RNA–Protein interactions for RNA: YKL139W

CTK1, Transcript of Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK1, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK1YKL139W LSM2P38203 95 aaKnown RBP0.49□□□□□ -2.33
CTK1YKL139W YKL018C-AQ3E7A7 99 aa0.49□□□□□ -2.33
CTK1YKL139W PAU7P39545 55 aa0.45□□□□□ -2.34
CTK1YKL139W YLR146W-AQ2V2P1 62 aa0.44□□□□□ -2.34
CTK1YKL139W RPS27AP35997 82 aaKnown RBP0.41□□□□□ -2.34
CTK1YKL139W YDR246W-AQ3E763 66 aa0.41□□□□□ -2.34
CTK1YKL139W YBR200W-AQ3E755 54 aa0.4□□□□□ -2.35
CTK1YKL139W SPI1P40092 148 aa0.37□□□□□ -2.35
CTK1YKL139W ERI1P62651 68 aaKnown RBP0.37□□□□□ -2.35
CTK1YKL139W PAI3P01094 68 aa0.36□□□□□ -2.35
CTK1YKL139W SSS1P35179 80 aa0.36□□□□□ -2.35
CTK1YKL139W YFL041W-AQ3E817 63 aa0.36□□□□□ -2.35
CTK1YKL139W OLI1P61829 76 aa0.35□□□□□ -2.35
CTK1YKL139W YOR011W-AQ3E807 68 aa0.35□□□□□ -2.35
CTK1YKL139W YOR394C-AQ8TGJ0 55 aa0.35□□□□□ -2.35
CTK1YKL139W YBL039W-BP0C268 59 aa0.34□□□□□ -2.36
CTK1YKL139W HUB1Q6Q546 73 aa0.28□□□□□ -2.36
CTK1YKL139W RPS29AP41057 56 aaKnown RBP0.28□□□□□ -2.37
CTK1YKL139W Q0297Q9ZZV8 51 aa0.27□□□□□ -2.37
CTK1YKL139W SIP18P50263 79 aa0.25□□□□□ -2.37
CTK1YKL139W YDR182W-AQ3E796 67 aa0.25□□□□□ -2.37
CTK1YKL139W YOR008C-AQ3E7B9 74 aa0.21□□□□□ -2.38
CTK1YKL139W RPS30AP0CX33 63 aaKnown RBP0.2□□□□□ -2.38
CTK1YKL139W RPS30BP0CX34 63 aaKnown RBP0.2□□□□□ -2.38
CTK1YKL139W YSY6P38374 65 aa0.19□□□□□ -2.38
CTK1YKL139W YMR001C-AQ8TGS9 76 aa0.19□□□□□ -2.38
CTK1YKL139W TOS6P48560 102 aa0.15□□□□□ -2.39
CTK1YKL139W YOL131WQ08270 108 aa0.12□□□□□ -2.39
CTK1YKL139W YIL102C-AQ2V2P5 75 aa0.12□□□□□ -2.39
CTK1YKL139W RPS27BP38711 82 aa0.09□□□□□ -2.4
CTK1YKL139W YOL166W-AQ8TGJ1 51 aa0.06□□□□□ -2.4
CTK1YKL139W YLR157W-DP0CE99 70 aa0.02□□□□□ -2.41
CTK1YKL139W YBR230W-AQ3E762 66 aa0.02□□□□□ -2.41
CTK1YKL139W YGR146C-AQ8TGT9 53 aa-0.05□□□□□ -2.42
CTK1YKL139W VMA9Q3E7B6 73 aa-0.08□□□□□ -2.42
CTK1YKL139W YFR010W-AP0C5N0 62 aa-0.11□□□□□ -2.43
CTK1YKL139W YLL006W-AQ3E814 58 aa-0.16□□□□□ -2.44
CTK1YKL139W COA2Q3E823 68 aa-0.19□□□□□ -2.44
CTK1YKL139W YOR192C-CQ3E736 78 aa-0.21□□□□□ -2.44
CTK1YKL139W YGL258W-AQ3E740 77 aa-0.25□□□□□ -2.45
CTK1YKL139W YKL023C-AQ2V2P3 75 aa-0.28□□□□□ -2.45
CTK1YKL139W YOR072W-BQ3E832 53 aa-0.32□□□□□ -2.46
CTK1YKL139W YDR034C-AP0C289 58 aa-0.39□□□□□ -2.47
CTK1YKL139W HOR7Q05827 59 aa-0.41□□□□□ -2.48
CTK1YKL139W YPR010C-AA5Z2X5 72 aa-0.42□□□□□ -2.48
CTK1YKL139W RPL39P04650 51 aa-0.44□□□□□ -2.48
CTK1YKL139W YHR050W-AQ05451 56 aa-0.45□□□□□ -2.48
CTK1YKL139W YMR105W-AQ8TGS8 64 aa-0.46□□□□□ -2.48
CTK1YKL139W Q0017Q9ZZX8 53 aa-0.52□□□□□ -2.49
CTK1YKL139W TOM7P53507 60 aa-0.53□□□□□ -2.49
CTK1YKL139W YLL066W-BQ8TGJ7 56 aa-0.57□□□□□ -2.5
CTK1YKL139W NCE101Q02820 53 aa-0.64□□□□□ -2.51
CTK1YKL139W YOR316C-AQ3E806 69 aa-0.66□□□□□ -2.52
CTK1YKL139W YML054C-AQ3E809 52 aa-0.71□□□□□ -2.52
CTK1YKL139W YHR073W-AP0C5N7 58 aa-0.74□□□□□ -2.53
CTK1YKL139W RPL29P05747 59 aaPredicted RBP-0.87□□□□□ -2.55
CTK1YKL139W PMP3P87284 55 aa-0.92□□□□□ -2.56
CTK1YKL139W DDR2P89113 61 aa-0.94□□□□□ -2.56
CTK1YKL139W YJL133C-AQ3E7A3 74 aa-0.94□□□□□ -2.56
CTK1YKL139W COX9P07255 59 aa-0.95□□□□□ -2.56
CTK1YKL139W YLR342W-AQ3E810 57 aa-0.99□□□□□ -2.57
CTK1YKL139W YJL127C-BQ3E828 52 aa-1.09□□□□□ -2.58
CTK1YKL139W SMX2P40204 77 aaKnown RBP-1.21□□□□□ -2.6
Retrieved 63 of 5,963 RNA–protein pairs in 5 ms