RNA–Protein interactions for RNA: YIL123W

SIM1, Transcript of Protein of the SUN family (Sim1p, Uth1p, Nca3p, Sun4p), yeastyeast

Gene SIM1, Length 1,431 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIM1YIL123W HHF1P02309 103 aaKnown RBP6.68□□□□□ -1.34
SIM1YIL123W YOR316C-AQ3E806 69 aa6.67□□□□□ -1.34
SIM1YIL123W YJR128WP47162 119 aa6.67□□□□□ -1.34
SIM1YIL123W YGR164WP53291 111 aa6.67□□□□□ -1.34
SIM1YIL123W YNL122CP53921 115 aaPredicted RBP6.61□□□□□ -1.35
SIM1YIL123W SDH6Q3E785 79 aa6.59□□□□□ -1.35
SIM1YIL123W YGR146C-AQ8TGT9 53 aa6.59□□□□□ -1.35
SIM1YIL123W YLR255CO13574 117 aa6.58□□□□□ -1.36
SIM1YIL123W YKL065W-AQ2V2P2 73 aa6.54□□□□□ -1.36
SIM1YIL123W YFR032C-BQ8TGU2 87 aa6.54□□□□□ -1.36
SIM1YIL123W COX8P04039 78 aa6.51□□□□□ -1.37
SIM1YIL123W CMC4Q3E7A9 73 aa6.5□□□□□ -1.37
SIM1YIL123W YMR001C-AQ8TGS9 76 aa6.5□□□□□ -1.37
SIM1YIL123W YJL144WP47009 104 aa6.45□□□□□ -1.38
SIM1YIL123W HUB1Q6Q546 73 aa6.45□□□□□ -1.38
SIM1YIL123W OST5Q92316 86 aa6.44□□□□□ -1.38
SIM1YIL123W YBR016WP38216 128 aa6.43□□□□□ -1.38
SIM1YIL123W YBL008W-AQ3E821 79 aa6.42□□□□□ -1.38
SIM1YIL123W SBH1P52870 82 aa6.41□□□□□ -1.38
SIM1YIL123W YOR381W-AQ3E804 55 aa6.39□□□□□ -1.39
SIM1YIL123W YMR122CQ03879 124 aa6.38□□□□□ -1.39
SIM1YIL123W YBR201C-AQ2V2Q3 67 aa6.37□□□□□ -1.39
SIM1YIL123W OLI1P61829 76 aa6.36□□□□□ -1.39
SIM1YIL123W YIL156W-BQ2V2P4 73 aa6.33□□□□□ -1.4
SIM1YIL123W MRX7P53869 86 aa6.3□□□□□ -1.4
SIM1YIL123W RPL37BP51402 88 aaKnown RBP6.27□□□□□ -1.41
SIM1YIL123W YER188C-AP0C0V2 99 aa6.25□□□□□ -1.41
SIM1YIL123W YCR095W-AQ3E787 52 aa6.18□□□□□ -1.42
SIM1YIL123W Q0017Q9ZZX8 53 aa6.15□□□□□ -1.43
SIM1YIL123W FYV12Q08559 129 aa6.14□□□□□ -1.43
SIM1YIL123W YLR412C-AQ3E742 68 aa6.14□□□□□ -1.43
SIM1YIL123W YGL034CP53186 121 aa6.06□□□□□ -1.44
SIM1YIL123W ATP17Q06405 101 aa6.06□□□□□ -1.44
SIM1YIL123W YJL009WP47078 108 aa6.02□□□□□ -1.45
SIM1YIL123W YBL044WP38194 122 aa5.93□□□□□ -1.46
SIM1YIL123W YBR121C-AP0C5L4 52 aa5.91□□□□□ -1.46
SIM1YIL123W YOR394C-AQ8TGJ0 55 aa5.9□□□□□ -1.47
SIM1YIL123W YML054C-AQ3E809 52 aa5.89□□□□□ -1.47
SIM1YIL123W RPS28BP0C0X0 67 aaKnown RBP5.87□□□□□ -1.47
SIM1YIL123W RPS28AQ3E7X9 67 aaPredicted RBP5.87□□□□□ -1.47
SIM1YIL123W YDR210WQ03482 75 aa5.82□□□□□ -1.48
SIM1YIL123W YNL277W-AQ3E7Z0 62 aa5.77□□□□□ -1.49
SIM1YIL123W YEL014CP39999 101 aa5.76□□□□□ -1.49
SIM1YIL123W YCR108CQ3E819 63 aa5.76□□□□□ -1.49
SIM1YIL123W RPL37AP49166 88 aaKnown RBP5.66□□□□□ -1.5
SIM1YIL123W QCR10P37299 77 aa5.65□□□□□ -1.5
SIM1YIL123W YGL014C-AP0C5N1 53 aa5.55□□□□□ -1.52
SIM1YIL123W YML100W-AQ8TGT0 57 aa5.48□□□□□ -1.53
SIM1YIL123W YOR072W-BQ3E832 53 aa5.43□□□□□ -1.54
SIM1YIL123W YOR376W-AQ3E805 51 aa5.41□□□□□ -1.54
SIM1YIL123W SOM1Q05676 74 aa5.33□□□□□ -1.56
SIM1YIL123W HHY1P39982 102 aa5.19□□□□□ -1.58
SIM1YIL123W YBR072C-AQ3E794 53 aa5.11□□□□□ -1.59
SIM1YIL123W RPS29BP41058 56 aaKnown RBP4.92□□□□□ -1.62
SIM1YIL123W RPS29AP41057 56 aaKnown RBP4.71□□□□□ -1.66
SIM1YIL123W YER175W-AQ8TGU4 54 aa4.63□□□□□ -1.67
SIM1YIL123W YHR050W-AQ05451 56 aa4.41□□□□□ -1.7
SIM1YIL123W YAL067W-AQ8TGK6 75 aa4.04□□□□□ -1.76
SIM1YIL123W YER078W-AQ3E7A2 54 aa3.95□□□□□ -1.78
SIM1YIL123W YOL164W-AQ3E7A5 60 aa3.91□□□□□ -1.78
SIM1YIL123W YHR032W-AP0C5N6 59 aa3.87□□□□□ -1.79
SIM1YIL123W YLR157W-EP0CF00 54 aa3.61□□□□□ -1.83
SIM1YIL123W YHR086W-AQ3E746 53 aa2.99□□□□□ -1.93
Retrieved 63 of 5,963 RNA–protein pairs in 266.3 ms