RNA–Protein interactions for RNA: YIR040C

YIR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YIR040C, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR040CYIR040C BEM2P39960 2167 aaKnown RBP1.95□□□□□ -2.1
YIR040CYIR040C YGR146C-AQ8TGT9 53 aa1.94□□□□□ -2.1
YIR040CYIR040C FAB1P34756 2278 aa1.94□□□□□ -2.1
YIR040CYIR040C SEN1Q00416 2231 aaKnown RBP1.94□□□□□ -2.1
YIR040CYIR040C SEC16P48415 2195 aaKnown RBP1.93□□□□□ -2.1
YIR040CYIR040C YBR072C-AQ3E794 53 aa1.93□□□□□ -2.1
YIR040CYIR040C RPS27AP35997 82 aaKnown RBP1.92□□□□□ -2.1
YIR040CYIR040C HOR7Q05827 59 aa1.92□□□□□ -2.1
YIR040CYIR040C RPL37BP51402 88 aaKnown RBP1.91□□□□□ -2.1
YIR040CYIR040C RPC10P40422 70 aa1.9□□□□□ -2.11
YIR040CYIR040C RPS27BP38711 82 aa1.88□□□□□ -2.11
YIR040CYIR040C HHY1P39982 102 aa1.88□□□□□ -2.11
YIR040CYIR040C YOR316C-AQ3E806 69 aa1.88□□□□□ -2.11
YIR040CYIR040C YCR108CQ3E819 63 aa1.88□□□□□ -2.11
YIR040CYIR040C YBL044WP38194 122 aa1.87□□□□□ -2.11
YIR040CYIR040C RPL43AP0CX25 92 aaKnown RBP1.85□□□□□ -2.11
YIR040CYIR040C RPL43BP0CX26 92 aa1.85□□□□□ -2.11
YIR040CYIR040C URA2P07259 2214 aaKnown RBP1.85□□□□□ -2.11
YIR040CYIR040C POL2P21951 2222 aaKnown RBP1.85□□□□□ -2.11
YIR040CYIR040C YBR016WP38216 128 aa1.84□□□□□ -2.11
YIR040CYIR040C YHR073W-AP0C5N7 58 aa1.82□□□□□ -2.12
YIR040CYIR040C YHR212W-AP0CX91 67 aa1.81□□□□□ -2.12
YIR040CYIR040C YMR105W-AQ8TGS8 64 aa1.81□□□□□ -2.12
YIR040CYIR040C YHR086W-AQ3E746 53 aa1.8□□□□□ -2.12
YIR040CYIR040C YDR524C-BQ3E6R4 66 aa1.76□□□□□ -2.13
YIR040CYIR040C YOR072W-BQ3E832 53 aa1.76□□□□□ -2.13
YIR040CYIR040C HFA1P32874 2273 aa1.75□□□□□ -2.13
YIR040CYIR040C RPL37AP49166 88 aaKnown RBP1.74□□□□□ -2.13
YIR040CYIR040C RPL39P04650 51 aa1.72□□□□□ -2.13
YIR040CYIR040C YDR034C-AP0C289 58 aa1.7□□□□□ -2.14
YIR040CYIR040C YIL046W-AQ3E7Z4 54 aa1.64□□□□□ -2.15
YIR040CYIR040C YOL164W-AQ3E7A5 60 aa1.62□□□□□ -2.15
YIR040CYIR040C YLL066W-BQ8TGJ7 56 aa1.6□□□□□ -2.15
YIR040CYIR040C YLR157W-EP0CF00 54 aa1.55□□□□□ -2.16
YIR040CYIR040C YML054C-AQ3E809 52 aa1.53□□□□□ -2.16
YIR040CYIR040C TAO3P40468 2376 aa1.52□□□□□ -2.17
YIR040CYIR040C MEC1P38111 2368 aa1.51□□□□□ -2.17
YIR040CYIR040C Q0017Q9ZZX8 53 aa1.43□□□□□ -2.18
YIR040CYIR040C RPS29AP41057 56 aaKnown RBP1.42□□□□□ -2.18
YIR040CYIR040C RPS29BP41058 56 aaKnown RBP1.42□□□□□ -2.18
YIR040CYIR040C PRP8P33334 2413 aaKnown RBP1.39□□□□□ -2.19
YIR040CYIR040C YHR050W-AQ05451 56 aa1.36□□□□□ -2.19
YIR040CYIR040C IRA2P19158 3079 aa1.34□□□□□ -2.2
YIR040CYIR040C VPS13Q07878 3144 aa1.32□□□□□ -2.2
YIR040CYIR040C GCN1P33892 2672 aaKnown RBP1.3□□□□□ -2.2
YIR040CYIR040C CSF1Q12150 2958 aa1.28□□□□□ -2.2
YIR040CYIR040C Q0297Q9ZZV8 51 aa1.27□□□□□ -2.21
YIR040CYIR040C TOM1Q03280 3268 aa1.27□□□□□ -2.21
YIR040CYIR040C UTP20P35194 2493 aaKnown RBP1.24□□□□□ -2.21
YIR040CYIR040C IRA1P18963 3092 aa1.23□□□□□ -2.21
YIR040CYIR040C TOR1P35169 2470 aa1.2□□□□□ -2.22
YIR040CYIR040C FMP27Q06179 2628 aa1.18□□□□□ -2.22
YIR040CYIR040C TOR2P32600 2474 aaKnown RBP1.16□□□□□ -2.22
YIR040CYIR040C TRA1P38811 3744 aa1.14□□□□□ -2.23
YIR040CYIR040C YPR117WQ06116 2489 aa1.12□□□□□ -2.23
YIR040CYIR040C NUM1Q00402 2748 aa1.1□□□□□ -2.23
YIR040CYIR040C TEL1P38110 2787 aa1.08□□□□□ -2.24
YIR040CYIR040C YDR034W-BQ6Q5X2 51 aa1.04□□□□□ -2.24
YIR040CYIR040C YBR056W-AI2HB52 66 aa1.01□□□□□ -2.25
YIR040CYIR040C CUP1-1P0CX80 61 aa1.01□□□□□ -2.25
YIR040CYIR040C CUP1-2P0CX81 61 aa1.01□□□□□ -2.25
YIR040CYIR040C DYN1P36022 4092 aa0.98□□□□□ -2.25
YIR040CYIR040C MDN1Q12019 4910 aaKnown RBP0.7□□□□□ -2.3
Retrieved 63 of 5,963 RNA–protein pairs in 5.5 ms