RNA–Protein interactions for RNA: YJR005W

APL1, Transcript of Beta-adaptin, yeastyeast

Gene APL1, Length 2,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
APL1YJR005W PMP3P87284 55 aa0.69□□□□□ -2.3
APL1YJR005W YOR394C-AQ8TGJ0 55 aa0.69□□□□□ -2.3
APL1YJR005W OLI1P61829 76 aa0.68□□□□□ -2.3
APL1YJR005W YBR230W-AQ3E762 66 aa0.68□□□□□ -2.3
APL1YJR005W TOR1P35169 2470 aa0.68□□□□□ -2.3
APL1YJR005W POL2P21951 2222 aaKnown RBP0.68□□□□□ -2.3
APL1YJR005W RPL29P05747 59 aaPredicted RBP0.68□□□□□ -2.3
APL1YJR005W RPS27AP35997 82 aaKnown RBP0.68□□□□□ -2.3
APL1YJR005W RPS27BP38711 82 aa0.68□□□□□ -2.3
APL1YJR005W RPC10P40422 70 aa0.68□□□□□ -2.3
APL1YJR005W DDR2P89113 61 aa0.68□□□□□ -2.3
APL1YJR005W URA2P07259 2214 aaKnown RBP0.67□□□□□ -2.3
APL1YJR005W RDS3Q06835 107 aaPredicted RBP0.67□□□□□ -2.3
APL1YJR005W YCR108CQ3E819 63 aa0.67□□□□□ -2.3
APL1YJR005W YLR307C-AQ3E825 87 aa0.67□□□□□ -2.3
APL1YJR005W YJL009WP47078 108 aa0.66□□□□□ -2.3
APL1YJR005W YNL146C-AQ3E7Z1 64 aa0.66□□□□□ -2.3
APL1YJR005W YGR146C-AQ8TGT9 53 aa0.66□□□□□ -2.3
APL1YJR005W RPL39P04650 51 aa0.65□□□□□ -2.3
APL1YJR005W YMR105W-AQ8TGS8 64 aa0.65□□□□□ -2.3
APL1YJR005W RPL37BP51402 88 aaKnown RBP0.64□□□□□ -2.31
APL1YJR005W HOR7Q05827 59 aa0.64□□□□□ -2.31
APL1YJR005W HHY1P39982 102 aa0.63□□□□□ -2.31
APL1YJR005W YBR016WP38216 128 aa0.62□□□□□ -2.31
APL1YJR005W YBR072C-AQ3E794 53 aa0.62□□□□□ -2.31
APL1YJR005W YOR316C-AQ3E806 69 aa0.62□□□□□ -2.31
APL1YJR005W YHR212W-AP0CX91 67 aa0.61□□□□□ -2.31
APL1YJR005W HFA1P32874 2273 aa0.61□□□□□ -2.31
APL1YJR005W YHR073W-AP0C5N7 58 aa0.6□□□□□ -2.31
APL1YJR005W YIL046W-AQ3E7Z4 54 aa0.6□□□□□ -2.31
APL1YJR005W GCN1P33892 2672 aaKnown RBP0.6□□□□□ -2.31
APL1YJR005W VPS13Q07878 3144 aa0.6□□□□□ -2.31
APL1YJR005W YHR086W-AQ3E746 53 aa0.59□□□□□ -2.31
APL1YJR005W TAO3P40468 2376 aa0.59□□□□□ -2.32
APL1YJR005W YDR034C-AP0C289 58 aa0.59□□□□□ -2.32
APL1YJR005W YOL164W-AQ3E7A5 60 aa0.59□□□□□ -2.32
APL1YJR005W YOR072W-BQ3E832 53 aa0.59□□□□□ -2.32
APL1YJR005W PRP8P33334 2413 aaKnown RBP0.59□□□□□ -2.32
APL1YJR005W RPL37AP49166 88 aaKnown RBP0.58□□□□□ -2.32
APL1YJR005W TRA1P38811 3744 aa0.58□□□□□ -2.32
APL1YJR005W IRA2P19158 3079 aa0.58□□□□□ -2.32
APL1YJR005W MEC1P38111 2368 aa0.57□□□□□ -2.32
APL1YJR005W CUP1-1P0CX80 61 aa0.56□□□□□ -2.32
APL1YJR005W CUP1-2P0CX81 61 aa0.56□□□□□ -2.32
APL1YJR005W YDR524C-BQ3E6R4 66 aa0.56□□□□□ -2.32
APL1YJR005W CSF1Q12150 2958 aa0.56□□□□□ -2.32
APL1YJR005W IRA1P18963 3092 aa0.56□□□□□ -2.32
APL1YJR005W TOM1Q03280 3268 aa0.56□□□□□ -2.32
APL1YJR005W YLL066W-BQ8TGJ7 56 aa0.55□□□□□ -2.32
APL1YJR005W UTP20P35194 2493 aaKnown RBP0.54□□□□□ -2.32
APL1YJR005W MDN1Q12019 4910 aaKnown RBP0.54□□□□□ -2.32
APL1YJR005W YLR157W-EP0CF00 54 aa0.53□□□□□ -2.32
APL1YJR005W FMP27Q06179 2628 aa0.52□□□□□ -2.33
APL1YJR005W YML054C-AQ3E809 52 aa0.5□□□□□ -2.33
APL1YJR005W TOR2P32600 2474 aaKnown RBP0.5□□□□□ -2.33
APL1YJR005W TEL1P38110 2787 aa0.5□□□□□ -2.33
APL1YJR005W Q0017Q9ZZX8 53 aa0.47□□□□□ -2.33
APL1YJR005W Q0297Q9ZZV8 51 aa0.47□□□□□ -2.33
APL1YJR005W DYN1P36022 4092 aa0.46□□□□□ -2.34
APL1YJR005W YHR050W-AQ05451 56 aa0.45□□□□□ -2.34
APL1YJR005W RPS29BP41058 56 aaKnown RBP0.44□□□□□ -2.34
APL1YJR005W RPS29AP41057 56 aaKnown RBP0.43□□□□□ -2.34
APL1YJR005W YDR034W-BQ6Q5X2 51 aa0.38□□□□□ -2.35
Retrieved 63 of 5,963 RNA–protein pairs in 9.7 ms