 76 aa1.42□□□□□ -2.18
SOF1YLL011W YBL044WP38194 122 aa1.37□□□□□ -2.19
SOF1YLL011W OLI1P61829 76 aa1.37□□□□□ -2.19
SOF1YLL011W YHR073W-AP0C5N7 58 aa1.37□□□□□ -2.19
SOF1YLL011W YJL133C-AQ3E7A3 74 aa1.36□□□□□ -2.19
SOF1YLL011W YOR316C-AQ3E806 69 aa1.31□□□□□ -2.2
SOF1YLL011W YML054C-AQ3E809 52 aa1.28□□□□□ -2.2
SOF1YLL011W YCR108CQ3E819 63 aa1.18□□□□□ -2.22
SOF1YLL011W YGR146C-AQ8TGT9 53 aa1.18□□□□□ -2.22
SOF1YLL011W YOR072W-BQ3E832 53 aa0.94□□□□□ -2.26
SOF1YLL011W YHR050W-AQ05451 56 aa0.79□□□□□ -2.28
Retrieved 63 of 5,963 RNA–protein pairs in 7.1 ms