RNA–Protein interactions for RNA: YKL012W

PRP40, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP40, Length 1,752 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP40YKL012W RPL43AP0CX25 92 aaKnown RBP2.46□□□□□ -2.02
PRP40YKL012W RPL43BP0CX26 92 aa2.46□□□□□ -2.02
PRP40YKL012W MVB12P42939 101 aa2.46□□□□□ -2.02
PRP40YKL012W SPC1P46965 94 aa2.46□□□□□ -2.02
PRP40YKL012W RPL37AP49166 88 aaKnown RBP2.46□□□□□ -2.02
PRP40YKL012W YHR213W-BQ8TGK1 99 aa2.46□□□□□ -2.02
PRP40YKL012W YJL197C-AP0C5P0 93 aa2.44□□□□□ -2.02
PRP40YKL012W YJL127C-BQ3E828 52 aa2.44□□□□□ -2.02
PRP40YKL012W YJL133C-AQ3E7A3 74 aa2.44□□□□□ -2.02
PRP40YKL012W YBR230W-AQ3E762 66 aa2.43□□□□□ -2.02
PRP40YKL012W DYN1P36022 4092 aa2.43□□□□□ -2.02
PRP40YKL012W YDR010CQ12426 110 aa2.42□□□□□ -2.02
PRP40YKL012W YBL039W-BP0C268 59 aa2.41□□□□□ -2.02
PRP40YKL012W YCR095W-AQ3E787 52 aa2.41□□□□□ -2.02
PRP40YKL012W HUB1Q6Q546 73 aa2.41□□□□□ -2.02
PRP40YKL012W RPC10P40422 70 aa2.41□□□□□ -2.02
PRP40YKL012W YLR157W-DP0CE99 70 aa2.4□□□□□ -2.03
PRP40YKL012W HHY1P39982 102 aa2.4□□□□□ -2.03
PRP40YKL012W YGR240C-AQ3E786 66 aa2.4□□□□□ -2.03
PRP40YKL012W YIL156W-BQ2V2P4 73 aa2.39□□□□□ -2.03
PRP40YKL012W SDH6Q3E785 79 aa2.39□□□□□ -2.03
PRP40YKL012W YMR001C-AQ8TGS9 76 aa2.39□□□□□ -2.03
PRP40YKL012W YNL042W-BQ3E7Z2 85 aa2.38□□□□□ -2.03
PRP40YKL012W YLR307C-AQ3E825 87 aa2.38□□□□□ -2.03
PRP40YKL012W CUP1-1P0CX80 61 aa2.36□□□□□ -2.03
PRP40YKL012W CUP1-2P0CX81 61 aa2.36□□□□□ -2.03
PRP40YKL012W AUA1P32450 94 aa2.36□□□□□ -2.03
PRP40YKL012W YLL066W-BQ8TGJ7 56 aa2.36□□□□□ -2.03
PRP40YKL012W Q0032Q9ZZX7 96 aa2.36□□□□□ -2.03
PRP40YKL012W BSC4P53841 131 aa2.35□□□□□ -2.03
PRP40YKL012W DDR2P89113 61 aa2.34□□□□□ -2.03
PRP40YKL012W ATP17Q06405 101 aa2.33□□□□□ -2.04
PRP40YKL012W SNA2P56508 79 aa2.31□□□□□ -2.04
PRP40YKL012W SGF11Q03067 99 aa2.31□□□□□ -2.04
PRP40YKL012W MRX7P53869 86 aa2.31□□□□□ -2.04
PRP40YKL012W YGL041C-BQ3E750 60 aa2.29□□□□□ -2.04
PRP40YKL012W RPL37BP51402 88 aaKnown RBP2.26□□□□□ -2.05
PRP40YKL012W YJR128WP47162 119 aa2.24□□□□□ -2.05
PRP40YKL012W YBR201C-AQ2V2Q3 67 aa2.24□□□□□ -2.05
PRP40YKL012W YOL097W-AQ3E7Y9 61 aa2.23□□□□□ -2.05
PRP40YKL012W YLR255CO13574 117 aa2.22□□□□□ -2.05
PRP40YKL012W YGR146C-AQ8TGT9 53 aa2.22□□□□□ -2.05
PRP40YKL012W YHR073W-AP0C5N7 58 aa2.17□□□□□ -2.06
PRP40YKL012W YOR316C-AQ3E806 69 aa2.17□□□□□ -2.06
PRP40YKL012W YDR034C-AP0C289 58 aa2.16□□□□□ -2.06
PRP40YKL012W OLI1P61829 76 aa2.15□□□□□ -2.06
PRP40YKL012W LCL1Q02786 101 aa2.15□□□□□ -2.06
PRP40YKL012W YBR016WP38216 128 aa2.12□□□□□ -2.07
PRP40YKL012W YCR108CQ3E819 63 aa2.11□□□□□ -2.07
PRP40YKL012W YDR210WQ03482 75 aa2.1□□□□□ -2.07
PRP40YKL012W YOR394C-AQ8TGJ0 55 aa2.1□□□□□ -2.07
PRP40YKL012W YBL044WP38194 122 aa2.09□□□□□ -2.07
PRP40YKL012W MDN1Q12019 4910 aaKnown RBP2.06□□□□□ -2.08
PRP40YKL012W COX7P10174 60 aa2.02□□□□□ -2.09
PRP40YKL012W YLR157W-EP0CF00 54 aa1.99□□□□□ -2.09
PRP40YKL012W YBR072C-AQ3E794 53 aa1.91□□□□□ -2.1
PRP40YKL012W YOR072W-BQ3E832 53 aa1.9□□□□□ -2.11
PRP40YKL012W YML054C-AQ3E809 52 aa1.8□□□□□ -2.12
PRP40YKL012W Q0017Q9ZZX8 53 aa1.76□□□□□ -2.13
PRP40YKL012W YOL164W-AQ3E7A5 60 aa1.69□□□□□ -2.14
PRP40YKL012W RPS29BP41058 56 aaKnown RBP1.54□□□□□ -2.16
PRP40YKL012W YHR050W-AQ05451 56 aa1.49□□□□□ -2.17
PRP40YKL012W RPS29AP41057 56 aaKnown RBP1.35□□□□□ -2.19
Retrieved 63 of 5,963 RNA–protein pairs in 69.4 ms