RNA–Protein interactions for RNA: YJL154C

VPS35, Transcript of Endosomal subunit of membrane-associated retromer complex, yeastyeast

Gene VPS35, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS35YJL154C YBL039W-BP0C268 59 aa0.97□□□□□ -2.25
VPS35YJL154C YMR141CP40211 102 aa0.97□□□□□ -2.25
VPS35YJL154C YOL013W-AP0C272 63 aaPredicted RBP0.97□□□□□ -2.25
VPS35YJL154C COX7P10174 60 aa0.97□□□□□ -2.25
VPS35YJL154C YIL102CP40488 101 aa0.97□□□□□ -2.25
VPS35YJL154C YJR128WP47162 119 aa0.97□□□□□ -2.25
VPS35YJL154C YHR212W-AP0CX91 67 aa0.97□□□□□ -2.25
VPS35YJL154C Q0297Q9ZZV8 51 aa0.97□□□□□ -2.25
VPS35YJL154C RPL38P49167 78 aaKnown RBP0.96□□□□□ -2.26
VPS35YJL154C YBR200W-AQ3E755 54 aa0.96□□□□□ -2.26
VPS35YJL154C RPC10P40422 70 aa0.96□□□□□ -2.26
VPS35YJL154C YAR064WP39563 99 aa0.94□□□□□ -2.26
VPS35YJL154C YOR011W-AQ3E807 68 aa0.94□□□□□ -2.26
VPS35YJL154C HHY1P39982 102 aa0.93□□□□□ -2.26
VPS35YJL154C YPR010C-AA5Z2X5 72 aa0.93□□□□□ -2.26
VPS35YJL154C YOR394C-AQ8TGJ0 55 aa0.92□□□□□ -2.26
VPS35YJL154C YGR025WP53216 100 aa0.92□□□□□ -2.26
VPS35YJL154C COA2Q3E823 68 aa0.92□□□□□ -2.26
VPS35YJL154C TOS6P48560 102 aa0.91□□□□□ -2.26
VPS35YJL154C YBR072C-AQ3E794 53 aa0.91□□□□□ -2.26
VPS35YJL154C AUA1P32450 94 aa0.9□□□□□ -2.26
VPS35YJL154C HUA1P40325 198 aa0.9□□□□□ -2.26
VPS35YJL154C RPS27AP35997 82 aaKnown RBP0.89□□□□□ -2.27
VPS35YJL154C YFR009W-AP0C5M9 85 aa0.89□□□□□ -2.27
VPS35YJL154C OLI1P61829 76 aa0.89□□□□□ -2.27
VPS35YJL154C YBR230W-AQ3E762 66 aa0.88□□□□□ -2.27
VPS35YJL154C RPL37AP49166 88 aaKnown RBP0.88□□□□□ -2.27
VPS35YJL154C YHR213W-BQ8TGK1 99 aa0.87□□□□□ -2.27
VPS35YJL154C COX9P07255 59 aa0.87□□□□□ -2.27
VPS35YJL154C TOM7P53507 60 aa0.86□□□□□ -2.27
VPS35YJL154C SIP18P50263 79 aa0.86□□□□□ -2.27
VPS35YJL154C YOR008C-AQ3E7B9 74 aa0.86□□□□□ -2.27
VPS35YJL154C YLR342W-AQ3E810 57 aa0.85□□□□□ -2.27
VPS35YJL154C YCR108CQ3E819 63 aa0.85□□□□□ -2.27
VPS35YJL154C YBL044WP38194 122 aa0.85□□□□□ -2.27
VPS35YJL154C RPS27BP38711 82 aa0.85□□□□□ -2.27
VPS35YJL154C YOL164W-AQ3E7A5 60 aa0.84□□□□□ -2.28
VPS35YJL154C YJL133C-AQ3E7A3 74 aa0.83□□□□□ -2.28
VPS35YJL154C RPL37BP51402 88 aaKnown RBP0.83□□□□□ -2.28
VPS35YJL154C YGR146C-AQ8TGT9 53 aa0.82□□□□□ -2.28
VPS35YJL154C YBR016WP38216 128 aa0.82□□□□□ -2.28
VPS35YJL154C YLR157W-EP0CF00 54 aa0.8□□□□□ -2.28
VPS35YJL154C YLL006W-AQ3E814 58 aa0.8□□□□□ -2.28
VPS35YJL154C YLR307C-AQ3E825 87 aa0.8□□□□□ -2.28
VPS35YJL154C DDR2P89113 61 aa0.78□□□□□ -2.28
VPS35YJL154C YGL258W-AQ3E740 77 aa0.76□□□□□ -2.29
VPS35YJL154C YJL127C-BQ3E828 52 aa0.76□□□□□ -2.29
VPS35YJL154C RPL29P05747 59 aaPredicted RBP0.75□□□□□ -2.29
VPS35YJL154C YOR316C-AQ3E806 69 aa0.74□□□□□ -2.29
VPS35YJL154C RPS29AP41057 56 aaKnown RBP0.71□□□□□ -2.3
VPS35YJL154C YOR072W-BQ3E832 53 aa0.71□□□□□ -2.3
VPS35YJL154C PMP3P87284 55 aa0.69□□□□□ -2.3
VPS35YJL154C NCE101Q02820 53 aa0.69□□□□□ -2.3
VPS35YJL154C YDR034C-AP0C289 58 aa0.67□□□□□ -2.3
VPS35YJL154C YHR073W-AP0C5N7 58 aa0.66□□□□□ -2.3
VPS35YJL154C RPS29BP41058 56 aaKnown RBP0.65□□□□□ -2.31
VPS35YJL154C HOR7Q05827 59 aa0.65□□□□□ -2.31
VPS35YJL154C YMR105W-AQ8TGS8 64 aa0.61□□□□□ -2.31
VPS35YJL154C RPL39P04650 51 aa0.6□□□□□ -2.31
VPS35YJL154C YML054C-AQ3E809 52 aa0.54□□□□□ -2.32
VPS35YJL154C YLL066W-BQ8TGJ7 56 aa0.53□□□□□ -2.32
VPS35YJL154C YHR050W-AQ05451 56 aa0.52□□□□□ -2.33
VPS35YJL154C Q0017Q9ZZX8 53 aa0.52□□□□□ -2.33
Retrieved 63 of 5,963 RNA–protein pairs in 7.5 ms