RNA–Protein interactions for RNA: YJL197W

UBP12, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP12, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP12YJL197W YDR524C-BQ3E6R4 66 aa1.5□□□□□ -2.17
UBP12YJL197W YBR200W-AQ3E755 54 aa1.49□□□□□ -2.17
UBP12YJL197W VPS13Q07878 3144 aa1.49□□□□□ -2.17
UBP12YJL197W YOR011W-AQ3E807 68 aa1.49□□□□□ -2.17
UBP12YJL197W TOR2P32600 2474 aaKnown RBP1.48□□□□□ -2.17
UBP12YJL197W YKL023C-AQ2V2P3 75 aa1.47□□□□□ -2.17
UBP12YJL197W YOR394C-AQ8TGJ0 55 aa1.45□□□□□ -2.18
UBP12YJL197W YBR016WP38216 128 aa1.44□□□□□ -2.18
UBP12YJL197W YOL166W-AQ8TGJ1 51 aa1.43□□□□□ -2.18
UBP12YJL197W YMR001C-AQ8TGS9 76 aa1.43□□□□□ -2.18
UBP12YJL197W YLR157W-DP0CE99 70 aa1.42□□□□□ -2.18
UBP12YJL197W DYN1P36022 4092 aa1.42□□□□□ -2.18
UBP12YJL197W PRP8P33334 2413 aaKnown RBP1.41□□□□□ -2.18
UBP12YJL197W SEN1Q00416 2231 aaKnown RBP1.4□□□□□ -2.18
UBP12YJL197W RPS29BP41058 56 aaKnown RBP1.4□□□□□ -2.19
UBP12YJL197W FMP27Q06179 2628 aa1.39□□□□□ -2.19
UBP12YJL197W RPS27AP35997 82 aaKnown RBP1.39□□□□□ -2.19
UBP12YJL197W YGR025WP53216 100 aa1.37□□□□□ -2.19
UBP12YJL197W MDN1Q12019 4910 aaKnown RBP1.37□□□□□ -2.19
UBP12YJL197W IRA1P18963 3092 aa1.36□□□□□ -2.19
UBP12YJL197W SIP18P50263 79 aa1.36□□□□□ -2.19
UBP12YJL197W YBL044WP38194 122 aa1.34□□□□□ -2.19
UBP12YJL197W YOR192C-CQ3E736 78 aa1.34□□□□□ -2.19
UBP12YJL197W YIL046W-AQ3E7Z4 54 aa1.34□□□□□ -2.19
UBP12YJL197W UTP20P35194 2493 aaKnown RBP1.34□□□□□ -2.2
UBP12YJL197W IRA2P19158 3079 aa1.34□□□□□ -2.2
UBP12YJL197W SMX2P40204 77 aaKnown RBP1.33□□□□□ -2.2
UBP12YJL197W YBR230W-AQ3E762 66 aa1.32□□□□□ -2.2
UBP12YJL197W YBR056W-AI2HB52 66 aa1.28□□□□□ -2.2
UBP12YJL197W YOR008C-AQ3E7B9 74 aa1.27□□□□□ -2.21
UBP12YJL197W TRA1P38811 3744 aa1.25□□□□□ -2.21
UBP12YJL197W CSF1Q12150 2958 aa1.24□□□□□ -2.21
UBP12YJL197W YCR108CQ3E819 63 aa1.22□□□□□ -2.21
UBP12YJL197W RPS27BP38711 82 aa1.21□□□□□ -2.22
UBP12YJL197W MEC1P38111 2368 aa1.18□□□□□ -2.22
UBP12YJL197W TOS6P48560 102 aa1.18□□□□□ -2.22
UBP12YJL197W YGR146C-AQ8TGT9 53 aa1.18□□□□□ -2.22
UBP12YJL197W YPR010C-AA5Z2X5 72 aa1.16□□□□□ -2.22
UBP12YJL197W COA2Q3E823 68 aa1.11□□□□□ -2.23
UBP12YJL197W Q0297Q9ZZV8 51 aa1.09□□□□□ -2.23
UBP12YJL197W YLL006W-AQ3E814 58 aa1.03□□□□□ -2.24
UBP12YJL197W COX9P07255 59 aa1.03□□□□□ -2.25
UBP12YJL197W YGL258W-AQ3E740 77 aa1.03□□□□□ -2.25
UBP12YJL197W YOR072W-BQ3E832 53 aa1□□□□□ -2.25
UBP12YJL197W RPS29AP41057 56 aaKnown RBP0.96□□□□□ -2.26
UBP12YJL197W TOM7P53507 60 aa0.88□□□□□ -2.27
UBP12YJL197W YLR342W-AQ3E810 57 aa0.86□□□□□ -2.27
UBP12YJL197W YOR316C-AQ3E806 69 aa0.86□□□□□ -2.27
UBP12YJL197W YJL133C-AQ3E7A3 74 aa0.85□□□□□ -2.27
UBP12YJL197W RPL29P05747 59 aaPredicted RBP0.83□□□□□ -2.28
UBP12YJL197W DDR2P89113 61 aa0.81□□□□□ -2.28
UBP12YJL197W NCE101Q02820 53 aa0.78□□□□□ -2.28
UBP12YJL197W HOR7Q05827 59 aa0.75□□□□□ -2.29
UBP12YJL197W YDR034C-AP0C289 58 aa0.71□□□□□ -2.3
UBP12YJL197W YHR073W-AP0C5N7 58 aa0.71□□□□□ -2.3
UBP12YJL197W YJL127C-BQ3E828 52 aa0.71□□□□□ -2.3
UBP12YJL197W YHR050W-AQ05451 56 aa0.69□□□□□ -2.3
UBP12YJL197W YMR105W-AQ8TGS8 64 aa0.67□□□□□ -2.3
UBP12YJL197W RPL39P04650 51 aa0.66□□□□□ -2.3
UBP12YJL197W PMP3P87284 55 aa0.63□□□□□ -2.31
UBP12YJL197W YLL066W-BQ8TGJ7 56 aa0.63□□□□□ -2.31
UBP12YJL197W YML054C-AQ3E809 52 aa0.51□□□□□ -2.33
UBP12YJL197W Q0017Q9ZZX8 53 aa0.51□□□□□ -2.33
Retrieved 63 of 5,963 RNA–protein pairs in 40.4 ms