RNA–Protein interactions for RNA: YKR036C

CAF4, Transcript of WD40 repeat-containing protein associated with the CCR4-NOT complex, yeastyeast

Gene CAF4, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF4YKR036C YHR007C-AQ07074 71 aa3.25□□□□□ -1.89
CAF4YKR036C LCL2Q08045 131 aa3.25□□□□□ -1.89
CAF4YKR036C YBR182C-AQ8TGU6 64 aa3.24□□□□□ -1.89
CAF4YKR036C GIS2P53849 153 aaKnown RBP RIP-Chip data3.23□□□□□ -1.89not detected
CAF4YKR036C YJL197C-AP0C5P0 93 aa3.23□□□□□ -1.89
CAF4YKR036C YNL122CP53921 115 aaPredicted RBP3.23□□□□□ -1.89
CAF4YKR036C YDR115WQ04598 105 aa3.22□□□□□ -1.89
CAF4YKR036C YOR072WQ08486 104 aa3.21□□□□□ -1.9
CAF4YKR036C YFR032C-BQ8TGU2 87 aa3.21□□□□□ -1.9
CAF4YKR036C SOM1Q05676 74 aa3.21□□□□□ -1.9
CAF4YKR036C Q0032Q9ZZX7 96 aa3.21□□□□□ -1.9
CAF4YKR036C SNA2P56508 79 aa3.2□□□□□ -1.9
CAF4YKR036C FYV12Q08559 129 aa3.2□□□□□ -1.9
CAF4YKR036C YLL066W-BQ8TGJ7 56 aa3.18□□□□□ -1.9
CAF4YKR036C YDL012CQ12489 107 aa3.17□□□□□ -1.9
CAF4YKR036C MRP10O75012 95 aa3.16□□□□□ -1.9
CAF4YKR036C YMR230W-AQ3E7B5 62 aa3.15□□□□□ -1.9
CAF4YKR036C YGL014C-AP0C5N1 53 aa3.14□□□□□ -1.91
CAF4YKR036C YJR128WP47162 119 aa3.13□□□□□ -1.91
CAF4YKR036C SGF11Q03067 99 aa3.13□□□□□ -1.91
CAF4YKR036C RTC6O14464 93 aa3.12□□□□□ -1.91
CAF4YKR036C YLR255CO13574 117 aa3.11□□□□□ -1.91
CAF4YKR036C YBL008W-AQ3E821 79 aa3.11□□□□□ -1.91
CAF4YKR036C YGL041C-BQ3E750 60 aa3.11□□□□□ -1.91
CAF4YKR036C YGR146C-AQ8TGT9 53 aa3.1□□□□□ -1.91
CAF4YKR036C YBR201C-AQ2V2Q3 67 aa3.09□□□□□ -1.91
CAF4YKR036C YOL097W-AQ3E7Y9 61 aa3.09□□□□□ -1.91
CAF4YKR036C YHR073W-AP0C5N7 58 aa3.03□□□□□ -1.92
CAF4YKR036C RPL37BP51402 88 aaKnown RBP3.03□□□□□ -1.92
CAF4YKR036C YDR210WQ03482 75 aa3.02□□□□□ -1.93
CAF4YKR036C YPR195CQ06594 109 aa3.02□□□□□ -1.93
CAF4YKR036C COX8P04039 78 aa3.01□□□□□ -1.93
CAF4YKR036C YOR316C-AQ3E806 69 aa3□□□□□ -1.93
CAF4YKR036C YEL014CP39999 101 aa2.99□□□□□ -1.93
CAF4YKR036C YJR085CP47131 105 aaKnown RBP2.97□□□□□ -1.93
CAF4YKR036C YOR394C-AQ8TGJ0 55 aa2.96□□□□□ -1.94
CAF4YKR036C YBR016WP38216 128 aa2.95□□□□□ -1.94
CAF4YKR036C OLI1P61829 76 aa2.94□□□□□ -1.94
CAF4YKR036C YCR108CQ3E819 63 aa2.94□□□□□ -1.94
CAF4YKR036C YJL144WP47009 104 aa2.91□□□□□ -1.94
CAF4YKR036C YDR034C-AP0C289 58 aa2.89□□□□□ -1.95
CAF4YKR036C CMC4Q3E7A9 73 aa2.88□□□□□ -1.95
CAF4YKR036C YER078W-AQ3E7A2 54 aa2.87□□□□□ -1.95
CAF4YKR036C YBL044WP38194 122 aa2.86□□□□□ -1.95
CAF4YKR036C YFL067WP43537 175 aa2.86□□□□□ -1.95
CAF4YKR036C LCL1Q02786 101 aa2.83□□□□□ -1.96
CAF4YKR036C COX7P10174 60 aa2.78□□□□□ -1.96
CAF4YKR036C YER175W-AQ8TGU4 54 aa2.73□□□□□ -1.97
CAF4YKR036C RPL37AP49166 88 aaKnown RBP2.71□□□□□ -1.98
CAF4YKR036C YHR032W-AP0C5N6 59 aa2.69□□□□□ -1.98
CAF4YKR036C YBR072C-AQ3E794 53 aa2.65□□□□□ -1.99
CAF4YKR036C HHY1P39982 102 aa2.62□□□□□ -1.99
CAF4YKR036C YOR072W-BQ3E832 53 aa2.59□□□□□ -1.99
CAF4YKR036C YJL009WP47078 108 aa2.56□□□□□ -2
CAF4YKR036C YML054C-AQ3E809 52 aa2.45□□□□□ -2.02
CAF4YKR036C YAL067W-AQ8TGK6 75 aa2.45□□□□□ -2.02
CAF4YKR036C Q0017Q9ZZX8 53 aa2.38□□□□□ -2.03
CAF4YKR036C YOL164W-AQ3E7A5 60 aa2.25□□□□□ -2.05
CAF4YKR036C RPS29AP41057 56 aaKnown RBP2.06□□□□□ -2.08
CAF4YKR036C RPS29BP41058 56 aaKnown RBP2.06□□□□□ -2.08
CAF4YKR036C YHR050W-AQ05451 56 aa2.03□□□□□ -2.08
CAF4YKR036C YHR086W-AQ3E746 53 aa1.97□□□□□ -2.09
CAF4YKR036C YLR157W-EP0CF00 54 aa1.89□□□□□ -2.11
Retrieved 63 of 5,963 RNA–protein pairs in 36 ms