RNA–Protein interactions for RNA: YKR081C

RPF2, Transcript of Essential protein involved in rRNA maturation and ribosomal assembly, yeastyeast

Gene RPF2, Length 1,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF2YKR081C HFA1P32874 2273 aa0.9□□□□□ -2.27
RPF2YKR081C URA2P07259 2214 aaKnown RBP0.89□□□□□ -2.27
RPF2YKR081C SEN1Q00416 2231 aaKnown RBP0.89□□□□□ -2.27
RPF2YKR081C AUA1P32450 94 aa0.89□□□□□ -2.27
RPF2YKR081C POL2P21951 2222 aaKnown RBP0.88□□□□□ -2.27
RPF2YKR081C RPC10P40422 70 aa0.88□□□□□ -2.27
RPF2YKR081C YIL086CP40503 102 aa0.88□□□□□ -2.27
RPF2YKR081C YLR342W-AQ3E810 57 aa0.88□□□□□ -2.27
RPF2YKR081C RPS27AP35997 82 aaKnown RBP0.87□□□□□ -2.27
RPF2YKR081C YOR011W-AQ3E807 68 aa0.87□□□□□ -2.27
RPF2YKR081C YLL006W-AQ3E814 58 aa0.87□□□□□ -2.27
RPF2YKR081C YOR394C-AQ8TGJ0 55 aa0.87□□□□□ -2.27
RPF2YKR081C DYN1P36022 4092 aa0.87□□□□□ -2.27
RPF2YKR081C YJL133C-AQ3E7A3 74 aa0.86□□□□□ -2.27
RPF2YKR081C YCR108CQ3E819 63 aa0.86□□□□□ -2.27
RPF2YKR081C YHR213W-BQ8TGK1 99 aa0.86□□□□□ -2.27
RPF2YKR081C SEC16P48415 2195 aaKnown RBP0.86□□□□□ -2.27
RPF2YKR081C MEC1P38111 2368 aa0.85□□□□□ -2.27
RPF2YKR081C FLO1P32768 1537 aa0.85□□□□□ -2.27
RPF2YKR081C RPS27BP38711 82 aa0.85□□□□□ -2.27
RPF2YKR081C YGL258W-AQ3E740 77 aa0.85□□□□□ -2.27
RPF2YKR081C YOL097W-AQ3E7Y9 61 aa0.85□□□□□ -2.27
RPF2YKR081C CSF1Q12150 2958 aa0.85□□□□□ -2.27
RPF2YKR081C COX7P10174 60 aa0.84□□□□□ -2.27
RPF2YKR081C YDR034W-BQ6Q5X2 51 aa0.84□□□□□ -2.27
RPF2YKR081C CUP1-1P0CX80 61 aa0.83□□□□□ -2.28
RPF2YKR081C CUP1-2P0CX81 61 aa0.83□□□□□ -2.28
RPF2YKR081C YAR064WP39563 99 aa0.83□□□□□ -2.28
RPF2YKR081C SIP18P50263 79 aa0.83□□□□□ -2.28
RPF2YKR081C YBL044WP38194 122 aa0.81□□□□□ -2.28
RPF2YKR081C MDN1Q12019 4910 aaKnown RBP0.8□□□□□ -2.28
RPF2YKR081C YBR016WP38216 128 aa0.8□□□□□ -2.28
RPF2YKR081C YJL009WP47078 108 aa0.8□□□□□ -2.28
RPF2YKR081C YBR230W-AQ3E762 66 aa0.8□□□□□ -2.28
RPF2YKR081C NCE101Q02820 53 aa0.79□□□□□ -2.28
RPF2YKR081C YJL127C-BQ3E828 52 aa0.79□□□□□ -2.28
RPF2YKR081C YGR146C-AQ8TGT9 53 aa0.79□□□□□ -2.28
RPF2YKR081C RPL29P05747 59 aaPredicted RBP0.78□□□□□ -2.28
RPF2YKR081C HHY1P39982 102 aa0.78□□□□□ -2.28
RPF2YKR081C OLI1P61829 76 aa0.78□□□□□ -2.28
RPF2YKR081C DDR2P89113 61 aa0.78□□□□□ -2.28
RPF2YKR081C YLR307C-AQ3E825 87 aa0.77□□□□□ -2.29
RPF2YKR081C YMR105W-AQ8TGS8 64 aa0.75□□□□□ -2.29
RPF2YKR081C PMP3P87284 55 aa0.74□□□□□ -2.29
RPF2YKR081C YBR072C-AQ3E794 53 aa0.74□□□□□ -2.29
RPF2YKR081C YOL164W-AQ3E7A5 60 aa0.74□□□□□ -2.29
RPF2YKR081C RPL39P04650 51 aa0.72□□□□□ -2.29
RPF2YKR081C YOR316C-AQ3E806 69 aa0.72□□□□□ -2.29
RPF2YKR081C YBR056W-AI2HB52 66 aa0.7□□□□□ -2.3
RPF2YKR081C YHR073W-AP0C5N7 58 aa0.68□□□□□ -2.3
RPF2YKR081C HOR7Q05827 59 aa0.68□□□□□ -2.3
RPF2YKR081C YLR157W-EP0CF00 54 aa0.67□□□□□ -2.3
RPF2YKR081C YIL046W-AQ3E7Z4 54 aa0.67□□□□□ -2.3
RPF2YKR081C YDR034C-AP0C289 58 aa0.65□□□□□ -2.31
RPF2YKR081C YOR072W-BQ3E832 53 aa0.64□□□□□ -2.31
RPF2YKR081C YLL066W-BQ8TGJ7 56 aa0.63□□□□□ -2.31
RPF2YKR081C YDR524C-BQ3E6R4 66 aa0.59□□□□□ -2.31
RPF2YKR081C YML054C-AQ3E809 52 aa0.49□□□□□ -2.33
RPF2YKR081C RPS29BP41058 56 aaKnown RBP0.48□□□□□ -2.33
RPF2YKR081C Q0017Q9ZZX8 53 aa0.48□□□□□ -2.33
RPF2YKR081C RPS29AP41057 56 aaKnown RBP0.46□□□□□ -2.34
RPF2YKR081C YHR050W-AQ05451 56 aa0.46□□□□□ -2.34
RPF2YKR081C Q0297Q9ZZV8 51 aa0.44□□□□□ -2.34
Retrieved 63 of 5,963 RNA–protein pairs in 50.2 ms